BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482461
Length=2347
Score E
Sequences producing significant alignments: (Bits) Value
AT2G34970.1 | Symbols: | Trimeric LpxA-like enzyme | chr2:1474... 3483 0.0
AT4G18300.1 | Symbols: | Trimeric LpxA-like enzyme | chr4:1011... 2063 0.0
AT3G02270.1 | Symbols: | Trimeric LpxA-like enzyme | chr3:4489... 669 0.0
> AT2G34970.1 | Symbols: | Trimeric LpxA-like enzyme | chr2:14746307-14748781
FORWARD LENGTH=2475
Length=2475
Score = 3483 bits (1886), Expect = 0.0
Identities = 2232/2391 (93%), Gaps = 56/2391 (2%)
Strand=Plus/Plus
Query 1 GAGGAGATATGGGTGCTCAGAAGAAAGGCGGCG--G-CGCTAGGGTTTCGGAGGATGCGG 57
||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||
Sbjct 26 GAGGAGATATGGGTGCTCAGAAGAAAGGCGGCGCCGCCGCTAGGGTTTCAGAGGATGCGG 85
Query 58 TGGAACAGAGTCGTCAACGATTGCAAGCAATTCTTCTTGCCGATAGCTTCGCCACAAAAT 117
|| ||||||||| || |||||||||||||||||||||||||| || |||||||| ||||
Sbjct 86 AGGTACAGAGTCGCCACCGATTGCAAGCAATTCTTCTTGCCGACAGTTTCGCCACGAAAT 145
Query 118 TTCGTCCCGTAACCCTAGAACGCCCAAAGGTACTATTGCCGATAGTTAATGTTCCGATGA 177
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 146 TTCGTCCCGTAACCCTAGAACGCCCAAAGGTACTGTTACCGATAGTTAATGTTCCGATGA 205
Query 178 TTGATTATACATTGGCATGGCTCGAATCTGCTGGAATAGAGGAGGTTTTCGTCTTCTGTT 237
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 206 TTGATTACACATTGGCATGGCTCGAATCTGCTGGAATAGAGGAGGTTTTCGTCTTCTGTT 265
Query 238 GTGCTCATTCGATGCAGGTTATCGAATATCTGGAGAAGTCCGAGTGGTACTCGCACCCAA 297
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct 266 GTGCTCATTCGATGCAGGTTATCGAATATCTGGAGAAATCCGAGTGGTATTCGCATCCAA 325
Query 298 ACTTGCTTGTGAGAACAATCGAGTCGCATAAATCCATCAGTGCTGGAGATGCTTTGCGTT 357
|||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||
Sbjct 326 ACTTGCTTGTGAGAACGATTGAGTCGCACAAATCCATCAGTGCTGGAGATGCTTTGCGTT 385
Query 358 ACATGTATGAGCAACAGACAGAGACGTCTCAGATTCAAGGTGATTTTGTTCTTGTTAGTG 417
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 386 ACATGTATGAACAACAGACAGAGACGTCTCAGATTCAAGGTGATTTCGTTCTTGTTAGTG 445
Query 418 GAGATACTGTGAGTAATATGCCACTAGCTGATTTGATTAAAGAACATAGAGAGAGGAAGA 477
||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||
Sbjct 446 GAGATACTGTGAGTAATATGCCACTTGCTGATTTGATTCAAGAGCATAGAGAGAGGAAGA 505
Query 478 AGAAAGATGAGAAAGCTATCATGACTATGGTTATTAAGCAGTCTAAATCTTCTCCACTCA 537
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 506 AGAAAGATGAGAAAGCTATTATGACTATGGTTATTAAGCAGTCTAAATCTTCTCCACTTA 565
Query 538 CGCATCAGTCAAGATTAGGAACGGATCAGCTCTTCATTGCTGTAGATCCTTTGACAAAGC 597
|||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct 566 CGCATCAGTCAAGATTAGGAACAGATCAGCTTTTCATTGCTGTTGATCCTTTGACAAAGC 625
Query 598 AGCTTCTTCATTACGAGGAAGATAAGATTGATCATCCAAGTGGGTCAGTTTGTTTAGAGA 657
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 626 AGCTTCTTCATTACGAGGAAGATAAGATTGATCATCCAAGTGGGTCAGTTTGCTTAGAGA 685
Query 658 AGTCATTGTTGGATACTAATCCTTCTGTTTTAGTATGCAATGATATGCAGGATTGCTACA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 686 AGTCATTGTTGGATACTAATCCTTCTGTTTTAGTATGCAATGATATGCAGGATTGCTACA 745
Query 718 TTGACATATGTTCTCCTGAGGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAACATC 777
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 746 TTGACATATGTTCTCCTGAAGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAACATC 805
Query 778 TGCGTCGTCATTTTGTCAAAGGTGTGCTTGTTGATGATATCATGGGTTATAAAATTTTCA 837
||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct 806 TGCGTCGTCATTTTGTCAAAGGTGTGCTTGTGGATGATATTATGGGTTATAAAATCTTCA 865
Query 838 CTCATGAGATTCACTCCAGCTATGCTGGTAGGATTGATAATTTCCGCAGCTATGACACTG 897
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 866 CTCATGAGATTCACTCGAGCTATGCTGGTAGGATTGATAATTTCCGAAGCTATGACACTG 925
Query 898 TTAGCAAGGATATAATTCAGAGGTGGACATATCCTTATGTACCAGATATAAATTTCAGCG 957
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 926 TTAGCAAGGATATAATTCAGAGGTGGACATATCCTTATGTACCAGATATTAATTTCAGTG 985
Query 958 GAAATCGGCCTCTTAAGCTCGGGAGACAAGGGATATACCGGGCTTCTGATGTAGTTCAAT 1017
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 986 GAAATCGGCCTCTAAAGCTCGGGAGACAAGGGATATACAAGGCTTCTGATGTAGTTCAAT 1045
Query 1018 CACGATCTGCTGATGTTGGAGCTTCTACCGTCATTGGATACGGCACGAAAATTGGTAATG 1077
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||
Sbjct 1046 CACGATCTGCTGATGTTGGAGCTTCTACTGTCATTGGATACGGTACGAAAATTGGTCATG 1105
Query 1078 GGGATAAAATC-TCGAACTCGGTTATTGGGAATGGATGTTCTATTGGATCAAATGTCGTG 1136
||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1106 GGGATAAAATCAT-GAACTCGGTTATTGGGAATGGATGCTCTATTGGATCAAATGTGGTG 1164
Query 1137 ATAGAAGGCTCATACATATGGAATAATGTTACGATTGAAGATGGGTGTGAGATAAGGAAC 1196
|| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1165 ATTGAAGGCTCATACATATGGAACAATGTTACTATTGAAGATGGGTGTGAGATAAGGAAC 1224
Query 1197 GCTATTGTCTGTGATGGAGTGAAAATCAGAGCAGGAGCTGTTCTGCAGCCTGGTGTTGTT 1256
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1225 GCTATTGTGTGTGATGGGGTGAAAATCAGAGCAGGAGCTGTTCTGCAGCCTGGTGTTGTT 1284
Query 1257 TTGTCTTTCAATGTTGTAGTTGGGCGGGACTTTGTTGTGCCTGCATACTCAAAGGTTTCC 1316
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1285 TTGTCTTTCAATGTTGTAGTTGGACGGGACTTTGTTGTGCCTGCATACTCAAAGGTTTCC 1344
Query 1317 CTACTTCAACAGCCAACAACAGAAGATAGCGATGAAGAGCTGGAATATGCTGATAGTAGC 1376
||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||
Sbjct 1345 CTACTTCAACAGCCAACGACAGAAGACAGTGATGAAGAGCTGGAATATGCTGATAGTAGC 1404
Query 1377 AGCGGGACTGCAGATCATTTGGCAGGCCTAAATTTGCAAATGGAGTCCAAAGCATCTGAG 1436
||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1405 AGCGGGACTGCGGATCATTTGTCAGGCCTAAATCTGCAAATGGAGTCCAAAGCATCTGAG 1464
Query 1437 CTTGGTCCTGATGGAGCAGGTTACATATGGGAAGCATGTGAAGGGGCTCATGATGAGGAG 1496
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1465 CTTGGTCCTGATGGAGCAGGTTACATATGGGAAGTATGTGAAGGGGCTCATGATGAGGAG 1524
Query 1497 TGGAAGCATTCTGTTGCACCAATCCCGAAGGATAAACTTTCTGAGATTACCCAGGCCATA 1556
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1525 TGGAAGCATTCTGTTGCACCAATCCCCAAGGATAAACTTTCTGAGATTACTCAGGCCATA 1584
Query 1557 GACGATGATGACACTGATGATGAAAGTGTTGTCCCGGCTTCTGGAGAGTTGAAATCTGAT 1616
|||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 1585 GACGATGATGACACAGATGATGAAAGTGTCGTCCCGACTTCTGGAGAGTTGAAATCTGAT 1644
Query 1617 GCGGATAGTATAAACACTGATGTGAATGATCCCAATGATGACTATTATTACTTTGAGAAA 1676
|| |||||||| ||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1645 GCTGATAGTATTAACACTGATGTGAATGATCCCAATGATGATTACTATTACTTTGAGAAA 1704
Query 1677 GAGGTTGAAGGTACCGTCTTAAGGGCTGTTGAAGAGAATATCAAAGTGGACCTTGTAACT 1736
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1705 GAGGTTGAAGGGACCGTCTTAAGGGCTGTTGAAGAGAATATCAAAGTGGACCTTGTAACT 1764
Query 1737 CTGGAGATTAACGGGCTCCGGTTGTCATACAACATGGAATCTGCAGATTGTGCTGGAGCA 1796
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 1765 ATGGAGATTAACGGGCTGCGGTTGTCATTCAACATGGAATCTGCAGATTGTGCTGGAGCA 1824
Query 1797 ACATTCTACTCGATGATTAAACTGGCAGTTGATACTCCACACAACTCTGCTAGTGAGTTG 1856
||||| | ||||||||| ||||||||| |||||||||||||||| |||| ||||||||||
Sbjct 1825 ACATTTTTCTCGATGATAAAACTGGCACTTGATACTCCACACAATTCTGGTAGTGAGTTG 1884
Query 1857 TATAAAAACGCGGCGAGTATCATTACAAATTGGAAGGAACTTCTTGGATTCTATGTAAAG 1916
||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| | ||||
Sbjct 1885 TATAAAAACGCAGCGAGTATCATTACAAAATGGAAGGATCTTCTTGGCTTCTACGCAAAG 1944
Query 1917 AAAATTGATGAACAGATAGAAGTGATTATGAAATTTGAAGAGATGTGTCAGGAATCTCCC 1976
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 1945 AAAATTGATGAACAGATAGAAGTGATCATGAAATTTGAAGAGATGTGTCAGGAATCTCAC 2004
Query 1977 AAAGAGTTGGGCCCTTTGTTTACACAGATTCTGCATCTTCTATATGACAAAGACGTCTTG 2036
|||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| |||
Sbjct 2005 AAAGAGTTGGGCCCTTTGTTCACACAAATTCTACATCTTCTATATGACAAGGACGTGTTG 2064
Query 2037 CAAGAAGATGCAG-T-CTTAAGATGGGCTGAAGAGAAAGCAGGCGCAGATGAAGCTGACA 2094
||||||||||| | | | | ||||||| |||||||| |||||||| |||||||||||||
Sbjct 2065 CAAGAAGATGC-GATAC-TGAGATGGGAGGAAGAGAAGGCAGGCGCGGATGAAGCTGACA 2122
Query 2095 AAGTATATCTGAAACAATGTGATACATTCATACAGTGGCTCAAAGAAGCATCTGAGGAGg 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2123 AAGTATATCTGAAACAATGTGATACATTCATACAGTGGCTCAAAGAAGCATCTGAGGAGG 2182
Query 2155 aagatgaagatgatgaagatgaagaagatga---------CTGAATTGGTAAACCTGAGT 2205
|||||||||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct 2183 AAGATGAAGATGATGAAGATGAAGAAGAAGAAGAAGATAACTGAATTGGTATACCTGAGT 2242
Query 2206 TCGATGGCTCTCAA-T-G--G--C------C--T------C---ACATTTTGATTGATCA 2242
|||||||||||||| | | | | | | | ||||||||||||||||
Sbjct 2243 TCGATGGCTCTCAACTAGTTGTTCATTATGCAGTTGATGGCCTCACATTTTGATTGATCA 2302
Query 2243 TTTACTTTTAAGAGTGATACTCTGTTTTT-G--CTG-CATCGTCAATAATTTCttttttt 2298
|||||||||||||| |||||||||||| | ||| |||| |||||||| ||||||||
Sbjct 2303 TTTACTTTTAAGAGC--TACTCTGTTTTTTGTTCTGTCATCATCAATAAT--CTTTTTTT 2358
Query 2299 tttttt-t-ttCCGATGTCTTCTGTTGCTTGATGAGATATTTTCTCATCCA 2347
|| | | ||| ||| | ||||||||| |||||||| |||||||||||
Sbjct 2359 CTTCATGTCTTC---TGT-T-CTGTTGCTTCATGAGATACTTTCTCATCCA 2404
> AT4G18300.1 | Symbols: | Trimeric LpxA-like enzyme | chr4:10118852-10120981
FORWARD LENGTH=2130
Length=2130
Score = 2063 bits (1117), Expect = 0.0
Identities = 1849/2190 (84%), Gaps = 99/2190 (5%)
Strand=Plus/Plus
Query 9 ATGGGTGCTCAGAAGAAAGGCGGCGGC-GCTAGGGTTTCG-GAGGATGCGGTGGAAC-AG 65
|||||||||||||||||| | ||||| |||| || |||| |||||| | | ||| | |
Sbjct 1 ATGGGTGCTCAGAAGAAA-CCCGCGGCGGCTAAGG-TTCGTGAGGATTCAGAGGATCTA- 57
Query 66 AGTCGTCAACGATTGCAAGCAATTCTTCTTGCCGATAGCTTCGCCACAAAATTTCGTCCC 125
|||||||||||||| ||||| |||||||| ||||| |||||| |||| |||| ||| ||
Sbjct 58 AGTCGTCAACGATTACAAGCCATTCTTCTAGCCGACAGCTTCACCACTCAATTCCGTTCC 117
Query 126 GTAACCCTAGAACGCCCAAAGGTACTATTGCCGATAGTTAATGTTCCGATGATTGATTAT 185
||||||||||||| ||||||||||||||||||||||| || | ||||||||||||||
Sbjct 118 ATAACCCTAGAACGACCAAAGGTACTATTGCCGATAGTGAACATCCCGATGATTGATTAC 177
Query 186 ACATTGGCATGGCTCGAATCTGCTGGAATAGAGGAGGTTTTCGTCTTCTGTTGTGCTCAT 245
|| || |||||||||||||| ||||| || || |||||||| || |||||||||||||||
Sbjct 178 ACTTTAGCATGGCTCGAATCAGCTGGGATCGAAGAGGTTTTTGTGTTCTGTTGTGCTCAT 237
Query 246 TCGAT-GCAGGTTATCGAATATCTGGAGAAGTCCGAGTGGT--ACTCG--C--ACCCAAA 298
||| | |||| | ||||| || ||| |||| || || |||| || || | |||||||
Sbjct 238 TCG-TCGCAGATCATCGATTACCTGAAGAAATCGGAATGGTACACACGCCCAAACCCAAA 296
Query 299 CTTGCTT-GTGAGAACAATCGAGTCGCATAAATCCATCAGTGCTGGAGATGCTTTGCGTT 357
|||| || |||||||| || | ||| || || |||| ||||| |||||||||| ||||||
Sbjct 297 CTTG-TTGGTGAGAACGATAGTGTCTCACAATTCCACCAGTGTTGGAGATGCTCTGCGTT 355
Query 358 ACATGTATGAGCAACAGACAGAGACGTCTCAGATTCAAGGTGATTTTGTTCTTGTTAGTG 417
| || ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 356 ATATCTATGAACAACAGACAGAGACGTCGCAGATTCAAGGTGATTTTGTTCTTGTTAGTG 415
Query 418 GAGATACTGTGAGTAATATGCCACTAGCTGATTTGATTAAAGAACATAGAGAGAGGAAGA 477
| |||||||| |||||||||||||| |||||||||||| || |||||||||| |||||||
Sbjct 416 GTGATACTGTTAGTAATATGCCACTTGCTGATTTGATTCAACAACATAGAGATAGGAAGA 475
Query 478 AGAAAGATGAGAAAGCTATCATGACTATGGTTATTAAGCAGTCTAAATCTTCTCCACTCA 537
|||||||||||||||||||||||||||||||| ||||| || | | | || |
Sbjct 476 AGAAAGATGAGAAAGCTATCATGACTATGGTTTTTAAGAAG-C---A----GT---CT-A 523
Query 538 CGCATCAGTCAAGATTAGGAACGGATCAGCTCTTCATTGCTGTAGATCCTTTGAC-AAAG 596
| | | | | || ||||| | ||||| ||||| |||| ||||||||||| || |||
Sbjct 524 -G-A-C--T-AGGAATAGGATCTGATCAACTCTTTGTTGCAGTAGATCCTTTAACGAAA- 576
Query 597 CAGCTTCTTCATTACGAGGAA-GATAAGATT-GATCATCCAAGTGGGTCAGTTTGTTTAG 654
||||||||||||||||||||| | | | ||| || | | | ||| | |||| ||||
Sbjct 577 CAGCTTCTTCATTACGAGGAATG-T-A-ATTCGA-GAGGC--G-GGGAC-TTTTGCTTAG 628
Query 655 AGAAGTCATTGTTGGATACTAATCCTTCTGTTTTAGTATGCAATGATATGCAGGATTGCT 714
| ||||| |||||||||| | | ||| ||| |||||| ||||||||||||||| |
Sbjct 629 ATAAGTCCTTGTTGGATAGT-A-----CTG-TTT--TATGCAGTGATATGCAGGATTGTT 679
Query 715 ACATTGACATATGTTCTCCTGAGGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAAC 774
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 680 ACATTGACATTTGTTCTCCTGAGGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAGC 739
Query 775 ATCTGCGTCGTCATTTTGTCAAAGGTGTGCTTGTTGATGATATCATGGGTTATAAAATTT 834
|| |||| ||||||||||| || ||| |||||||||||||||| |||||||| || ||||
Sbjct 740 ATATGCGCCGTCATTTTGTTAATGGTTTGCTTGTTGATGATATTATGGGTTACAAGATTT 799
Query 835 TCACTCATGAGATTCACTCCA---GCTATGCTGGTAGGATTGATAATTTCCGCAGCTATG 891
|||||||||||||||| || | | ||||||| ||||| || ||||| || |||||||
Sbjct 800 TCACTCATGAGATTCAGTCGAGTTGTTATGCTGCAAGGATCGACAATTTACGGAGCTATG 859
Query 892 ACACTGTTAGCAAGGATATAATTCAGAGGTGGACATATCCTTATGTACC-AGATATAAAT 950
|||||||||||||||||||||| |||||||||||||| || || ||||| | |||| ||
Sbjct 860 ACACTGTTAGCAAGGATATAATCCAGAGGTGGACATACCCGTACGTACCTA-ATATCGAT 918
Query 951 TTCAGCGGAAATCGGCCTCTTAAGCTCGGGAGACAAGGGATATACCGGGCTTCTGATGTA 1010
|||||||| ||||| ||| | ||||||||||||| |||||||||||||||||||||| |
Sbjct 919 TTCAGCGGGAATCGCCCTGTAAAGCTCGGGAGACGGGGGATATACCGGGCTTCTGATGCA 978
Query 1011 GTTCAATCACGA-TCTGCTGATGTTGGAGCTTCTACCGTCATTGGATACGGCACGAAAAT 1069
|||||||||| | |||| |||||||||||||| || ||||||||||| ||||| |||||
Sbjct 979 GTTCAATCAC-ACACTGCAGATGTTGGAGCTTCCACTGTCATTGGATATGGCACCAAAAT 1037
Query 1070 TGGTAATGG-GGATAAAATCTCGAACTCGGTTATTGGGAATGGATGTTCTATTGGATCAA 1128
||||||||| || |||||||| ||||| ||||||||||| ||||||| |||||||||||
Sbjct 1038 TGGTAATGGAGG-TAAAATCTATAACTCTGTTATTGGGAACGGATGTTGTATTGGATCAA 1096
Query 1129 ATGTCGTGATAGAAGGCTCATACATATGGAATAATGTTACGATTGAAGATGGGTGTGAGA 1188
|||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1097 ATGTGGTGATACAAGGCTCATACATATGGAACAATGTTACGATTGAAGATGGGTGTGAGA 1156
Query 1189 TAAGGAACGCTATTGTCTGTGATGGAGTGAAAATCAGAGCAGGAGCTGTTCTGCAGCCTG 1248
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 1157 TAAGGAACGCTATTGTCTGTGATGGTGTGAAAGTCAGAGCAGGAGCTGTTCTGCAGCCTG 1216
Query 1249 GTGTTGTTTTGTCTTTCAATGTTGTAGTTGGGCGGGACTTTGTTGTGCCTGCATACTCAA 1308
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1217 GTGTTGTTTTGTCTTTCAGTGTTGTAGTTGGGCGGGACTTTGTTGTACCTGCATATTCAA 1276
Query 1309 AGGTTTCCCTACTTCAACAGCCAACAACAGAAGATAGCGATGAAGAGCTGGAATATGCTG 1368
|||| || |||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1277 AGGTCTCTTTACTTCAACAGCCAACTACAGAAGACAGCGATGAAGAGCTGGAATATGCTG 1336
Query 1369 ATAGTAGCAGCGGGACTGCAGATCATTTGGCAGGCCTAAAT--TT-GCAAATGGAGTCCA 1425
||||||||||||||||||||||||||| | ||||||||||| || |||||| |||||||
Sbjct 1337 ATAGTAGCAGCGGGACTGCAGATCATTCGTCAGGCCTAAATAATTTGCAAATTGAGTCCA 1396
Query 1426 AAGCATCTGAGCTTGGTCCTGATGGAGCAGGTTACATATGGGAAGCATGTGA-AGGGGCT 1484
||||||||||||||||||||||||||||||||||||| |||||| |||||| || | ||
Sbjct 1397 AAGCATCTGAGCTTGGTCCTGATGGAGCAGGTTACATCTGGGAAATATGTGACAGCG-CT 1455
Query 1485 CATGATGAGGAGTGGAAGCATTCTGTTGCACCAATCCCGAAGGATAAACTTTCTGAGATT 1544
||||||||||||||||| |||||||||| ||||||||| | |||||||||| | || ||
Sbjct 1456 CATGATGAGGAGTGGAAACATTCTGTTGTACCAATCCCCATGGATAAACTTGCCGATATC 1515
Query 1545 ACCCAGGCCATAGACGATGATGACACT-GATGATGAAAGTGTTGTCCCGGCTTCTGGAGA 1603
|| |||||| ||||||||||||| | || ||||| | ||||||||| ||||||||||
Sbjct 1516 ACTGGGGCCATGGACGATGATGACA-TAGAGGATGACATTGTTGTCCCACCTTCTGGAGA 1574
Query 1604 GTTGAAATCTGATGCGGATAGTATAAACACTGATGTGAATGATCCCAATGATGACTATTA 1663
||||||||||||| | |||| ||| |||||||||| |||||| || ||| | | |
Sbjct 1575 GTTGAAATCTGATACTGATATTATTAACACTGATGCAAATGATTCCTATG--G-CGA--- 1628
Query 1664 TTACTTTGAGAAAGAGGTTGAAGGTACCGT-CTTAAGGGCTGTTGAAGAGAATATCAAAG 1722
|||||||| ||||||||||| | | |||||| || |||||| || ||| |||||
Sbjct 1629 ---CTTTGAGAGAGAGGTTGAAGA-AGAATTCTTAAGTGCCGTTGAAAAGGATAACAAAG 1684
Query 1723 TGGACCTTGTAACTC-TGGAGATTAACGGGCTCCGGTTGTCATACAACATGGAATCTGCA 1781
|||| |||||| || | ||||||| | ||||||| | ||||||||||| ||||||
Sbjct 1685 CGGACATTGTAATTCCTTT-GATTAACTCACACCGGTTGGCGTACAACATGGACTCTGCA 1743
Query 1782 GATTGTGCTGGAGCAACATTCTACTCGATGATTAAACTGGCAGTTGATACTCCACACAAC 1841
||||||||||||||| ||||||||| ||||| | ||||||||| | | |||||| ||
Sbjct 1744 GATTGTGCTGGAGCAGTATTCTACTCTATGATGAGACTGGCAGTAAAGAGTCCACATAAT 1803
Query 1842 TCTGCTAGTGAGTTGTATAAAAACGCGGCGAGTATCATTAC-AAATTGGAAGGAACTTCT 1900
||||||| ||| ||||| | ||||||| | || |||| || |||| |||||| | ||||
Sbjct 1804 TCTGCTACTGAATTGTACAGAAACGCGATGGGTGTCATAACTAAAT-GGAAGGGAGTTCT 1862
Query 1901 TGGATTCTATGTAAAGAAAATTGATGAACAGATAGAAGTGATTATGAAATTTGAAGAGAT 1960
||| |||||| ||||| ||| ||||| ||||||||||||||| |||||||| ||||||||
Sbjct 1863 TGGGTTCTATTTAAAGCAAACTGATGCACAGATAGAAGTGATAATGAAATTCGAAGAGAT 1922
Query 1961 GTGTCAGGAATCTCCCAAAGAGTTGGGCCCTTTGTTTAC-ACAGATTCTGCATCTTCTAT 2019
||||||||||||| || |||||| ||||||||||| | | | |||||| | |||| |
Sbjct 1923 GTGTCAGGAATCTG--AA-GAGTTGAGCCCTTTGTTTGCTAAAC-TTCTGCCTTTTCTGT 1978
Query 2020 ATGACAAAGACGTCTTGCAAGAAGATGC-AGTCTTAAGATGGGCTGAAGAGAAAGCAGGC 2078
||||||||||||| ||||||||||||| | |||| ||||||| ||||||||||||||
Sbjct 1979 ATGACAAAGACGTGGTGCAAGAAGATGCGA-TCTTGAGATGGGGGGAAGAGAAAGCAGGA 2037
Query 2079 GCAGATGAA-GCTGACAAAGTATATCTGAA-ACAATGTGA-TACATTCATACAGTGGCTC 2135
||||| || | ||||||||| |||||||| | ||||||| | |||||||| ||||||||
Sbjct 2038 GCAGACGATTG-TGACAAAGTTTATCTGAATA-AATGTGAGT-CATTCATAAAGTGGCTC 2094
Query 2136 AAAGAAGCATCTGAGGAGgaagatgaagat 2165
|| |||||||||||||||||||| ||||||
Sbjct 2095 AAGGAAGCATCTGAGGAGGAAGAAGAAGAT 2124
> AT3G02270.1 | Symbols: | Trimeric LpxA-like enzyme | chr3:448977-451007
REVERSE LENGTH=2031
Length=2031
Score = 669 bits (362), Expect = 0.0
Identities = 596/707 (84%), Gaps = 24/707 (3%)
Strand=Plus/Plus
Query 660 TCATTGTTGGATAC-TAATCCTTCTGTTTTAG-TATGCAATGATATGCAGGATTGCTACA 717
|||||| ||||| | |||||| |||||||| | |||| | ||||||||||||||| ||||
Sbjct 601 TCATTGCTGGAT-CGTAATCCATCTGTTTT-GTTATGTAGTGATATGCAGGATTGTTACA 658
Query 718 TTGACATATGTTCTCCTGAGGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAACATC 777
||||||||||||||| ||||||||||||||| |||| ||||||||| ||||| ||||||
Sbjct 659 TTGACATATGTTCTCTTGAGGTGCTTAGTCTATTTGTGGATAACTTCGATTACCAACATA 718
Query 778 TGCGTCGTCATTTTGTCAAAGGTGTGCTTGTTGATGATATCATGGGTTATAAAATTTTCA 837
||||| || ||||||| ||||||| |||| |||||| || || ||||| || |||||||
Sbjct 719 TGCGTTGTGATTTTGTGGAAGGTGTTCTTGCTGATGACATTATCGGTTACAAGATTTTCA 778
Query 838 CTCATGAGATTCA-CTCCAGCTATGCTGGTAGGATTGATAATTTCCGCAGCTATGACACT 896
||||||||||| | ||| | |||||| ||||||||| |||||| | |||||||||| |
Sbjct 779 CTCATGAGATT-AGCTCGTGTTATGCTTCTAGGATTGAAAATTTCAGGAGCTATGACA-T 836
Query 897 -GTTAGCAAGGATATAATTCAGAGGTGGACATAT-CCTTATGTACCAGATATAAATTTCA 954
|| |||||||||||||| |||||| |||||| | || |||||||| ||||| || ||||
Sbjct 837 GGTGAGCAAGGATATAATCCAGAGGCGGACAT-TCCCGTATGTACCGGATATGAAGTTCA 895
Query 955 GCGGAAATCGGC-CTCTTAAGCTCGGGAGACAAGGGATATACCGGGCTTCTGATG-TAGT 1012
||||||||| || |||||||||||| |||||||||||| ||| ||||||||||| ||
Sbjct 896 GCGGAAATC-GCACTCTTAAGCTCGAGAGACAAGGGATCTACAAGGCTTCTGATGCTA-C 953
Query 1013 TCAATCACGATCTGCTGATGTTGGAGCTT-CTACCGTCATTGGATACGGCACGAAA-ATT 1070
||| | || ||||||| |||||||||||| ||| ||||||||| | | ||| ||| |||
Sbjct 954 TCAGTTACCATCTGCTCATGTTGGAGCTTCCTA-TGTCATTGGACATGCCAC-AAATATT 1011
Query 1071 GGTAATGGGGA-TAAAATCTCGAACTCGGTTATTGGGAATGGATGTTCTATTGGATCAAA 1129
|| | | |||| ||| |||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 1012 GGGAGT-GGGACTAAGATCTTGAACTCTGTTATTGGGAATGGATGTTCTATTGGATCAAA 1070
Query 1130 TGTCGTGATAGAAGGCTCATACATATGGAATAATGTTACGATTGAAGATGGGTGTGAGAT 1189
||| ||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||
Sbjct 1071 TGTGGTGATCCAAGGCTCATACATATGGAACAATGTTACGGTTGAAGATGGATGTGAGAT 1130
Query 1190 AAGGAACGCTATTGTCTGTGATGGAG-TGAAAATCAGAGCAGGAGCTGTTCTGCAGCCTG 1248
|||||| |||||||| ||||||| || ||||| | | ||||||||| || || | ||||
Sbjct 1131 AAGGAATGCTATTGTATGTGATG-AGGTGAAAGTGTGTGCAGGAGCTATTGTGAAACCTG 1189
Query 1249 GTGTTGTTTTGTCTTTCAATGTTGTAGTTGGGCGGGACTTTGTTGTGCCTGCATACTCAA 1308
||||||| |||||||| || |||||||| ||| ||||||||||||| |||||||| |||
Sbjct 1190 GTGTTGTGTTGTCTTTTAAGGTTGTAGTCGGGAGGGACTTTGTTGTACCTGCATATTCAC 1249
Query 1309 AGGTTTCCCTACTTCAACAGCCAACA-ACAGAAGATAGCGATGAAGA 1354
||||||| ||||| | ||| |||| | |||||| || ||||||||
Sbjct 1250 AGGTTTCACTACTCCGACAACCAATGGA-AGAAGACAGTGATGAAGA 1295
Score = 318 bits (172), Expect = 1e-85
Identities = 373/466 (80%), Gaps = 29/466 (6%)
Strand=Plus/Plus
Query 59 GGAACAGAGT---CGTCAACGATTGCAAGCAATTCTTCTTGCCGATAGCTTCGCCACAAA 115
|||||||||| |||||||| || ||||| |||||||| || || || |||||||| ||
Sbjct 51 GGAACAGAGTCGCCGTCAACGGTTACAAGCCATTCTTCTCGCTGACAGTTTCGCCACGAA 110
Query 116 ATTTCGTCCCGTAACCCTAGAACGCCCAAAGGTAC-TATTGCCGATAGTTAATGTTCCGA 174
| | | |||| ||||| |||||||||| || || | | || ||| |||| ||| |||| |
Sbjct 111 ACTCCTTCCCTTAACCTTAGAACGCCCCAATGT-CTTGTTACCGCTAGTGAATATTCCCA 169
Query 175 TGATTGATTATACATTGGCATGGCTCGAATCTGCTGGAATAGAGGAGGTTTTCGTCTTCT 234
|||||||||| || || || ||||||||||||||||| ||||| || ||||||| |||
Sbjct 170 TGATTGATTACACCTTAGCTTGGCTCGAATCTGCTGGCATAGAAGAAGTTTTCG---TCT 226
Query 235 GTTGTGCTCATTCGATGCAGGTTATCGAATATCTGGAGAAGTCCGAGTGGTACTCGCACC 294
|| || | |||||||| || ||||| |||||| | || || || ||||||||||| |
Sbjct 227 -TT-TG--C--TCGATGCAAGTCATCGATTATCTGAACAACTCTGACTGGTACTCGCA-C 279
Query 295 CAA-AC-TTGCTTGTGAGAACAATCGAGT---CGCATAAA-TCCATCAGTGCTGGAGATG 348
|| || || | || | ||| || |||| |||| ||| |||| ||||||||| ||||
Sbjct 280 AAAGACTTTAC-GGTAAAAACTATAGAGTCACCGCA-AAACTCCACCAGTGCTGGTGATG 337
Query 349 CTTTGCGTTACATGTATGAGCAACAGACAGAGACGTCTCAGATTCAAGGTGATTTTGTTC 408
|||||||||| || || ||||| |||| ||||||||||||||||||||||| |||||||
Sbjct 338 CTTTGCGTTATATCTACGAGCAGCAGATTGAGACGTCTCAGATTCAAGGTGACTTTGTTC 397
Query 409 TTGTTAGTGGA-GATACTGTGAGTAATATGCCACTAG-CTG-ATTTGATTAAAGAACATA 465
|||||| |||| | || ||| ||||| ||||| || | | | | ||||| ||||||| |
Sbjct 398 TTGTTAATGGATG-TATTGTTAGTAACATGCCCCT-GAC-GCAGCTGATTCAAGAACACA 454
Query 466 GAGAGAGGAAGAAGAAAGATGAGAAAGCTATCATGACTATGGTTAT 511
|||| || || |||||||||||||||||||||||||||||||||||
Sbjct 455 GAGATAGAAAAAAGAAAGATGAGAAAGCTATCATGACTATGGTTAT 500
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116515464945
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5