BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482472
Length=2642
Score E
Sequences producing significant alignments: (Bits) Value
AT2G35060.2 | Symbols: KUP11 | K+ uptake permease 11 | chr2:147... 4257 0.0
AT1G31120.1 | Symbols: KUP10 | K+ uptake permease 10 | chr1:111... 2348 0.0
> AT2G35060.2 | Symbols: KUP11 | K+ uptake permease 11 | chr2:14775063-14778870
REVERSE LENGTH=2642
Length=2642
Score = 4257 bits (2305), Expect = 0.0
Identities = 2538/2650 (96%), Gaps = 18/2650 (1%)
Strand=Plus/Plus
Query 1 TCAGTTGCAGAGAAAGAGAAGACAAAACGCAGCTCTCTC-TGCGTTTTCTTCCTTTTTCT 59
|||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||
Sbjct 3 TCAGCTGCAGAGAAAGAGAAGTCAAAACGCAGCTCTCTCTTGCGTTTTCTTCCTTTCTCC 62
Query 60 TTTCTCAATTCCCCAGAGAA-ACCATAACTCTGTAAAAAGGAAACTCTTTTTTGTTCTGA 118
|||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||
Sbjct 63 TTTCTCAATTCCCCAGAGAACAACATAACTCTGTAAAAGGGAAACTCTATTTTGTTCTGA 122
Query 119 ATCGAAAGAAGTTTTAAATGGCTGCAAGAGTAGAAGCAGCAACGATGGGTGGTGAGATTG 178
||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 123 ATCAAAAGTAGTTTTAAATGGCGGCAAGAGTAGAAGCAGCAACGATGGGTGGTGAGATTG 182
Query 179 ATGAAGAAGAGACTGATGAGAGAGGTAGCATGTGGGATTTGGACCAGAAGCTTGATCAAT 238
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 ATGAAGAAGAGAGTGATGAGAGAGGTAGCATGTGGGATTTGGACCAGAAGCTTGATCAAT 242
Query 239 CCATGGATGAAGAAGCTGGTCGACTTAGAAACATGTACAGAGAAAAGAAATTCTCGGCTC 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 CCATGGATGAAGAAGCTGGTCGACTTAGAAACATGTACAGAGAAAAGAAATTCTCGGCTC 302
Query 299 TTCTGCTTCTGCAGCTTTCGTTTCAGAGCCTTGGTGTTGTATATGGAGATTTAGGGACAT 358
|||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||
Sbjct 303 TTCTACTTCTGCAGCTTTCATTTCAGAGTCTTGGTGTTGTTTATGGTGATTTAGGGACAT 362
Query 359 CTCCTCTCTATGTTTTCTACAATACATTTCCTCATGGGATCAAAGATCAAGAAGATATCA 418
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 363 CTCCTCTATATGTTTTCTACAATACATTTCCTCATGGGATCAAAGATCCAGAAGATATCA 422
Query 419 TTGGAGCTCTATCTCTCATTATATATTCACTCACACTCATCCCTCTCCTCAAATATGTTT 478
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 423 TTGGAGCTCTATCTCTCATTATTTATTCACTCACACTCATCCCTCTCCTCAAATACGTTT 482
Query 479 TCGTTGTATGTAAAGCAAACGATAATGGTCAAGGTAGTGGGACTTTTGCTCTGTATTCAT 538
||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||
Sbjct 483 TCGTTGTATGTAAAGCAAATGATAATGGTCAAGGTAGTGGGACGTTTGCTTTGTATTCAT 542
Query 539 TACTCTGTAGACATGCCAAAGTGAAAACAATTCAGAACCAACACCGTACTGATGAAGAGC 598
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 543 TACTCTGTAGACATGCCAAAGTCAAAACAATTCAGAACCAACACCGTACTGATGAAGAGC 602
Query 599 TTACTACTTACAGCCGCACTACGTTCCATGAGCATTCCTTTGCTGCTAAGACCAAAAGAT 658
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 603 TTACTACTTACAGCCGCACTACGTTCCATGAGCATTCCTTTGCTGCTAAGACTAAAAGAT 662
Query 659 GGTTAGAAAAGCGGACATCTAGAAAAACCGCGCTTCTTATTTTAGTTCTTGTTGGTACAT 718
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 663 GGTTAGAAAAGCGGACATCTAGAAAAACGGCGCTTCTTATTTTAGTTCTTGTTGGTACGT 722
Query 719 GTATGGTTATCGGCGATGGTATCCTTACTCCCGCCATTTCTGTTCTCTCAGCTGCTGGTG 778
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 723 GTATGGTCATCGGCGATGGTATCCTTACTCCCGCTATTTCTGTTCTCTCAGCTGCTGGTG 782
Query 779 GGCTAAGAGTAAACCGTCCTCACATAAGCAATGGTGTTGTTGTTTTGGTCGCTGTTGTGA 838
||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||
Sbjct 783 GGCTAAGAGTAAACCTTCCTCACATAAGCAATGGTGTTGTTGTTTTTGTTGCTGTTGTGA 842
Query 839 TATTAGTCAGCTTGTTTAGTGTACAGCATTATGGAACAGACCGGGTTGGTTGGCTTTTTG 898
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 843 TATTAGTCAGCTTGTTTAGCGTACAGCATTATGGAACAGACCGGGTTGGTTGGCTTTTTG 902
Query 899 CGCCCATTGTTTTTCTCTGGTTTCTCTCTATCGCAAGTATCGGTATCTACAATATCTGGA 958
||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 903 CGCCCATTGTTTTCCTCTGGTTTCTCTCTATCGCAAGTATTGGTATGTACAATATCTGGA 962
Query 959 AACACGACACTAGTGTCTTGAAAGCTTTCTCCCCAGTTTATATATATCGGTATTTTAAAA 1018
|||| || ||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct 963 AACATGATACTAGTGTCTTGAAAGCTTTCTCTCCGGTTTATATATATCGGTATTTTAAGA 1022
Query 1019 GAGGAGGTCGGGATCGTTGGACCTCTCTTGGAGGTATTATGCTTAGTATAACAGGAATTG 1078
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1023 GAGGAGGTCGGGATCGTTGGACCTCTCTTGGAGGCATTATGCTTAGTATAACAGGAATCG 1082
Query 1079 AAGCACTCTTCGCTGATCTATCGCATTTTCCGGTCTCAGCTGTGCAAATCGCGTTTACTG 1138
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1083 AAGCACTCTTCGCTGATCTATCGCATTTTCCGGTCTCAGCTGTGCAAATCGCTTTTACGG 1142
Query 1139 TAATCGTGTTTCCTTGCCTTCTTTTGGCTTATAGCGGACAAGCTGCTTACATTAGGATAT 1198
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |
Sbjct 1143 TAATCGTGTTTCCTTGCCTTCTTTTGGCTTATAGTGGACAAGCTGCGTACATTAGGAGGT 1202
Query 1199 ATCCGGATCATGTGGCTGATGCGTTTTACCGTTCCATTCCAGGAAGTGTATATTGGCCAA 1258
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1203 ATCCGGATCATGTAGCTGATGCGTTTTACCGTTCCATTCCAGGAAGTGTGTATTGGCCAA 1262
Query 1259 TGTTCATTATTGCAACCGCTGCAGCGATTGTGGCGAGCCAAGCTACGATCTCGGCGACAT 1318
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1263 TGTTCATTATTGCAACCGCTGCAGCGATTGTGGCGAGCCAAGCTACTATCTCGGCAACAT 1322
Query 1319 TCTCCTTAGTCAAGCAAGCTCTAGCCCACGGTTGCTTTCCAAGAGTTAAAGTGGTGCATA 1378
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1323 TCTCCTTAGTCAAGCAAGCTCTAGCCCATGGTTGCTTTCCAAGAGTTAAAGTGGTGCATA 1382
Query 1379 CTTCCCGGAAATTCCTCGGTCAGATTTACGTTCCTGACATAAATTGGATTCTAATGATCC 1438
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1383 CTTCCCGGAAATTCCTCGGTCAGATTTACGTTCCTGACATAAATTGGATCCTAATGATCC 1442
Query 1439 TTTGCATTGCTGTCACCGCTGGATTCAAGAACCAGAGTCAGATAGGAAACGCTTATGGGA 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 TTTGCATTGCTGTCACCGCTGGATTCAAGAACCAGAGTCAGATAGGAAACGCTTATGGGA 1502
Query 1499 CCGCAGTTGTGATCGTCATGCTTGTGACAACACTGCTTATGATGCTGATCATGATCCTAG 1558
| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 1503 CTGCAGTTGTGATCGTCATGCTCGTGACAACACTGCTTATGACGCTGATCATGATCCTAG 1562
Query 1559 TGTGGCGTTGCCATTGGGTTCTTGTTCTCATATTCACCATCCTCTCACTTGTCGTGGAAT 1618
|||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| |
Sbjct 1563 TGTGGCGTTGCCATTGGGTTCTGGTTCTCATATTCACCGTGCTCTCACTTGTCGTGGAGT 1622
Query 1619 GCACCTATTTCTCGGCCATGCTTTTCAAAATCGACCAAGGTGGTTGGGTACCGCTAGTAA 1678
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1623 GCACTTATTTCTCGGCCATGCTTTTCAAAATCGACCAAGGTGGTTGGGTACCGCTCGTGA 1682
Query 1679 TCGCTGCAGCTTTTCTCCTCATCATGTCGGTATGGCACTACGGAACTTTAAAGAGATACG 1738
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 1683 TCGCTGCAGCTTTTCTCCTCATCATGTGGGTATGGCACTACGGAACTTTAAAGAGATATG 1742
Query 1739 AGTTTGAGATGCACAGTAGAGTCTCAATGGCTTGGATCCTCGGACTCGGTCCTAGCCTTG 1798
||||||| |||||| |||||||||||||||||||||||||||| || |||||||||||||
Sbjct 1743 AGTTTGAAATGCACTGTAGAGTCTCAATGGCTTGGATCCTCGGTCTGGGTCCTAGCCTTG 1802
Query 1799 GGCTTGTTCGGGTTCCCGGGGTTGGCCTCGTTTACACCGAACTAGCCAGTGGAGTCCCTC 1858
|||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1803 GGCTTGTTCGGGTTCCGGGGGTTGGCCTCGTTTACACTGAACTAGCTAGTGGAGTCCCTC 1862
Query 1859 ACATTTTTTCTCATTTCATCACAAACCTACCAGCCATTCACTCAGTTGTGGTGTTCGTAT 1918
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1863 ATATTTTTTCTCATTTCATCACAAACCTACCGGCCATTCACTCAGTTGTGGTGTTCGTAT 1922
Query 1919 GCGTCAAGAACCTCCCGGTTTACACCGTACCCGAGGAAGAGCGGTTCCTCGTTAAAAGGA 1978
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1923 GCGTCAAGAACCTCCCAGTTTACACCGTACCCGAGGAAGAGCGGTTCCTCGTTAAAAGGA 1982
Query 1979 TTGGTCCAAAAAACTTCCACATGTTCCGTTGTGTCGCAAGGTACGGATACAGAGACTTGC 2038
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1983 TTGGTCCAAAAAATTTCCACATGTTCCGTTGCGTCGCAAGGTACGGATACAGAGACTTGC 2042
Query 2039 ACAAGAAAGATGATGACTTTGAGAAACGTCTCTTTGAGAGCCTCTTCTTGTATGTCCGCC 2098
|||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||
Sbjct 2043 ACAAGAAAGATGATGACTTTGAAAAACGCCTCTTTGAGAGCCTCTTCTTGTACGTACGCC 2102
Query 2099 TTGAATTGATGATGGAAGGAGGCTGTTCGGATTCCGATGACTACAGCATCTGCGGAAGCC 2158
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2103 TTGAATCGATGATGGAAGGAGGCTGTTCGGATTCCGATGACTACAGCATCTGCGGAAGCC 2162
Query 2159 AGCAACAGCTTAAAGACACACTTGGGAACGGGAATGAGAACGAGAATCTGGCAACGTTTG 2218
||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||
Sbjct 2163 AGCAACAGCTTAAAGACACGCTCGGGAATGGGAATGAGAACGAGAATCTGGCAACGTTTG 2222
Query 2219 ATACATTTGACTCGATAGAGTCAATAACCCCAGTGAAACGGGTGAGCAACACGGTGACAG 2278
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2223 ATACATTTGACTCGATAGAGTCAATAACCCCAGTGAAACGGGTGAGCAACACAGTGACAG 2282
Query 2279 CGTCGAGCCAGATGAGCGGTGGACTAGACGAGCTGGAGTTCATAAACGGGTGCAGGGACG 2338
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2283 CGTCGAGCCAGATGA---GTGGAGTAGACGAGCTGGAGTTCATAAACGGGTGCAGGGACG 2339
Query 2339 CAGGAGTGGTACACATAATGGGGAACACGGTGGTTCGAGCCAGGAGGGAAGCGAGGTTCT 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 CAGGAGTGGTACACATAATGGGGAACACGGTGGTTCGAGCCAGGAGGGAAGCGAGGTTCT 2399
Query 2399 ACAAGAAGATAGCGATTGACTATGTGTATGCATTTCTTAGGAAGATTTGCAGAGAACATA 2458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2400 ACAAGAAGATAGCGATTGACTATGTGTATGCATTTCTTAGGAAGATTTGCAGAGAACATA 2459
Query 2459 GTGCTATCTACAATGTTCCTCAGGAGAGCCTTTTGAATGTTGGTCAGATTTTCTATGTAT 2518
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2460 GTGTTATCTACAATGTTCCTCAAGAGAGCCTTTTGAATGTTGGTCAGATTTTCTATGTAT 2519
Query 2519 AAAAATATATATGTATATGCATGTGTTCGTTTATATTCCGTTTGTATGTAATGTCT--GA 2576
|| ||||| ||||||| ||||||| ||| |||||| ||||||||||||||||| ||
Sbjct 2520 AA---TATAT--GTATATGTATGTGTT-GTT-ATATTCTGTTTGTATGTAATGTCTATGA 2572
Query 2577 TGTTGTATAGTTATATCAAAATTTTGGGTTTGCCAAGTTATTAAACAA----TGGAAGGA 2632
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 2573 TGTTGTATAGTTATATCAAAATTTTGGGTTTGCCAAGTTATTAAACAAACAATGGAATGA 2632
Query 2633 CTATTTTATC 2642
||||||||||
Sbjct 2633 CTATTTTATC 2642
> AT1G31120.1 | Symbols: KUP10 | K+ uptake permease 10 | chr1:11104301-11107763
REVERSE LENGTH=2867
Length=2867
Score = 2348 bits (1271), Expect = 0.0
Identities = 2052/2425 (85%), Gaps = 70/2425 (3%)
Strand=Plus/Plus
Query 134 AAATGGCTGCAAGAGTAGAAGCA-GCAACGATGGGTGGTGAGATTGATGAAGAAGAGACT 192
||||||| | ||||||||| || || | | |||||||||||||||||||||| | |
Sbjct 401 AAATGGCGGGGAGAGTAGAATCATCCATTGGT-GGTGGTGAGATTGATGAAGAAG-G--T 456
Query 193 GATGAGAGAGGTAGCATGTGGGATTTGGACCAG-AAGCTTGATCAATCC-ATGGATGAAG 250
|||||||||||||| |||||||||||||| ||| | ||||||||| || ||||||||||
Sbjct 457 GATGAGAGAGGTAGTATGTGGGATTTGGATCAGTCA-CTTGATCAA-CCTATGGATGAAG 514
Query 251 AAGCTGGTCGACTTAGAAACATGTACAGAGAAAAGAAATTCTCGGC-TCTTCTGCTTCTG 309
|||||||||| || || |||||||| |||||||||||||||||||| | || ||||||||
Sbjct 515 AAGCTGGTCGCCTCAGGAACATGTATAGAGAAAAGAAATTCTCGGCGT-TTTTGCTTCTG 573
Query 310 CAGCTTTCGTTTCAGAGCCTTGGTGTTGTATATGGAGATTTAGGG-ACATCTCCTCTCTA 368
|||||||| |||||||| ||||||||||| ||||||||||| ||| || |||||||| ||
Sbjct 574 CAGCTTTCATTTCAGAGTCTTGGTGTTGTTTATGGAGATTT-GGGAACTTCTCCTCTATA 632
Query 369 TGTTTTCTACAATACATTTCCTC-ATGGGATCAAAGATCAAGAAGATATCATTGGAGCTC 427
||||||||| ||||||||||||| | ||||||||||| | ||||||||||||||||||
Sbjct 633 TGTTTTCTATAATACATTTCCTCGA-GGGATCAAAGACCCTGAAGATATCATTGGAGCTT 691
Query 428 TATCTCTCATTATATATTCACTCACACTCATCCCTCTCCTCAAATATGTTTTCGTTGTAT 487
|||| || || |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 692 TATCGCTAATCATATATTCCCTCACACTCATCCCTCTCCTCAAATATGTGTTCGTTGTAT 751
Query 488 GTAAAGCAAACGATAATGGTCAAGGTAGTGGGACTTTTGCTCTGTATTCATTACTCTGTA 547
| ||||||||||||||||| ||| | |||| || |||||||| ||||| || |||||||
Sbjct 752 GCAAAGCAAACGATAATGGGCAA-G--GTGGTACATTTGCTCTCTATTCTTTGCTCTGTA 808
Query 548 GACATGCCAAAGTGAAAACAATTCAGAACCAACACCGTACTGATGAAGAGCTTACTACTT 607
||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 809 GACATGCAAAAGTTAGCACAATTCCGAACCAACACCGTACTGATGAAGAGCTTACTACTT 868
Query 608 ACAGCCGCACTACGTTCCATGAGCATTCCTTTGCTGCTAAGACCAAAAGATGGTTAGAAA 667
| || || ||||| || ||||||| ||| |||||||| || ||||| ||||||||||| |
Sbjct 869 ATAGTCGTACTACATTTCATGAGCGTTCTTTTGCTGCAAAAACCAAGAGATGGTTAGAGA 928
Query 668 AGCGG-ACATCTAG-AAAAACCGCGCTTCTTATTTTAGTTCTTGTTGGTACATGTATGGT 725
| ||| || ||||| ||||| ||||| |||||| | |||||||||||||| || |||||
Sbjct 929 A-CGGTACCTCTAGGAAAAAT-GCGCTACTTATTCTCGTTCTTGTTGGTACGTGCATGGT 986
Query 726 TATCGGCGATGGTATCCTTACTCCCGCCATTTCTGTTCTCTCAGCTGCTGGTGGGCTAAG 785
|| |||||||| |||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct 987 GATAGGCGATGGAATCCTTACTCCCGCCATTTCGGTTCTATCTGCTGCGGGTGGGCTCAG 1046
Query 786 AGTAAACCGT-CCTCACATAAGCAATGGTGTTGTTGTT-TTGGTCGCTGTTGTGATATTA 843
||||||| | ||||| |||| ||| ||| |||||||| ||| | |||||||||||||||
Sbjct 1047 GGTAAACC-TACCTCATATAAACAACGGTATTGTTGTTGTTG-TGGCTGTTGTGATATTA 1104
Query 844 GTCAGCTTGTTTAGTGTACAGCATTATGGAACAGACCGGGTTGGTTGGCTTTTTGCGCCC 903
|| ||||||||||||||||| ||||||||||||||| | || || |||||||| ||||||
Sbjct 1105 GTGAGCTTGTTTAGTGTACAACATTATGGAACAGACAGAGTCGGGTGGCTTTTCGCGCCC 1164
Query 904 ATTGTTTTTCTCTGGTTTCTCTCTATCGCAAGTATCGGTATCTACAATATCTGGAAACAC 963
||||| |||||||||||||||| ||| |||||||||||||| | |||||| ||||||||
Sbjct 1165 ATTGTATTTCTCTGGTTTCTCTTTATTGCAAGTATCGGTATGTTCAATATATGGAAACAT 1224
Query 964 GACACTAGTGTCTTGAAAGC-TTTCTCCCCAGTTTATATATATCGGTATTTTAAAAGAGG 1022
||| | || || |||||||| ||| ||||| |||||||||| ||| ||||||||||||||
Sbjct 1225 GACCCAAGCGTTTTGAAAGCGTTT-TCCCCGGTTTATATATTTCGATATTTTAAAAGAGG 1283
Query 1023 AGGTCGGGATCGTTGGACCTCTCTTGGAGGTATTATGCTTAGTATAACAGGAATTGAAGC 1082
||| | |||||||||||||| |||||||| |||||||||||||| ||||| ||||||||
Sbjct 1284 AGGCCAAGATCGTTGGACCTCGCTTGGAGGCATTATGCTTAGTATCACAGGGATTGAAGC 1343
Query 1083 ACTCTTCGCTGATCTATCGCATTTTCCGGTCTCAGCTGTGCAAATCGCGTTTACTGTAAT 1142
||||| || ||||| || |||||||| ||||||||||||||| |||| |||||||||||
Sbjct 1344 TCTCTTTGCGGATCTCTCTCATTTTCCAGTCTCAGCTGTGCAATTCGCTTTTACTGTAAT 1403
Query 1143 CGTGTTTCCTTGCCTTCTTTTGGCTTATAGCGGACAAGCTGCTTACATTAGGATA-TATC 1201
|||||||||||||| |||||||||||||| ||||||||||| ||| |||| | | || |
Sbjct 1404 TGTGTTTCCTTGCCTCCTTTTGGCTTATAGTGGACAAGCTGCATACCTTAGAA-AGTACC 1462
Query 1202 CGGATCATGTGGCTGATGCGTTTTACCGTTCCATTCCAGGAAGTGTATATTGGCCAATGT 1261
|| ||||||| | || |||||||| | ||||||||| ||| ||||||||||||||||
Sbjct 1463 CGCATCATGTCGAAGACGCGTTTTATCAATCCATTCCAAAAAGAGTATATTGGCCAATGT 1522
Query 1262 TCATTATTGCAACCGCTGCAGCGATTGTGGCGAGCCAAGCTACGATCTCGGCGACATTCT 1321
|||| |||||||| ||||| || || || || ||||||||||| || || || |||||||
Sbjct 1523 TCATAATTGCAACTGCTGCTGCAATAGTTGCAAGCCAAGCTACAATATCCGCAACATTCT 1582
Query 1322 CCTT-AGTCAAGCAAGCTCTAGCCCACGGTTGCTTTCCA-AGAGTTAAAGTGGTGCATAC 1379
| || | ||||||||||||| || || || || ||||| ||||||||||| ||||||||
Sbjct 1583 CGTTGA-TCAAGCAAGCTCTTGCTCATGGATG-TTTCCCGAGAGTTAAAGTCGTGCATAC 1640
Query 1380 TTCCCGGAAATTCCTCGGTCAGATTTACGTTCCTGACATAAATTGGATTCTAATGATCCT 1439
||||||||||||||| ||||||||||||||||| ||||| |||||||| || ||||||||
Sbjct 1641 TTCCCGGAAATTCCTTGGTCAGATTTACGTTCCAGACATCAATTGGATCCTCATGATCCT 1700
Query 1440 TTGCATTGCTGTCACCGCTGGATTCAAGAACCAGAGTCAGATAGGAAACGCTTATGGGAC 1499
|||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1701 TTGCATAGCTGTCACTGCTGGATTCAAGAACCAGAACCAGATAGGAAATGCTTATGGGAC 1760
Query 1500 CGCAGTTGTGATCGTCATGCTTGTGACAACACTGCTTATGATGCTGATCATGATCCTAGT 1559
||||||||||| |||||||| |||||||| || || ||||||||||||||||| || ||
Sbjct 1761 TGCAGTTGTGATTGTCATGCTCGTGACAACGCTTCTCATGATGCTGATCATGATACTTGT 1820
Query 1560 GTGGCGTTGCCATTGGGTTCTTGTTCTCATATTCAC-CATCCTCTCACTTGTCGTGGAAT 1618
||||| |||||||||||||| || ||| |||| || | || | || ||||| |||||||
Sbjct 1821 TTGGCGATGCCATTGGGTTCTAGTCCTCTTATTTACTCTTC-TATCCCTTGTTGTGGAAT 1879
Query 1619 GCACCTATTTCTCGGCCATGCTTTTCAAAATCGACCAAGGTGGTTGGGTACCGCTAGTAA 1678
|||| || |||||||| |||| ||||| | |||||||||| ||||| ||||| || |
Sbjct 1880 GCACTTACTTCTCGGCGGTGCTCTTCAAGGTTAACCAAGGTGGATGGGTTCCGCTGGTCA 1939
Query 1679 TCGCTGCAGCTTTTCTCCTCATCATGTCGGTATGGCACTACGGAACTTTAAAGAGATACG 1738
| || || || ||||| ||||||||| || ||||| || ||||| | ||||| || |
Sbjct 1940 TTGCGGCTGCGTTTCTTGTCATCATGTATGTTTGGCATTATGGAACCCTCAAGAGGTATG 1999
Query 1739 AGTTTGAGATGCACAGTAGAGTCTCAATGGCTTGGATCCTCGGACTCGGTCCTAGCCTTG 1798
||||||| ||||| |||| |||||| ||||||||||| ||||||||||||||||||||||
Sbjct 2000 AGTTTGAAATGCATAGTAAAGTCTCCATGGCTTGGATTCTCGGACTCGGTCCTAGCCTTG 2059
Query 1799 GGCTTGTTCGGGTTCCCGGGGTTGGCCTCGTTTACACCGAACTAGCCAGTGGAGTCCCTC 1858
| ||||| || ||||| ||| ||||||| ||||||||||| ||||| |||||||||||||
Sbjct 2060 GTCTTGTCCGTGTTCCTGGGATTGGCCTTGTTTACACCGAGCTAGCTAGTGGAGTCCCTC 2119
Query 1859 ACATTTTTTCTCATTTCATCACAAACCTACCAGCCATTCACTCAGTTGTGGTGTTCGTAT 1918
||||||| |||||||||||||||||||| || || | |||||| || ||| | || || |
Sbjct 2120 ACATTTTCTCTCATTTCATCACAAACCTGCCGGCAACTCACTCTGTCGTGATCTTTGTCT 2179
Query 1919 GCGTCAAGAACCT-CCCGGTTTACACCGTACCCGAGGAAGAGCGGTTCCTCGTTAAAAGG 1977
||||||||||||| |||| | |||||||| ||| ||||||| |||||||| || |||||
Sbjct 2180 GCGTCAAGAACCTTCCCG-TATACACCGTTCCCCAGGAAGAACGGTTCCTTGTAAAAAGA 2238
Query 1978 ATTGGTCCAAAAAACTTCCACATGTTCCGTTGTGTCGCAAGGTACGGATACAGAGACTTG 2037
|| || || |||||||| ||||||||||| || || || |||||||||||||||||||||
Sbjct 2239 ATCGGACCCAAAAACTTTCACATGTTCCGCTGCGTTGCGAGGTACGGATACAGAGACTTG 2298
Query 2038 CACAAGAAAGATGATGACTTTGAGAAACGTCTCTTTGAGAGCCTCTTC-TTGTATGTCCG 2096
|||||||||||||| |||||||||||||| |||||||| ||||||||| || | ||||
Sbjct 2299 CACAAGAAAGATGACGACTTTGAGAAACGGCTCTTTGAAAGCCTCTTCCTTTTCC-TCCG 2357
Query 2097 CCTTGAATTGATGATGGAAGGAGGCTGTTCGGATTCCGATGACTACAGCATCTGCGGAAG 2156
||| |||| |||||||||||| ||| || |||||||| || |||||| ||||||||||
Sbjct 2358 CCTCGAATCGATGATGGAAGG---CTGCTCAGATTCCGAAGATTACAGCGTCTGCGGAAG 2414
Query 2157 CCAGCAACAGCTTAAAGAC-ACACTTGGG---AACGGGAATGAGAACGAGAAT-----C- 2206
||| |||| | | || | | | |||| |||||||||| |||||||| | |
Sbjct 2415 CCAACAAC-G---ACAGTCCAGAGATGGGGTCAACGGGAATGGGAACGAGATTAGGAACG 2470
Query 2207 TGGCAACGTTTGATACATTTGACTCGATAGAGTCAAT-A-A-C-CCCAGTG-AA-A---C 2257
|| | ||||||||||||||||| || |||||||| | | | | |||| | || | |
Sbjct 2471 TGTCGACGTTTGATACATTTGATTCTATAGAGTCGGTTATAGCTCCCACTACAACAAAAC 2530
Query 2258 GGGTGAG-CAACACGGTGACAGCGTCGAGCCAGATGAGCGGTGGACTAGACGA-GCTGGA 2315
|| || || ||| ||||| | ||||||||| |||||||| ||| ||||| | ||||
Sbjct 2531 GGACAAGTCA-CACAGTGACGGGGTCGAGCCAAATGAGCGGAGGAGGGGACGAAG-TGGA 2588
Query 2316 GTTCATAAACGGGTGCAGGGACGCAGGAGTGGTACACATAATGGGGAACACGGTGGTTCG 2375
|||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct 2589 GTTCATAAACGGGTGCAGAGACGCAGGAGTGGTGCATATAATGGGGAACACAGTGGTTCG 2648
Query 2376 AGCCAGGAGGGAAGCGAGGTTCTACAAGAAGATAGCGATTGACTATGTGTATGCATTTCT 2435
||||||||| || || ||||||||||||| |||||| ||||| ||||| ||||| |||||
Sbjct 2649 AGCCAGGAGAGAGGCAAGGTTCTACAAGAGGATAGCCATTGATTATGTTTATGCGTTTCT 2708
Query 2436 TAGGAAGATTTGCAGAGAACATAGTGCTATCTACAATGTTCCTCAGGAGAGCCTTTTGAA 2495
|||||||||||| |||||| | ||||| |||| |||||||||||||||||||||||| ||
Sbjct 2709 TAGGAAGATTTGTAGAGAAAACAGTGCCATCTTCAATGTTCCTCAGGAGAGCCTTTTAAA 2768
Query 2496 TGTTGGTCAGATTTTCTATGTATAA 2520
|||||| |||||||||||||| |||
Sbjct 2769 TGTTGGCCAGATTTTCTATGTGTAA 2793
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131186555945
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5