BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482483
Length=1798
Score E
Sequences producing significant alignments: (Bits) Value
AT2G35170.1 | Symbols: | Histone H3 K4-specific methyltransfer... 2689 0.0
AT4G17080.1 | Symbols: | Histone H3 K4-specific methyltransfer... 976 0.0
> AT2G35170.1 | Symbols: | Histone H3 K4-specific methyltransferase
SET7/9 family protein | chr2:14827463-14829802 FORWARD
LENGTH=1804
Length=1804
Score = 2689 bits (1456), Expect = 0.0
Identities = 1698/1811 (94%), Gaps = 32/1811 (2%)
Strand=Plus/Plus
Query 1 TTCTTCTTCTTCTTCGCGAAAACTT-GAAAGCAGTTTTAGGAACAAAAACCAGAGGCTTT 59
||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||
Sbjct 4 TTCTTCTTCTTCTTCGCGAAAACTTGGAAA-CTGTTTTAGGAACAAAAACCAGAGGCTTT 62
Query 60 GATTTGaaaaaaaaCCCTAATTTTCAAGAACCCTAAATTCACC-ACCATTTCTTCTCAAA 118
|||||| ||||||||||||||||||| ||||||||| || || ||||||||| | ||||
Sbjct 63 GATTTG-GAAAAAACCCTAATTTTCAACAACCCTAAA-TCCCCTACCATTTCTCCCCAAA 120
Query 119 TCCTCTTTCCAAGTTCCATCCTTTTTATGTAAATGCATCTGAAGAAATCATCTGTAACAG 178
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 121 TCCTCTTTCCAAGTTCCATACTCTTTATGTAAATGCATCTGAAGAAATCATCTGTAACAG 180
Query 179 AACGACGATTAATCGGGAAAGACGATTCCGATCCAAACCATATCCCCGATCCGATTCACc 238
|||||||||||||||||||||||||||||||||||||||| |||||| |||||| |
Sbjct 181 AACGACGATTAATCGGGAAAGACGATTCCGATCCAAACCAAATCCCCAATCCGA-T---- 235
Query 239 atcatcatcatcatcaGAACCC-GAATAAAACTCGAACCGCCATTG---ATAAAGGCTCT 294
|||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||
Sbjct 236 -TCATCATCATCATCAG-ACCCAGAATAAAAATCGAACCGCCATTGATAATAAAGGCTCT 293
Query 295 GGCTTCACTGTGTACAATCACCCCCAAGGTCAGAGTCATCATCACACGGTTGATATCCCA 354
||||||||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 294 GGCTTCACTAAGTATAATCATCCCCAAGGTCAGAATCATCATCACACGGTTGATATCCCA 353
Query 355 ACCGGAGTTGATCATTTCCGACGAAGAAACGCACGGGCACGATTGGGATCGATATCTTCA 414
||||| ||||| |||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct 354 ACCGGTGTTGACCATTTCCGACGAAGAAGCGCACGGGCACGATCAGGATCGATTTCTTCA 413
Query 415 TATTTCCCATCAAATCTTTTGTCTTTTCTTTCTTCGTATCGTCCCGTGATTGCTCGGTTC 474
| ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct 414 TTTTTCCCATCAAATCTTTTGTCTTCTCTTTCTTCCTATCGTCCTGTGATTGCTCGGTTC 473
Query 475 TTGAGGAAGCTTCTACGCTATACCCTTCGAGCCCGTTTGATTTGTTTCCATCTTCGTTTC 534
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 474 TTGAGGAAGCTTCTACGCTATACCCTTAGAGCCCGTTTGATTTGTTTCCATCTTCGTTTC 533
Query 535 TTGCTTCTTCTTGCTGTCCCTCCTTTATACATCTTCTTCCTTGTGATCAATCTTCGTATC 594
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 534 TTGCTTCTTCTCGCTGTCCCTCCTTTATACATCTTCTTCCTTGTTATCAATCTTCGTATC 593
Query 595 TTTCTTCGTCTAATCTTTGCGATTATCGCTCTGTCTTTCATCCTCTCGATCTCTCTCAAA 654
|| ||||||||| |||||| |||||||||| | || |||||||||||||||||||||| |
Sbjct 594 TTCCTTCGTCTAGTCTTTGTGATTATCGCTTTATCCTTCATCCTCTCGATCTCTCTCAGA 653
Query 655 TTCGCTCTTCCTCACTTACCGTCAATTCGTCTTTTTGTCGCACGCTTGCTGACCTTTATC 714
|||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct 654 TTCGCTCTTCCTCACTTAACATCAATTCGTCTTTTTGTCGCACGCTTGCTGACATTTATC 713
Query 715 CCTGCCAGATTCTCTTCCTCTCAGCCGAGCACTACTAACCAAG-TGATTTGGTCCATTGG 773
||||||||||||||||||||||||||||| | ||| ||| || || |||||||||||||
Sbjct 714 CCTGCCAGATTCTCTTCCTCTCAGCCGAG--C-ACTGACCGAGTTG-TTTGGTCCATTGG 769
Query 774 GTCGAAGCCAGTTGCGGAG---AATAAGACCAATTCAGGATCTTGGGTTCAGAAGTTTGG 830
||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||
Sbjct 770 GTCGAAGCCAGTTGCGGAGAATAATAAGACAAATTCAGGATCTTGGGTTCAGAAGTATGG 829
Query 831 CACTAATGATGTGTATGAAGGAGAGTTTCATAGAGGAAAGTGTTCAGGAAGTGGAGTTTA 890
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 830 CACTAATGATATGTATGAAGGAGAGTTTCATAGAGGAAAGTGTTCAGGAAGTGGAGTTTA 889
Query 891 TTACTATTCCATGAAAGGCAAATACGAAGGAGAGTGGATTGATGGGAAATATGATGGTTA 950
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 TTACTATTCTATGAAAGGCAAATACGAAGGAGAGTGGATTGATGGGAAATATGATGGTTA 949
Query 951 TGGAGTAGAAACATGGGCTAAAGGAAGTAGGTATCGAGGTCAATATAGGTTAGGGCTAAG 1010
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 950 TGGAGTAGAAACATGGTCTAAAGGGAGTAGGTATCGAGGTCAATATAGGTTAGGTCTAAG 1009
Query 1011 ACATGGAATTGGAGTCTATACATTTTATACAGGAGATGTGTATGCTGGTGAGTGGTCTAA 1070
||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1010 ACATGGAATTGGAGTTTATACGTTTTATACAGGAGATGTGTATGCTGGTGAATGGTCTAA 1069
Query 1071 TGGCCAGTGCCATGGTTGTGGTGTATATACCTCTGAGGATGGAAGTAGATACGATGGAGA 1130
||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1070 TGGGCAGTGCCATGGTTGTGGTGTATATACCTCTGAGGATGGAAGTAGATATGACGGAGA 1129
Query 1131 GTTCAAGTGGGGTGTCAAACATGGCCTTGGTAGTTACCATTTCAGAAATGGCGATGCATA 1190
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1130 GTTCAAGTGGGGTGTCAAACATGGCCTTGGTAGTTACCATTTCAGAAATGGTGATGCGTA 1189
Query 1191 TGCTGGGGAGTATTTTGCTGACAAGATGCATGGTTTTGGAGTGTATCACTTTGCGAACGG 1250
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1190 TGCTGGGGAGTATTTTGCAGACAAGATGCATGGTTTTGGAGTGTATCACTTTGCGAACGG 1249
Query 1251 CCATAAGTATGAAGGAGCTTGGCACGAGGGAAGAAGGCAAGGGCTCGGTATGTACACTTT 1310
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1250 GCATAAGTATGAAGGAGCTTGGCACGAGGGAAGAAGGCAAGGGCTTGGTATGTATACTTT 1309
Query 1311 CAGGAATGGTGAGACTCAAGCCGGACATTGGGAAGACGGTATACTCAGTTGTGCTACCGA 1370
|||||||||||| || |||||||| ||||||||||||||| ||||||||||| |||||||
Sbjct 1310 CAGGAATGGTGATACACAAGCCGGTCATTGGGAAGACGGTGTACTCAGTTGTCCTACCGA 1369
Query 1371 GCAGACTATCCGTCCCGGATCATCTTTTACCATCAGCCATTCCAAAGTTGTTGATGCTGT 1430
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1370 GCAGACTATCCGTCCTGGATCATCTTTTACCATAAGCCATTCCAAAGTTGTTGATGCTGT 1429
Query 1431 TGAGCAAGCAAGGAAAGCAGCTGAGAAAGCGCATGAAGTTGTGAAAGTGGAAGAGAGGAT 1490
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1430 TGAGCAAGCAAGGAAAGCAGCTGAGAAAGCACATGAAGTTGTGAAAGTGGAAGAGAGGAT 1489
Query 1491 CAAGAGAGCGGTGATGGCTGCAAATAGAGCAGCGAATGCGGCTAGAGTAGCAGCTGTGAA 1550
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1490 CAAGAGAGCGGTGATGGCTGCAAATAGAGCAGCGAATGCAGCTAGAGTAGCAGCCGTGAA 1549
Query 1551 GGCTGTCCAATCCCAAACCTTTCACAGGAATGATGGTGATCTTGAAACCAAATGTTGAGC 1610
||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1550 GGCTGTCCAATCCCAGACCTTTCACAGGAATGATGGCGATCTTGAAACCAATTGTTGAGC 1609
Query 1611 ATAGGTTAGAAGAGATCTTCATTAACAGGTTTTCTTGTTCCTCCTTTATGAGCAAAGCTA 1670
|||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||
Sbjct 1610 ATAGGTTAGAAGAGATCTTCCTTAACAGGTTTTCTTGTTCCT--TT-ATGAGCAAAGCTA 1666
Query 1671 GTTTTAAACTGTAGATAATAAACTAGGAGA-GATCTTTGTAAATCAACACa-aaaaaaaT 1728
|||| ||||||||||||||||||||| ||| |||||||||| ||||||| | ||||||||
Sbjct 1667 GTTTGAAACTGTAGATAATAAACTAG-AGATGATCTTTGTATATCAACA-AGAAAAAAAT 1724
Query 1729 -GGGTCTGCTTCATAGAAGGCAATTGACATACGTGTAGCCAAAAATCCATATCTTGATTA 1787
||||||||||||||||| |||| |||||||| ||||||||||||||| |||||||||||
Sbjct 1725 TGGGTCTGCTTCATAGAATGCAACTGACATACATGTAGCCAAAAATCCCTATCTTGATTA 1784
Query 1788 AAGAATTAGAA 1798
|| ||||||||
Sbjct 1785 AACAATTAGAA 1795
> AT4G17080.1 | Symbols: | Histone H3 K4-specific methyltransferase
SET7/9 family protein | chr4:9601451-9604207 FORWARD LENGTH=2053
Length=2053
Score = 976 bits (528), Expect = 0.0
Identities = 932/1122 (83%), Gaps = 48/1122 (4%)
Strand=Plus/Plus
Query 480 GAAGCTTCTACGCT-ATACCCTTCGAGCCCGTTTGATTTGTTTCCATCTTCGTTTCTTGC 538
||||||||| || | || ||| ||| ||||||||| |||||||||||||||||||| |
Sbjct 533 GAAGCTTCTCCG-TCATGTTCTTAGAGTCCGTTTGATATGTTTCCATCTTCGTTTCTTAC 591
Query 539 TTCTTCT-TGCTGTCCCTCCTTTATACATCTTCTTCCTTG-TGATCAATCTTC-GTA-TC 594
||||||| | |||| |||||| | ||||||||||| |||| |||| | | ||| | | ||
Sbjct 592 TTCTTCTCT-CTGTTCCTCCTCTCTACATCTTCTT-CTTGTTGATTAGT-TTCAG-ATTC 647
Query 595 TTTCTTCGTC-TAATCTT-TGCGATTATCGCTCTGTCTTTCATCCTCTCGATCTCTCTCA 652
|| |||| || | |||| | ||||||||||| | |||||| |||| |||||||||||||
Sbjct 648 TTCCTTC-TCTTTGTCTTCT-CGATTATCGCTTTTTCTTTCGTCCTTTCGATCTCTCTCA 705
Query 653 AATTCGCTCTTCCTCACTTACCGTCAATTCGTCTT-TTTGTCGCACGCTTGCTGAC-CT- 709
|||||||||||||||||||||| || |||||| || || |||| || || || | ||
Sbjct 706 AATTCGCTCTTCCTCACTTACCATCGATTCGT-TTGATTATCGCTCGGTTACTTTCTCTC 764
Query 710 ----TTATCCCTGCCAGAT--T-CTCTTCCTCTCAGCCGAGCACTACTAACCAAGTGATT 762
||| |||| |||||| | |||||| |||||| ||| || ||||| || || |||
Sbjct 765 AAGCTTACCCCTACCAGATCATCCTCTTCATCTCAG--GAGAAC-ACTAAACATGTTATT 821
Query 763 TGGTCCATTGGGTCGAAGCCAGTTG-CGGAGAATAAGACCAATTCAGGATCTTGGGTTCA 821
||||| |||||||| ||||| | || | ||||| |||||||| || || || ||||||||
Sbjct 822 TGGTCAATTGGGTCTAAGCCTG-TGACTGAGAAGAAGACCAACTCTGGCTCATGGGTTCA 880
Query 822 GAAGTTTGGCACTAATGATGTGTATGAAGGAGAGTTTCATAGAGGAAAGTGTTCAGGAAG 881
||||| || || |||||| || || |||||||||||||| || ||||||||||||||
Sbjct 881 GAAGTACAGCTCTGGTGATGTATACGAGGGAGAGTTTCATAGGGGGAAGTGTTCAGGAAG 940
Query 882 TGGAGTTTATTACTATTCCATGAAAGGCAAATACGAAGGAGAGTGGATTGATGGGAAATA 941
|||||||||||||||||| ||||| || ||||||||||| || |||||||||||||| ||
Sbjct 941 TGGAGTTTATTACTATTCTATGAAGGGTAAATACGAAGGGGATTGGATTGATGGGAAGTA 1000
Query 942 TGATGGTTATGGAGTAGAAACATGGGCTAAAGGAAGTAGGTATCGAGGTCAATATAGGTT 1001
|||||| |||||||| ||||| ||||||||||| |||||||| ||||||||||| |||
Sbjct 1001 TGATGGATATGGAGTTGAAACTTGGGCTAAAGGGAGTAGGTACCGAGGTCAATACAGGCA 1060
Query 1002 AGGGCTAAGACATGGAATTGG-AGTCTATACATTTTATACAGGAGATGTGTATGCTGGTG 1060
|||| | |||||||||| ||| | |||| | |||||||||||| ||||| ||||||||||
Sbjct 1061 AGGGATGAGACATGGAACTGGTA-TCTACAGATTTTATACAGGGGATGTATATGCTGGTG 1119
Query 1061 AGTGGTCTAATGGCCAGTGCCATGGTTGTGGTGTATATACCTCTGAGGATGGAAGTAGAT 1120
||||||||||||| ||| ||||||| |||||||| ||||||||||||||||| ||| | |
Sbjct 1120 AGTGGTCTAATGGACAGAGCCATGGCTGTGGTGTGTATACCTCTGAGGATGGTAGTCGTT 1179
Query 1121 ACGATGGAGAGTTCAAGTGGGGTGTCAAACATGGCCTTGGT-AGTTACCATTTCAGAAAT 1179
| ||||||||| || |||||||||||||||||||||||| | ||| ||||||||||||
Sbjct 1180 TTGTTGGAGAGTTTAAATGGGGTGTCAAACATGGCCTTGGTCA-TTATCATTTCAGAAAT 1238
Query 1180 GGCGATGCATATGCTGGGGAGTATTTTGCTGACAAGATGCATGGTTTTGGAGTGTATCAC 1239
|| ||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 1239 GGTGATACATATGCTGGGGAGTATTTTGCAGACAGGATGCATGGTTTTGGAGTGTATCAA 1298
Query 1240 TTTGCGAA-CGGCCATAAGTATGAAGGAGCTTGGCACGAGGGAAGAAGGCAAGGGCTCGG 1298
|||| ||| ||| ||| |||||||||||| ||||| ||||| ||||||||||| || ||
Sbjct 1299 TTTG-GAAACGGGCATCGGTATGAAGGAGCCTGGCATGAGGGGAGAAGGCAAGGACTTGG 1357
Query 1299 TATGTACACTTTCAGGAATGGTGAGACTCAAGCCGGACATTGGGAAGACGGTA-TACTCA 1357
||||||||| ||||||||||||||||| || || || |||||||||||||| | | || |
Sbjct 1358 TATGTACACGTTCAGGAATGGTGAGACACAGGCAGGCCATTGGGAAGACGG-AGTTCTTA 1416
Query 1358 GTTGTGCTACCGAGCAGACTA-TCCGTCCCGGAT-CATC-TTTTACCATCAGCCATTCCA 1414
||| ||||||||||||| | || | ||| ||| |||| |||| ||||||| |||||||
Sbjct 1417 ACTGTCCTACCGAGCAGACCACTC-G-CCCTGATTCATCGTTTT-CCATCAGTCATTCCA 1473
Query 1415 AAGTTGTTGATGCTGTTGAGCAAGCAAGGAAAGCAGCTGAGAAAGCGCATGAAGTTGTGA 1474
| ||||| || |||| ||||||||||||||||||| ||||||| | ||||||||||
Sbjct 1474 AGGTTGTCGACACTGTCCAGCAAGCAAGGAAAGCAGCCAAGAAAGCACGCGAAGTTGTGA 1533
Query 1475 AAGTGGAAGAGAG-GATCAAGAGAGCGGTGATGG-CTGCAAATAGAGCAGCGAATGCGGC 1532
|||| |||||||| | | || ||||| ||||||| | ||||| ||||||| ||||| ||
Sbjct 1534 AAGTTGAAGAGAGAG-TGAACAGAGCAGTGATGGTC-GCAAACCGAGCAGCAAATGCTGC 1591
Query 1533 TAGAGTAGCAGCTGTGAAGGCTGTCCAATCCCAAACCTTTCA 1574
|||||| || ||| |||||||||||| ||||||| |||||
Sbjct 1592 TAGAGTTGCTGCTACAAAGGCTGTCCAAACCCAAACATTTCA 1633
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88955365740
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5