BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482513 Length=1737 Score E Sequences producing significant alignments: (Bits) Value AT2G35540.1 | Symbols: | DNAJ heat shock N-terminal domain-con... 2050 0.0 > AT2G35540.1 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:14927158-14928930 FORWARD LENGTH=1773 Length=1773 Score = 2050 bits (1110), Expect = 0.0 Identities = 1282/1365 (94%), Gaps = 11/1365 (1%) Strand=Plus/Plus Query 374 AGGGAGAAATGGTAAGTGGTGGTTGTGGTGATGATGAAACGTCGACGTTTTCGACGGTTT 433 |||| |||||||| || ||||||| ||||| |||||||||||| ||||||||| |||||| Sbjct 419 AGGGGGAAATGGTTAGCGGTGGTTCTGGTGGTGATGAAACGTCAACGTTTTCGGCGGTTT 478 Query 434 GCTCGGGTTGTAGGTCGGTGCATAAGTTTGATAGGAAGAATTTAGGACAAAATTTGATGT 493 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 479 GTTCGGGTTGTAGGTCGGTGCATAAGTTTGATAGGAAGTATTTAGGACAAAATTTGATGT 538 Query 494 GCTCTAGTTGCAAGAAGATTTTTGAGGCAAAGGAAGTTGAGAAGGAAGAAGAGGGTAGAG 553 || ||| ||||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct 539 GCCCTACTTGCAAGAATAGTTTTGAGGCGAAGGAAGTTGAGAAGGAAGAAGAGGGT---- 594 Query 554 ATGGAAGTGAAAATGGAGCTTGTACTTCCAAGATTATAACATATAGTAGGAGGAAGAGGC 613 | | | |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 595 A--G-A--GAAAATGGAGCTTGTACTTCCAAGATCATAACATATAGTAGGAGGAAGAGGC 649 Query 614 CTCTTGGTAGCGATGGTGAGAGTCTTAGAAGAGAAGTTGAGACAGGGGAGATGAGTGAGG 673 || ||| |||||||||||| ||||| | || ||||||||||||||||||||||||| ||| Sbjct 650 CTGTTGATAGCGATGGTGAAAGTCTGATAAAAGAAGTTGAGACAGGGGAGATGAGTCAGG 709 Query 674 GAGGAGCAGAAGCTATTAATGTATCTGAGAGGTTGGATGAAGAAGATGAAGGGATGATGA 733 || |||||||||||||||||||| |||| ||| ||||||||| |||||||||||||||| Sbjct 710 AAGCAGCAGAAGCTATTAATGTATTTGAGGGGTCGGATGAAGAGGATGAAGGGATGATGA 769 Query 734 CTTTGGCAGAAATGCAATCGGTGATAAAGAGAAACAAATCGAAGGTGAAGTCGAAGATCA 793 ||||||||||||||||| |||||||||||||||| || ||||||||||| |||||||||| Sbjct 770 CTTTGGCAGAAATGCAAGCGGTGATAAAGAGAAATAAGTCGAAGGTGAATTCGAAGATCA 829 Query 794 CTGAGAAAAATAGCATTGGAGAAGAAAACATGGGAAGGGAAACGCAGAAGAGATCTTCAG 853 |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 830 CTGAGAAAGATAGCAGTGGAGAAGAAAACATGGGAAGGGAAACGCAGAAGAGATCTTTAG 889 Query 854 CTGATGTCTCCATGACTGAAACGTTAAGGGAGATGAGTACTAAC-AAGGTGAATAATAAA 912 |||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 890 CTGATGCCTCCATGACTGAAACGTTAAGGGAGATGAGTACTAACGCA-GTGAATAATAAA 948 Query 913 CGGGAAGCTTTAAAGAATAATAAGAATATAAAGAAGAAGAAGATGACGAACCACAAGAAT 972 | |||| ||||||||||| |||||||||||||||||||||||| ||||||||||| || Sbjct 949 CAAGAAGTTTTAAAGAATAGGAAGAATATAAAGAAGAAGAAGATGGCGAACCACAAGGAT 1008 Query 973 TTAACTGAGATTGTGGATTTAGAATACGTGCCACGGGTTGATAGGAAGAGGGATCGTGGT 1032 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1009 TTAACTGAGATAGTGGATTTAGAATACGTGCCTCGGGTTGATAGGAAGAGGGATCGTGGT 1068 Query 1033 AAGTTGAGCCAAGAAATCTATATGGAAGACGAGGATTTTGAACTGTATGATTTTGATAAG 1092 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1069 AAGTTAAGCCAAGAAATGTATATGGAAGACGAGGATTTTGAACTGTATGATTTTGATAAG 1128 Query 1093 GACAGGATGCCGAGGAGCTTCAAGAAAGGGCAGATTTGGGCGATCTATGATGGTGGTGAT 1152 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1129 GACCGGATGCCGAGGAGCTTCAAGAAAGGGCAGATTTGGGCGATATATGATGGTGGTGAT 1188 Query 1153 GACAAAATGCCTCGGAGTTACTGCTTGGTTAGTGAAGTAGTCTCTTTGAACCCTTTTAAG 1212 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct 1189 GACAAAATGCCTCGGAGTTACTGTTTAGTTAGTGAAGTAGTCTCTTTGAATCCTTTTAAG 1248 Query 1213 GTATGGATCAGCTGGTTGGATTTTGAGAGCGAGAAACTAATCTCTTGGATGAAGATTAGT 1272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1249 GTATGGATCAGCTGGTTGGATTTTGAGAGCGAGAAACTAATCTCTTGGATGAAGATTAGT 1308 Query 1273 TCTTCTCATATGCCTTGTGGTAGGTTCCGGGTTGCAGAGAAAGCTTTGATCGAACAAGTG 1332 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct 1309 TCTTCTCATATGCCTTGTGGTAGGTTCCGGGTTTCAGAGAAAGCTTTGATAGAACAAGTG 1368 Query 1333 AAACCATTCTCTCACCTTGTCAACTGCGAAAGGGCTGCACGAGAAGTATACCAAATATAT 1392 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1369 AAACCATTCTCTCACCTTGTCAACTGCGAAAGGGCTGCACGAGAAATATACCAAATATAT 1428 Query 1393 CCCAGGAAAGGCTCGGTTTGGGCAGTCTACTCAGATACAAATTCAGGTCCTCAGAGAAGA 1452 || | |||||||||||||||||||||||||||||| |||||| |||||| |||||||||| Sbjct 1429 CCAAAGAAAGGCTCGGTTTGGGCAGTCTACTCAGAGACAAATCCAGGTCTTCAGAGAAGA 1488 Query 1453 AAGACCAGACGCTATGAGATTGTCGTGTGCTTGACGATGTATACTGATGCATATGGCTTG 1512 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct 1489 AAGACCAGACGCTATGAGATTGTCGTATGCTTGACAATGTATACTGATGCATATGGATTA 1548 Query 1513 AGTGTGGCATATTTGGAGAAGGTAAACGACTGTAGCAACTTGTTCAAGAGACGGGATTAC 1572 ||||| ||||||||||||||||| ||||||| ||||||| |||||||||||||||||||| Sbjct 1549 AGTGTAGCATATTTGGAGAAGGTTAACGACTATAGCAACCTGTTCAAGAGACGGGATTAC 1608 Query 1573 GGGTACAATGCAGTCAGGTGGGTCGAGAAAGATGATGTTGCAGCCTTGCTCTCTCATCAG 1632 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1609 GGGTATAATGCAGTCAGGTGGGTCGAGAAAGAAGATGTTGCAGCCTTGCTCTCTCATCAG 1668 Query 1633 ATTCCGGCCAAGAAGCTGCCTGAAGATGAATCTGGAGCTGATCTGAAAGAGTCTTGGGTG 1692 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1669 ATTCCGGCCAAGAAGCTGCCTGAAGATGAATCTGGAGCTGATCTGAAAGAGTCTTGGGTG 1728 Query 1693 CTTGATCTTGCTTCTGTTCCTCCTGACTTGGTTTCTGCCACTTAG 1737 |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1729 CTTGATCTTGCTTCTGTTCCTCCTGATTTGGTTTCTGCCACTTAG 1773 Score = 595 bits (322), Expect = 4e-169 Identities = 358/376 (95%), Gaps = 0/376 (0%) Strand=Plus/Plus Query 1 ATGGCGTCTGTATCAGACTCAGAAGTAGAAAAGGAATCCATACACCATAAAGCACTAGCG 60 ||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ATGGCTTCTGGATCAGACTCAGAAGTAGAAAAGGAATCCATACACCACAAAGCACTAGCG 60 Query 61 GAATCGAGTTTCAATTGCGGTGATTTGATGTCGGCGTTAACTCACGCGCGGAAAGCTCTC 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 61 GAATCGAGTTTCAATTGCGGTGATTTGATGTCGGCCTTAACTCACGCGCGGAAAGCTCTC 120 Query 121 AGCTTGTCTCCGAACGCGGAAGGTTTATCCGCCATGGTCACCGCTTTCGAGATTATCAGC 180 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 121 AGCTTGTCTCCGAACACGGAAGGTTTATCCGCCATGGTCACCGCTTTCGAGATCATCAGC 180 Query 181 TCCGCCGCAACAGTCGCTGGAGGTTTGCCGGAATGGTACAAGGTTCTAAAGGTAGAGCCT 240 |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 181 TCCGCCGCCACAGTCGCCGGAGGTTTTCCGGAATGGTACAAGGTTCTAAAGGTAGAGCCT 240 Query 241 TTTTCTCATATCAATACCATTAAACAACAGTATAGGAAGCTAGCTTTGGTGTTGCATCCT 300 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 241 TTTTCTCATATTAATACCATAAAACAACAGTATAGGAAGCTAGCTTTGGTGTTGCATCCT 300 Query 301 GATAAGAATCCATACGTGGGATGCGAGGAGGGATTCAAGCTTTTGAATGAGGCTTTTAGG 360 ||||||||||| || ||||| || |||||||| ||||| |||||||||||||| |||||| Sbjct 301 GATAAGAATCCGTATGTGGGGTGTGAGGAGGGGTTCAAACTTTTGAATGAGGCCTTTAGG 360 Query 361 GTTTTCTCTGATAAGG 376 |||||||||||||||| Sbjct 361 GTTTTCTCTGATAAGG 376 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85893132495 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5