BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482546
Length=1743
Score E
Sequences producing significant alignments: (Bits) Value
AT2G35740.1 | Symbols: ATINT3, INT3 | nositol transporter 3 | c... 2765 0.0
AT4G16480.1 | Symbols: ATINT4, INT4 | inositol transporter 4 | ... 872 0.0
AT2G35738.1 | Symbols: | other RNA | chr2:15023559-15025465 FO... 640 0.0
> AT2G35740.1 | Symbols: ATINT3, INT3 | nositol transporter 3 |
chr2:15024489-15026414 REVERSE LENGTH=1743
Length=1743
Score = 2765 bits (1497), Expect = 0.0
Identities = 1663/1745 (95%), Gaps = 4/1745 (0%)
Strand=Plus/Plus
Query 1 ATGGGGGAAGAAGCAACAAAAACAGAGGAGATAAATTTCACAGAGGTGTGGACGACAACA 60
|||| |||||||||| | ||| ||||| |||||||| ||||||||||||||||||| |||
Sbjct 1 ATGGTGGAAGAAGCATCGAAATCAGAGCAGATAAATATCACAGAGGTGTGGACGACGACA 60
Query 61 TGGGAGACCCCTTACATTATGCGGCTGGCTCTCTCGGCTGGTATTGGAGGACTCCTCTTC 120
|||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 61 TGGGAGACACCTTACATTATGCGGCTGGCTCTCTCTGCCGGTATTGGAGGACTCCTCTTC 120
Query 121 GGGTACAACACGGGAGTCATCGCAGGGGCTCTTCTCTACATAAAAGAGGAGTTTGGTGAC 180
|| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 121 GGATACAACACGGGAGTCATCGCAGGGGCTCTTCTCTATATAAAAGAGGAGTTTGGTGAG 180
Query 181 GTAGACAACAAGACATGGCTCCAGGAGATCATTGTGAGCATGACCGTGGCTGGAGCCATT 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 181 GTAGACAACAAGACATGGCTTCAGGAGATCATTGTGAGCATGACCGTGGCTGGAGCCATT 240
Query 241 GTTGGAGCAGCTATAGGAGGATGGTACAACGATAAGTTTGGTAGGAGGACGTCCGTTCTT 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 241 GTTGGAGCAGCTATAGGAGGATGGTACAACGATAAGTTTGGTAGGAGGATGTCTGTTCTT 300
Query 301 ATTGCCGATGTGCTCTTCCTGGTGGGTGCCCTGGTGATGGTGGTCGCTCATGCGCCCTGG 360
|| || ||||||||||||||| |||||||||||||||||||| | ||||||||||| |||
Sbjct 301 ATAGCGGATGTGCTCTTCCTGCTGGGTGCCCTGGTGATGGTGATTGCTCATGCGCCGTGG 360
Query 361 GTCATCATCCTCGGCAGACTCTTAGTGGGTTTTGGGGTTGGTATGGCTTCCATGACCTCA 420
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 361 GTCATCATCCTCGGCAGACTCTTGGTGGGTTTTGGGGTTGGTATGGCTTCTATGACCTCA 420
Query 421 CCGCTTTACATATCTGAGATGTCTCCTGCGAGAATCAGAGGCGCCTTGGTCAGCACCAAC 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 CCGCTTTACATCTCTGAGATGTCTCCTGCGAGAATCAGAGGCGCCTTGGTCAGCACCAAC 480
Query 481 GGACTTCTCATCACCGGAGGACAGTTTCTGTCTTATCTCATCAACCTCGCCTTTGTCCAT 540
||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct 481 GGACTTCTCATCACCGGAGGACAGTTTCTATCTTATCTCATCAACCTTGCCTTCGTCCAT 540
Query 541 ACACCGGGTACATGGAGGTGGATGTTGGGAGTCTCGGCGATTCCGGCAATCATTCAGTTC 600
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 541 ACACCGGGTACATGGAGGTGGATGTTGGGAGTCTCGGCGATTCCAGCGATCATTCAGTTC 600
Query 601 TGTCTCATGCTAACGCTACCAGAGTCTCCGCGGTGGCTCTACAGAAATGATAGGAAAGCC 660
|| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 601 TGCCTCATGCTAACGCTGCCAGAGTCTCCACGGTGGCTCTATAGAAATGATAGGAAAGCC 660
Query 661 GAGTCAAGAGACATCCTCGAGAGAATATACCCGGCAGAGATGGTTGAAGCGGAGATAGCT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GAGTCAAGAGACATCCTCGAGAGAATATACCCGGCAGAGATGGTTGAAGCGGAGATAGCT 720
Query 721 GCACTCAAGGAGTCTGTCCTGGCAGAGACGGCCGACGAGGATATTATCGGCCATACCTTC 780
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 721 GCACTCAAGGAGTCTGTCCGGGCAGAGACGGCTGACGAGGATATTATCGGCCATACCTTC 780
Query 781 TCCGATAAACTCAGAGGCGCTCTCTCGAATCCAGTTGTCCGCCACGGCCTGGCCGCAGGT 840
|| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 781 TCTGATAAGCTCAGAGGCGCTCTCTCGAATCCAGTTGTCCGCCACGGTCTGGCCGCAGGT 840
Query 841 ATCACCGTCCAGGTCGCCCAGCAGTTTGTGGGAATCAACACAGTCATGTACTACAGTCCC 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 ATCACCGTCCAGGTCGCCCAGCAGTTTGTGGGAATCAACACAGTCATGTACTACAGTCCT 900
Query 901 ACTATTCTGCAGTTTGCAGGTTATGCATCCAACAAGACAGCCATGGCTCTTGCTCTCATA 960
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 901 ACTATTCTGCAGTTTGCAGGTTACGCATCCAACAAGACAGCCATGGCTCTTGCTCTCATA 960
Query 961 ACCTCCGGTCTCAATGCAGTGGGGTCGGTAGTAAGCATGATGTTTGTAGATCGTTATGGT 1020
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 961 ACCTCCGGTCTCAATGCAGTGGGGTCTGTAGTAAGCATGATGTTTGTAGACCGTTATGGT 1020
Query 1021 CGGCGCAAGCTTATGATCGTTTCCATGTTCGGGATCATATCTTGTCTTATCATATTGGCT 1080
|||||||||||||||||| |||||||||||||||||||| |||| ||| |||| ||||||
Sbjct 1021 CGGCGCAAGCTTATGATCATTTCCATGTTCGGGATCATAACTTGCCTTGTCATTTTGGCT 1080
Query 1081 GCCGTCTTCAATGAAGCCTCAAACCACGCTCCCAAGATCGATAAGAGAGACTCCAGAAAT 1140
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1081 GCCGTTTTCAATGAAGCCTCAAACCACGCTCCAAAGATCGATAAGAGAGACTCCAGAAAC 1140
Query 1141 TTTGCTCGAAATGCTACTTGTCCCGCATTTGCCCCATTCACAGCCTCCCGTGCTCCTCCC 1200
|| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1141 TTCGCAAAAAATGCTACTTGTCCCGCATTTGCCCCATTCACAGCCTCCCGTTCTCCTCCC 1200
Query 1201 TCCAACTGGAACTGTATGAAGTGTCTT-AGATACGATTGCGGATTCTGCTCCAACGGAGC 1259
||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 1201 TCCAACTGGAATTGTATGAAGTGTCTTCA-ATACGATTGCGGATTCTGCTCCAACGGAGC 1259
Query 1260 ACAGGAGTACGCACCTGGAGCCTGCGTTGTTCAGTCTGCTGATATGAAGGCATTGTGCCA 1319
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1260 ACAGGAGTACGCACCTGGAGCATGCATTGTTCAGTCTGCTGATATGAAGGCATTGTGCCA 1319
Query 1320 CTCTAAAGGCCGAACCTTCTTCAAAGACGGATGCCCCAGCAAGTTCGGGTACCTGGCCAT 1379
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 CTCGAAAGGCAGAACCTTCTTCAAAGACGGATGCCCCAGCAAGTTCGGGTACCTGGCCAT 1379
Query 1380 CGTCTTCCTCGGGCTCTACATCATTGTGTACGCTCCCGGTATGGGCACAGTTCCATGGAT 1439
|||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1380 TGTCTTCCTTGGCCTCTACATCATTGTGTACGCGCCCGGTATGGGCACAGTTCCATGGAT 1439
Query 1440 TGTCAACTCAGAGATCTATCCTCTTCGCTACAGAGGGCTTGCGGGAGGAATCGCTGCAGT 1499
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1440 TGTCAACTCAGAGATCTATCCTCTTCGCTACAGAGGGCTCGCGGGAGGAATCGCTGCAGT 1499
Query 1500 CTCAAACTGGATGTCGAATCTCGTCGTGAGTGAGACGTTCCTGACACTT-ACAAACGCGG 1558
||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||| |
Sbjct 1500 CTCAAACTGGATGTCAAATCTCGTAGTGAGTGAGACGTTCCTGACA-TTGACAAACGCAG 1558
Query 1559 TCGGGTCATCAGGAACATTCCTTCTATTTGCAGGGTCCTCGGCAATCGGGCTGTTCTTCA 1618
|||||||||| |||||||||||||||||||||||||| || ||| |||||||||||||||
Sbjct 1559 TCGGGTCATCGGGAACATTCCTTCTATTTGCAGGGTCATCCGCAGTCGGGCTGTTCTTCA 1618
Query 1619 TCTGGCTGCTTGTGCCTGAGACCAAAGGGCTTCAGTTTGAGGAAGTGGAGAAGTTGTTAG 1678
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1619 TCTGGCTGCTTGTGCCTGAGACCAAAGGGCTTCAGTTTGAGGAAGTGGAAAAGTTGCTAG 1678
Query 1679 AAGGAGGGTTTAGGCCTAGTTTGTTGCGGCCGACGACCAGGGAAAATCAAGTGGAAACGC 1738
|||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||
Sbjct 1679 AAGGAGGGTTTAGGCCTAGTTTATTGCGGCCAACGACCAAGGAAAATCAAGTGGAAACGC 1738
Query 1739 CTTAG 1743
|||||
Sbjct 1739 CTTAG 1743
> AT4G16480.1 | Symbols: ATINT4, INT4 | inositol transporter 4
| chr4:9291119-9293203 FORWARD LENGTH=1996
Length=1996
Score = 872 bits (472), Expect = 0.0
Identities = 1303/1703 (77%), Gaps = 62/1703 (4%)
Strand=Plus/Plus
Query 37 TTCACAGAGGTG-TGGACG-ACAACATGGGAGACCCCTTACATTATGCGGCTGGCTCTCT 94
|||||||| ||| |||| | ||||||||| |||| |||||||| ||||| || |||||||
Sbjct 167 TTCACAGA-GTGTTGGA-GAACAACATGGAAGACACCTTACATCATGCGACTTGCTCTCT 224
Query 95 CGGCTGGTATTGGAGGACTCCTCTTCGGGTACAACACGGGAGTCATCGCAGGGGCTCTTC 154
| || || || ||||| || |||||||| ||| | || |||||||| | || |||||||
Sbjct 225 CCGCCGGAATCGGAGGTCTTCTCTTCGGTTACGATACCGGAGTCATTTCCGGAGCTCTTC 284
Query 155 TCTACATAAAAGAGGAGTTTGGTGACGTAGACAACAAGACATGGCTCCAGGAGATC-ATT 213
| | ||| ||||| || |||| ||| || || || || |||||||| || | | | |||
Sbjct 285 TTTTCATCAAAGAAGATTTTGATGAAGTTGATAAGAAAACATGGCTTCA-GTCAACTATT 343
Query 214 GTGAGCATGACCGTGGCTGGAGCCATTGTTGGAGCAGCTA-TAGGAGGATGGTA-CAACG 271
|| || ||| | |||||||||||||| || |||||||| | | ||||| ||| | ||| |
Sbjct 344 GTTAGTATGGCAGTGGCTGGAGCCATCGTCGGAGCAGC-AGTCGGAGGTTGG-ATCAATG 401
Query 272 ATAAGTTTGGTAGGAGGACGTCCG-TTCTTATTGCCGATGTGCTCTTCCTGGTGGGTGCC 330
|||||||||||||||||| || || ||||||| |||||||| || ||| || | |||||
Sbjct 402 ATAAGTTTGGTAGGAGGATGT-CGATTCTTATCGCCGATGTTCTTTTCTTGATCGGTGCG 460
Query 331 CTGGTGATGGTGGTCGCTCATGCGCCCTGGGTCATCATCCTCGGCAGACTCTTAG-TGGG 389
| ||||||| | |||| || || ||||| |||||| | || ||| |||| | ||||
Sbjct 461 ATTGTGATGGCATTTGCTCCGGCTCCTTGGGTTATCATCGTTGGAAGAATCTTTGTTGGG 520
Query 390 TTTTGGGGTTGGTATGGCTTCCATGACCTCACCGCTT-TACATATCTG-AGATGTCTCCT 447
||||| |||||||||||||| ||||| || ||| || || || |||| || | |||||
Sbjct 521 -TTTGGTGTTGGTATGGCTTCGATGACGTCTCCG-TTGTATATCTCTGAAGCT-TCTCCG 577
Query 448 GCGAGAATCAGAGGCGC-CTTGGTCAGCACCAACGGACTTCTCATCACCGGAGGACAGTT 506
||||| || ||||| || ||| || || ||||| || ||||||||||| || ||||| |
Sbjct 578 GCGAGGATTAGAGGTGCACTT-GTTAGTACCAATGGTCTTCTCATCACTGGTGGACA-AT 635
Query 507 TC-TGTCTTATCTCATCAACCTCGCCTTTGTCCATACACCGGGTACATGGAGGTGGATGT 565
|| | || || |||||||| || || ||||||||||| ||||| |||||||| |||||||
Sbjct 636 TCTTCTCGTACCTCATCAATCTTGCTTTTGTCCATACTCCGGGAACATGGAGATGGATGT 695
Query 566 TGGGAGTCT-CGGCGA-TTCCGGCAATCATTCAGTTCTGT-CTCATGCTAACGCTACCAG 622
|||| || | ||| || |||| || || ||||||| ||| || ||| | ||||||| |
Sbjct 696 TGGGTGT-TGCGG-GAGTTCCAGCTATTGTTCAGTT-TGTGCTTATGTTGTCGCTACCTG 752
Query 623 AGTCTCCGCGGTGGCTCTACAGAAATGATAGGAAAGCCGAGTCAAGAGAC-ATCCTCGAG 681
||||||| ||||| | || ||||| || |||| || || || |||| | || || |||
Sbjct 753 AGTCTCCAAGGTGGTTATATAGAAAGGACAGGATTGCGGAATCCAGAG-CGATTCTTGAG 811
Query 682 AGAATATACCCGGCAGA-GATGGTTGAAGCGGAGATAGCTGCACTCAAGGAGTCTGTCCT 740
|| || |||||||| || || || || |||||||| | || | || ||| ||
Sbjct 812 AGGATTTACCCGGCTGACGA-AGTGGAGGCGGAGATGGAAGCTTTGAAACTGTCAGTGGA 870
Query 741 GGCAGAGACGGCCGACGAGG-ATATTATCGGCCATACCTTCTCCGATAAA-CTCAGAGGC 798
|||||||| || ||||||| | || || || ||| |||||| | ||| || | |||
Sbjct 871 GGCAGAGAAAGCAGACGAGGCA-ATCATTGGAGATAGCTTCTCTG-CAAAGCTGAAAGGA 928
Query 799 GCTCTCTCGAATCCAGTTGTCCGCCACGGCCTGGCCGCAGGTATCACCGTCCAGGTCGCC 858
||| || |||||| ||||| || | || || || || |||||||| || || || ||
Sbjct 929 GCTTTCGGGAATCCCGTTGTTCGACGTGGACTCGCTGCTGGTATCACGGTGCAAGTGGCT 988
Query 859 CAGCAGTTTGTGGGAATCAACACAGTCATGTACTACAGTCCCACTATTCTGCAGTTTGCA 918
|||||||||||||| |||||||| ||||||||||||||||| ||||| |||| |||||
Sbjct 989 CAGCAGTTTGTGGGGATCAACACTGTCATGTACTACAGTCCTTCTATTGTGCAATTTGCT 1048
Query 919 GGTTATGCATCCAACAAGACAGCCATGGCTCTTG-CTCTCATAACCTCCGGTCTCAATGC 977
||||| || || ||||||||||| ||||| |||| |||| || || |||||| | |||||
Sbjct 1049 GGTTACGCCTCTAACAAGACAGCTATGGC-CTTGTCTCTTATTACTTCCGGTTTGAATGC 1107
Query 978 AGTGGGGTCGGTAGTAAGCATGATGTTTGTAGATCGTTATGGTCGGCGCAAGCTTATGAT 1037
|||| || | || |||||||||||||| ||||| || || | | ||||| |||||
Sbjct 1108 TTTGGGTTCTATTGTGAGCATGATGTTTGTCGATCGGTACGGGAGAAGGAAGCTCATGAT 1167
Query 1038 CGTTTCCATGTTCGGGATCATATCTTGTCTTATCATATTGGCTGCCGTCTTC-AATGAAG 1096
| | || ||||| ||||||||| | ||||||||||| || || | || ||| | |||
Sbjct 1168 CATCTCTATGTTTGGGATCATAGCATGTCTTATCATCTTAGCCACGGTGTTCTCA-CAAG 1226
Query 1097 CCTCAAACCACGCTCCCAAGATCGATAAGAGAGACTCCAGAAATTTTGCTCGAAATGCTA 1156
| | | |||||| |||||||||||| | || || || | ||||| | ||||||||
Sbjct 1227 CGGCCATCCACGCCCCCAAGATCGATGCGTTTGAGTCAAGGACGTTTGCACCAAATGCTA 1286
Query 1157 CTTGTCCCGCATTTGCCCCAT-TCACAGCCTCCCGTGCTCCTCCCTCCAACTGGAACTGT 1215
||||| | |||| |||||| | || ||||| |||||||||||| | ||||||||
Sbjct 1287 CTTGTTCAGCATATGCCCC-TCTCGCAGCCGAAAATGCTCCTCCCTCGAGGTGGAACTGC 1345
Query 1216 ATGAAGTGTCTTAGATACGATTGCGGATTCTGCTCCAACGGAGCACAGGAGTACGCACCT 1275
||||||||||| || | ||| || ||||||||| ||| ||| | |||| |||||||||
Sbjct 1346 ATGAAGTGTCTCAGGTCCGAATGTGGATTCTGCGCCAGCGGGGTACAGCCGTACGCACCA 1405
Query 1276 GGAGCCTGCGT--TGTTCAGTCTGCTGATATGAAGGC-ATTGTGCCA-CTCTAA-AGGCC 1330
||||| || || |||| ||| | ||| ||||| || | | || || ||| || |||
Sbjct 1406 GGAGCATGTGTGGTGTT--GTCAGATGACATGAAAGCAACT-TG-CAGCTC-AAGAGGAA 1460
Query 1331 GAACCTTCTTCAAAGACGGATGCCCCAGCAAGTTCGGGTACCTGGCCATCGTCTTCCTCG 1390
|||| ||||||||||| ||||| || |||||||| |||| | | || || || || | |
Sbjct 1461 GAACATTCTTCAAAGATGGATGTCCAAGCAAGTTTGGGTTCTTAGCTATAGTGTTTTTGG 1520
Query 1391 GGCTCTACATCATTGTGTACGCTCCCGGTATGGGCACAGTTCCATGGATTGTCAACTCAG 1450
|||| |||||| | || ||||| || ||||||||||| || || ||||| |||||||| |
Sbjct 1521 GGCTTTACATCGTAGTCTACGCACCAGGTATGGGCACTGTCCCGTGGATCGTCAACTCTG 1580
Query 1451 AGATCTATCCTCTTC-GCTACAGAGGGCTTGCG-GGAGGAATCGCTGCAGTCTCAAACTG 1508
|||||||||| | || | |||||||| |||| | |||||||| || || ||||| || ||
Sbjct 1581 AGATCTATCCGC-TCAGATACAGAGGTCTTG-GTGGAGGAATAGCCGCCGTCTCGAATTG 1638
Query 1509 GATGTCGAATCTCG-TCGTGAGTGAGACG-TTCCTGACACTTACAAACGCGGTCGGGTCA 1566
| | || || || | | |||||||||| | ||||| |||| || | || |||| ||
Sbjct 1639 GGTCTCCAACCT-GATAGTGAGTGAGA-GCTTCCTCTCACTCACCCATGCTCTCGGCTCC 1696
Query 1567 TCAGGAACATTCCTTCTATTTGCAGGGTCCTCGGCAATCGGGCTGTTCTTCATCTGGCTG 1626
|| || || |||||||| ||||| || | ||| | |||||||| |||||||| ||| ||
Sbjct 1697 TCTGGTACCTTCCTTCTCTTTGCTGGCTTCTCCACGATCGGGCTCTTCTTCATTTGGTTG 1756
Query 1627 CTTGTGCCTGAGACCAAAGGGCTTCAGTTTGAGGAAGTGGAGAAGTTGTTAGAAGGAGGG 1686
|| || ||||||||||||||||||||||||||||| || ||||||||| | || || ||
Sbjct 1757 CTCGTTCCTGAGACCAAAGGGCTTCAGTTTGAGGAGGTCGAGAAGTTGCTCGA-GGTCGG 1815
Query 1687 TTT-AGGCCTAGTTTGTTGCGGC 1708
|| | ||| ||| | |||||||
Sbjct 1816 CTTCAAGCCCAGTCTCTTGCGGC 1838
> AT2G35738.1 | Symbols: | other RNA | chr2:15023559-15025465
FORWARD LENGTH=1075
Length=1075
Score = 640 bits (346), Expect = 0.0
Identities = 387/407 (95%), Gaps = 2/407 (0%)
Strand=Plus/Minus
Query 861 GCAGTTTGTGGGAATCAACACAGTCATGTACTACAGTCCCACTATTCTGCAGTTTGCAGG 920
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1075 GCAGTTTGTGGGAATCAACACAGTCATGTACTACAGTCCTACTATTCTGCAGTTTGCAGG 1016
Query 921 TTATGCATCCAACAAGACAGCCATGGCTCTTGCTCTCATAACCTCCGGTCTCAATGCAGT 980
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 TTACGCATCCAACAAGACAGCCATGGCTCTTGCTCTCATAACCTCCGGTCTCAATGCAGT 956
Query 981 GGGGTCGGTAGTAAGCATGATGTTTGTAGATCGTTATGGTCGGCGCAAGCTTATGATCGT 1040
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 955 GGGGTCTGTAGTAAGCATGATGTTTGTAGACCGTTATGGTCGGCGCAAGCTTATGATCAT 896
Query 1041 TTCCATGTTCGGGATCATATCTTGTCTTATCATATTGGCTGCCGTCTTCAATGAAGCCTC 1100
||||||||||||||||||| |||| ||| |||| ||||||||||| ||||||||||||||
Sbjct 895 TTCCATGTTCGGGATCATAACTTGCCTTGTCATTTTGGCTGCCGTTTTCAATGAAGCCTC 836
Query 1101 AAACCACGCTCCCAAGATCGATAAGAGAGACTCCAGAAATTTTGCTCGAAATGCTACTTG 1160
|||||||||||| |||||||||||||||||||||||||| || || ||||||||||||
Sbjct 835 AAACCACGCTCCAAAGATCGATAAGAGAGACTCCAGAAACTTCGCAAAAAATGCTACTTG 776
Query 1161 TCCCGCATTTGCCCCATTCACAGCCTCCCGTGCTCCTCCCTCCAACTGGAACTGTATGAA 1220
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 775 TCCCGCATTTGCCCCATTCACAGCCTCCCGTTCTCCTCCCTCCAACTGGAATTGTATGAA 716
Query 1221 GTGTCTT-AGATACGATTGCGGATTCTGCTCCAACGGAGCACAGGAG 1266
||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 715 GTGTCTTCA-ATACGATTGCGGATTCTGCTCCAACGGAGCACAGGAG 670
Score = 586 bits (317), Expect = 2e-166
Identities = 354/372 (95%), Gaps = 2/372 (1%)
Strand=Plus/Minus
Query 1265 AGTACGCACCTGGAGCCTGCGTTGTTCAGTCTGCTGATATGAAGGCATTGTGCCACTCTA 1324
|||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 577 AGTACGCACCTGGAGCATGCATTGTTCAGTCTGCTGATATGAAGGCATTGTGCCACTCGA 518
Query 1325 AAGGCCGAACCTTCTTCAAAGACGGATGCCCCAGCAAGTTCGGGTACCTGGCCATCGTCT 1384
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 517 AAGGCAGAACCTTCTTCAAAGACGGATGCCCCAGCAAGTTCGGGTACCTGGCCATTGTCT 458
Query 1385 TCCTCGGGCTCTACATCATTGTGTACGCTCCCGGTATGGGCACAGTTCCATGGATTGTCA 1444
|||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 457 TCCTTGGCCTCTACATCATTGTGTACGCGCCCGGTATGGGCACAGTTCCATGGATTGTCA 398
Query 1445 ACTCAGAGATCTATCCTCTTCGCTACAGAGGGCTTGCGGGAGGAATCGCTGCAGTCTCAA 1504
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 397 ACTCAGAGATCTATCCTCTTCGCTACAGAGGGCTCGCGGGAGGAATCGCTGCAGTCTCAA 338
Query 1505 ACTGGATGTCGAATCTCGTCGTGAGTGAGACGTTCCTGACACTT-ACAAACGCGGTCGGG 1563
|||||||||| |||||||| ||||||||||||||||||||| || |||||||| ||||||
Sbjct 337 ACTGGATGTCAAATCTCGTAGTGAGTGAGACGTTCCTGACA-TTGACAAACGCAGTCGGG 279
Query 1564 TCATCAGGAACATTCCTTCTATTTGCAGGGTCCTCGGCAATCGGGCTGTTCTTCATCTGG 1623
||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct 278 TCATCGGGAACATTCCTTCTATTTGCAGGGTCATCCGCAGTCGGGCTGTTCTTCATCTGG 219
Query 1624 CTGCTTGTGCCT 1635
||||||||||||
Sbjct 218 CTGCTTGTGCCT 207
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86194335765
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5