BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482609 Length=699 Score E Sequences producing significant alignments: (Bits) Value AT2G36355.1 | Symbols: | Family of unknown function (DUF662) ... 1029 0.0 AT3G52900.1 | Symbols: | Family of unknown function (DUF662) ... 414 5e-115 > AT2G36355.1 | Symbols: | Family of unknown function (DUF662) | chr2:15242376-15243431 FORWARD LENGTH=696 Length=696 Score = 1029 bits (557), Expect = 0.0 Identities = 655/700 (94%), Gaps = 15/700 (2%) Strand=Plus/Plus Query 3 ACTGAAAGCAGATAAATAGAGTTTAAGTGTTTGGAGCAGAGAAATAATCC-AAAGGAACA 61 ||||||||||||||||||||||||||||||||||||||||| | || || ||| ||||| Sbjct 9 ACTGAAAGCAGATAAATAGAGTTTAAGTGTTTGGAGCAGAG--A-AA-CCGAAACGAACA 64 Query 62 AAGAAGAACATGAATAGCACCAACTCAGGAGCTACAGCTTCGACCAAAAGCAAGATACCA 121 || ||||||||||| || |||||||||||||||||| ||||||| ||||||||||||||| Sbjct 65 AACAAGAACATGAACAGTACCAACTCAGGAGCTACAACTTCGACTAAAAGCAAGATACCA 124 Query 122 ATGGATgagaaccaagaagaagagatatggcgaaagtttcaagcccgagaagaagagatc 181 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 125 ATGGAGGAGAACCAAGAAGAAGAGATATGGCGAAACTTTCAAGCCCGAGAAGAAGAGATC 184 Query 182 gagagaaagaagaTGGCAGTTAAGGACAAGATTCAACAGCGACTTGGGTTTGCAGAAGAA 241 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 185 GAGAGAAAGAAGATGGCGGTTAAGGACAAGATTCAACAGCGACTTGGGTTTGCAGAGGAA 244 Query 242 GCCACAAGAAGCTTGACACAGACATTGGAAGGGCTAGAGATCATGGGAGATCCAATGAGG 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 GCCACAAGAAGCTTGACACAGACATTGGAAGGGCTAGAGATCATGGGAGATCCAATGAGG 304 Query 302 AAGGAAGTGGGGATGGTAAGAAAGAAAATCGAGATGGCAAATAGAGAAATCAAATCTTTG 361 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 305 AAGGAAGTGGGGATGGTAAGAAAGAAAATCGAGATGGCAAATCGAGAAATCAAATCTTTG 364 Query 362 TCTCAGAGCTGCCAGAAGAAGGAGAAGGAATACAAAGAGATCCAGGAAGCATTCGACGAA 421 ||||||||||||||||||||||||| ||||||||||||||| || || || ||||||||| Sbjct 365 TCTCAGAGCTGCCAGAAGAAGGAGAGGGAATACAAAGAGATACATGAGGCTTTCGACGAA 424 Query 422 AAGAACAAAGAGAAAGCTCACCTTGTTTCAATCTTAATGGAGCTACTGGCTGAAAGTGAA 481 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 425 AAGAACAAAGAGAAAGCACACCTTGTTTCAATCTTAATGGAGCTACTAGCTGAAAGTGAA 484 Query 482 AGAGTAAGGGTGAAGAAGCTGGAAGATATCAACAAGACTGTTGGGTCCTTGCGATAATCA 541 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 485 AGAGTAAGGGTGAAGAAGCTGGAAGAGATCAACAAGACTATTGGGTCCTTGCGATAATCA 544 Query 542 ATTCTACCTTTTACATGGGAACTTGTTTGACTGTTGAGGTTTTGGATCATTTATGGATTA 601 ||||||||||||||||||||||| |||||| | | ||||||||||||||||||||| Sbjct 545 ATTCTACCTTTTACATGGGAACT-GTTTGA--G--G---TTTTGGATCATTTATGGATTA 596 Query 602 AAATTCCTTTATTAAAGTG--AGAAAATGTGTAAAAGAATGTAATGGAAAAAAGGTTTGC 659 || ||||| || | ||||| |||||| |||||||||||||||||||||||| | ||||| Sbjct 597 AAGTTCCTCTACTGAAGTGTGAGAAAAGGTGTAAAAGAATGTAATGGAAAAACGATTTGC 656 Query 660 CTCAGGGCTTTAAGAAATTCATACCTAAAGATGGTTTTGT 699 ||||||| |||||||||||||||||||||||| |||||| Sbjct 657 CTCAGGGATTTAAGAAATTCATACCTAAAGATATTTTTGT 696 > AT3G52900.1 | Symbols: | Family of unknown function (DUF662) | chr3:19613118-19614027 FORWARD LENGTH=686 Length=686 Score = 414 bits (224), Expect = 5e-115 Identities = 329/380 (87%), Gaps = 6/380 (2%) Strand=Plus/Plus Query 157 gtttcaagcccgagaagaagagatcgagagaaagaagaTGGCAGTTAAGG-ACAAGATTC 215 |||||||||||||||||||||||||||||| ||||||||| | ||||||| | ||| ||| Sbjct 130 GTTTCAAGCCCGAGAAGAAGAGATCGAGAGGAAGAAGATGACTGTTAAGGAAAAAG-TTC 188 Query 216 AACAGCGACTTGGGTTTGCAGAAGAAGCCACAAGAAGCTTGACACAGACATTGGAAGGGC 275 ||||||| || || |||||||| ||||| |||||| |||| || || |||||||||| || Sbjct 189 AACAGCGGCTCGGTTTTGCAGAGGAAGCTACAAGATGCTTAACTCAAACATTGGAAGAGC 248 Query 276 TAGAGATCATGGGAGATCCAATGAGGAAGGAAGTGGGGATGGTAAGAAAGAAAATCGAGA 335 ||||||| ||||||||||| ||||| || ||||| || ||||| || ||||||||||| | Sbjct 249 TAGAGATTATGGGAGATCCTATGAGAAAAGAAGTTGGTATGGTGAGGAAGAAAATCGACA 308 Query 336 TGGCAAATAGAGAAATCAAATCTTTGTCTCAGAGCTGCCAGAAGAAGGAGAAGGAATACA 395 |||| ||| |||| |||||||||||| | || ||||| ||||| |||||||||||||||| Sbjct 309 TGGCGAATCGAGATATCAAATCTTTGGCACAAAGCTGTCAGAAAAAGGAGAAGGAATACA 368 Query 396 AAGAGATCCA--GGAAGCATTCGACGAAAAGAACAAAGAGAAAGCTCACCTTGTTTCAAT 453 |||| | || |||||| ||| | |||||||||||||||||||||||||||||||| || Sbjct 369 AAGACA--CATTGGAAGCTTTCAATGAAAAGAACAAAGAGAAAGCTCACCTTGTTTCCAT 426 Query 454 CTTAATGGAGCTACTGGCTGAAAGTGAAAGAGTAAGGGTGAAGAAGCTGGAAGATATCAA 513 |||||||||||||||||||||||||||||| ||||| | ||||| ||||| || ||||| Sbjct 427 GTTAATGGAGCTACTGGCTGAAAGTGAAAGATTAAGGATAAAGAAACTGGAGGAAATCAA 486 Query 514 CAAGACTGTTGGGTCCTTGC 533 |||||||||||| |||||| Sbjct 487 CAAGACTGTTGGAACCTTGC 506 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33857815078 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5