BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482645 Length=1800 Score E Sequences producing significant alignments: (Bits) Value AT2G36670.1 | Symbols: | Eukaryotic aspartyl protease family p... 2730 0.0 > AT2G36670.1 | Symbols: | Eukaryotic aspartyl protease family protein | chr2:15364788-15368158 REVERSE LENGTH=1842 Length=1842 Score = 2730 bits (1478), Expect = 0.0 Identities = 1723/1835 (94%), Gaps = 42/1835 (2%) Strand=Plus/Plus Query 1 tctctctctctctctgacagttctttttgtctctctctctGCTCGATGCGAAGAATCGAG 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 14 TCTCTCTCTCTCTCTGACAGTTCTTTCTGTCTCTCTCTCTGCTCGATGCGAAGAATCGAG 73 Query 61 CATTTGTGTCGCTCTCTGTAACGTCTGGC-TCTATCAGGAATATAACCAGAATCTCAACG 119 |||||||||||||||||| ||||| || | || ||| |||||||||||| |||||| ||| Sbjct 74 CATTTGTGTCGCTCTCTGGAACGTGTGTCTTC-ATCGGGAATATAACCATAATCTCCACG 132 Query 120 AGCTGCTTGAATGCGTATCTTTCGTTCCCTGATGTTGGCGGTGGCGT-TAGCGGTGGCTT 178 ||||||||||||||||| | |||||||||| |||||||||| ||| | |||| ||||||| Sbjct 133 AGCTGCTTGAATGCGTACCCTTCGTTCCCTAATGTTGGCGGCGGC-TCTAGCAGTGGCTT 191 Query 179 TGGCCGTGACTGAGCTCT-CAGCATCGCCGTTACCTTCGGTCTTTGCGAAATACGCAGCT 237 |||||||||||| | | | ||||||||||||||||||||| || |||||||||||||||| Sbjct 192 TGGCCGTGACTG-GTTTTGCAGCATCGCCGTTACCTTCGGCCTATGCGAAATACGCAGCT 250 Query 238 GGTCCGGCCAAGATTCTTCCTTTACAAAGGGCTTTTCCACTAGACGAGCCAGTGGAGCTG 297 |||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 251 GGTCCGACCAAGATTCTTCCTTTACAAAGGGCTTTTCCTCTAGACGAGCTAGTGGAGCTG 310 Query 298 AGTGAACTTAGAGCGCGTGATCGTGTCAGACACGCGCGAATCTTACTCGGCGGTGGTCGT 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 311 AGTGAACTTAGAGCGCGTGATCGTGTCAGACACGCGCGAATCTTACTCGGCGGTGGTCGT 370 Query 358 CAGAGCTCTGTTGGCGGCGTCGTCGACTTCCCAGTTCAAGGCTCCTCCGATCCTTA-C-C 415 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | Sbjct 371 CAGAGCTCTGTTGGCGGCGTCGTCGACTTCCCAGTTCAAGGCTCTTCCGATCCTTACCTC 430 Query 416 -TC-G-T---AG--G-----GCTTTATTTCACAAAGGTCAAATTAGGTTCTCCTCCTACA 462 || | | || | |||||||||||||||||||||||||||||||||||||||| Sbjct 431 GTCGGCTCCAAGATGACTATGCTTTATTTCACAAAGGTCAAATTAGGTTCTCCTCCTACA 490 Query 463 GAATTCAATGTTCAGATTGATACTGGAAGTGACATCTTGTGGGTTACTTGTAGTTCTTGC 522 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 491 GAGTTCAATGTTCAGATTGATACTGGAAGTGACATCTTGTGGGTTACTTGTAGTTCTTGC 550 Query 523 AGTAATTGCCCTCACTCTAGTGGACTTGGAATCGACCTTCATTTCTTTGATGCTCCTGGT 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 551 AGTAATTGCCCTCACTCTAGTGGACTTGGAATCGACCTTCATTTCTTTGATGCTCCTGGT 610 Query 583 TCCTTCACTGCTGGCTCTGTTACTTGTTCAGATCCGATTTGTTCTTCAGTTTTTCAGACG 642 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 611 TCCTTGACTGCTGGCTCTGTTACTTGTTCAGATCCGATTTGTTCTTCAGTTTTTCAGACG 670 Query 643 ACAGCTGCTCAATGTTCTGAGAATAACCAGTGTGGTTACTCCTTTCGCTATGGCGATGGA 702 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 671 ACAGCTGCACAATGTTCTGAGAATAACCAGTGTGGTTACTCCTTTCGCTATGGCGATGGA 730 Query 703 AGTGGGACTTCAGGTTACTACATGACTGACACGTTCTATTTTGATGCGATTTTGGGAGAG 762 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 731 AGTGGGACTTCAGGTTACTACATGACTGACACCTTCTATTTTGATGCGATTTTGGGAGAG 790 Query 763 TCTTTGGTTGCAAACTCATCTGCTCCCATTGTTTTTGGCTGTAGTACCTACCAGTCCGGG 822 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct 791 TCTTTGGTTGCAAACTCATCTGCTCCCATTGTTTTCGGCTGTAGTACCTACCAATCTGGG 850 Query 823 GACTTGACAAAGTCAGACAAAGCAGTCGATGGTATATTTGGATTCGGCAAGGGAAAGTTG 882 |||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||| Sbjct 851 GACTTGACAAAGTCAGACAAAGCAGTGGATGGAATCTTTGGTTTCGGCAAGGGAAAGTTG 910 Query 883 TCCGTTGTTTCTCAATTGTCGTCAAGAGGGATTACGCCGCCAGTGTTTTCTCATTGCTTG 942 || ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 911 TCAGTTGTCTCTCAGTTGTCATCACGAGGGATTACGCCGCCAGTGTTTTCTCATTGCTTG 970 Query 943 AAAGGAGATGGTAGTGGAGGTGGTGTATTTGTCCTTGGCGAGATATTGGTCCCAGGAATG 1002 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 971 AAAGGAGATGGTAGTGGAGGTGGTGTCTTTGTCCTTGGCGAGATATTGGTCCCAGGAATG 1030 Query 1003 GTTTACAGTCCTCTCGTTCCATCACAGCCTCACTATAACTTAAATCTGCTGAGCATTGGC 1062 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1031 GTTTACAGTCCTCTCGTTCCATCACAACCTCACTATAACTTAAATCTGCTGAGCATTGGC 1090 Query 1063 GTGAATGGACAGATGCTGCTCA-TCGATGCAGCGGTGTTTGAAGCATCAAATACCCGTGG 1121 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 1091 GTGAATGGACAGATGCTGC-CACTCGATGCAGCGGTGTTTGAAGCATCAAATACCCGTGG 1149 Query 1122 AACTATTGTTGACACGGGAACCACATTGACATATCTGGTGAAAGAGGCTTATGACCCTTT 1181 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | ||| Sbjct 1150 AACTATTGTTGACACAGGAACCACTTTGACATATCTGGTGAAAGAGGCTTATGATCTTTT 1209 Query 1182 TCTCAATGCTATATCAAACAGCGTGTCACAGTTGGTCACACCGATCATTTCTAATGGAGA 1241 |||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct 1210 TCTCAATGCTATATCAAACAGCGTGTCACAGTTGGTAACACCAATAATTTCTAATGGAGA 1269 Query 1242 GCAGTGCTATTTGGTCTCGACTAGCATAAGTGACATGTTTCCTCCAGTTAGTCTCAACTT 1301 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1270 GCAGTGCTATTTGGTCTCGACTAGCATAAGTGACATGTTTCCTTCAGTTAGTCTCAACTT 1329 Query 1302 TGCTGGTGGTGCATCAATGATGTTAAGGCCTCAGGACTACTTATTTCATTATGGTTTCTA 1361 ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| Sbjct 1330 TGCTGGTGGTGCATCAATGATGTTAAGACCTCAGGACTACTTATTTCATTACGGTATCTA 1389 Query 1362 TGATGGTGCGTCCATGTGGTGCATTGGTTTTCAGAAAGCTCCGGAAGAACAAACCATTTT 1421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1390 TGATGGTGCGTCCATGTGGTGCATTGGTTTTCAGAAAGCTCCGGAAGAACAAACCATTTT 1449 Query 1422 AGGAGATCTTGTACTTAAAGACAAAGTCTTTGTGTATGATCTTGCTCGGCAACGGATTGG 1481 |||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct 1450 AGGAGATCTTGTGCTTAAAGATAAAGTCTTTGTATATGATCTTGCTCGACAACGGATTGG 1509 Query 1482 ATGGGCAAACTATGATTGTTCGATGTCTGTGAATGTATCGGTAACTTCAGGAAAGGATAT 1541 |||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct 1510 ATGGGCAAGCTATGATTGTTCAATGTCTGTGAATGTATCGATAACTTCAGGAAAGGATAT 1569 Query 1542 TGTAAACTCAGGCCAGCCATGTTTGAACATCTCAACAAGAGAAATACTCTTAAGATTCTT 1601 |||||||||||| ||||||||||||||||||||||||||||| |||||| || |||| || Sbjct 1570 TGTAAACTCAGGGCAGCCATGTTTGAACATCTCAACAAGAGACATACTCATACGATTATT 1629 Query 1602 CTTTAGCATCTTAGT-GGCTTTACTTCTTTGTATTTTCTTCTCCTTGACGTAAATTTATA 1660 ||||||||||||| | || ||||||||||||||| ||||||||||||||||||||| ||| Sbjct 1630 CTTTAGCATCTTATTTGG-TTTACTTCTTTGTATCTTCTTCTCCTTGACGTAAATTGATA 1688 Query 1661 GAATT-TGTGGGTTTGTTTTAGAGTAGTGTAGTAATAGTGCCTTTTAATTGTAGATCAGT 1719 || || |||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 1689 GA-TTATGTGGGTTTGTTTTAGAGTAGTGTAGTAGTAGTGCCTTTTAACTGTAGATCAGT 1747 Query 1720 CTCATTGTGAAGGAAATATGGTTACTTGT-----A-A-CTATAATACTGCAGGCCT-AA- 1770 ||||||||||||||| ||||||||||||| | | |||||||| ||||||| | || Sbjct 1748 CTCATTGTGAAGGAA-TATGGTTACTTGTGGCCTATAACTATAATATTGCAGGCATGAAT 1806 Query 1771 -A--A--CGACAATTACTAAAGCAAATCAGTTTAG 1800 | | |||||||||| ||||||||||| ||||| Sbjct 1807 GATGAAACGACAATTACCAAAGCAAATCATTTTAG 1841 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89055766830 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5