BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482652
Length=3506
Score E
Sequences producing significant alignments: (Bits) Value
AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/... 4903 0.0
AT4G01590.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 126 1e-27
> AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type
zinc finger domain | chr2:15393071-15399418
FORWARD LENGTH=3629
Length=3629
Score = 4903 bits (2655), Expect = 0.0
Identities = 2977/3129 (95%), Gaps = 36/3129 (1%)
Strand=Plus/Plus
Query 352 CAGTTCGGTTTGGCAATCTCCGGTTAAGCGGTTGGCCT-TTGACGGTGAGTGTGGTGAGG 410
||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||
Sbjct 406 CAGTTCGGTTTGGCAATCTCCGGTTAAGCGGTTGG-CTGTAGACGGCGAGTGTGGTGAGG 464
Query 411 CTGGTGATAGGAGTAGGACTAGCTGTAAGAGAATTAAAACGACTCAGGTCAATGGTTTTA 470
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 465 CTGGTGATAGGAGTAGGACTAGCTGTAAGAGAATTAAAACGACTCAAGTCAATGGTTTTA 524
Query 471 TTGTTTACACTAGAACTAGGAAGACTAAATTCACCAAGCTTCATGAACAAGGAGATGAAA 530
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 525 TTGTTTACACTAGAACTAGGAAGACTAAATTCACCAAGCTTCATGAACAAGAAGATGAAA 584
Query 531 ATGCTGGATTGTTGGAA--A-ATCGA--ATGTC-AAATCATCTTGAGGAG-T-CGAA--A 580
||||||||||| | ||| | |||| | ||| ||| || | | || | | | ||
Sbjct 585 ATGCTGGATTG-TCGAATCATCTCGAGGA-GTCGAAACCAACGAGTGGTGTTAC-AAGTG 641
Query 581 CCAACAAATGGTGCTA-----C-AAATGGCTCGATAGGTGAAACTAAAGTTAGTGGGAAC 634
| | ||||| || | | ||||| ||||||||||||| |||||||||| |
Sbjct 642 GCTTC-GGTGGTGATATGTGTCGCAGCAGCTCGGTAGGTGAAACTAACGTTAGTGGGAGC 700
Query 635 TCTTGTATTAAGAATACATTTGTTGAGAGCCCCGCCGGGAAAATTGATGTGGA-AGAGCG 693
|||||| ||||||||||| ||||||||||| || |||||||| | | ||| || ||||||
Sbjct 701 TCTTGTGTTAAGAATACACTTGTTGAGAGCTCCTCCGGGAAAGTCGTTGT-GATAGAGCG 759
Query 694 GTTAGTTACTGGCAGCTTAGCTGAAAGTCCGGCAGTTGTGACTGACAGTAGCTCATTAGT 753
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 760 GTTAGTTACTGGCGGCTTAGCTGAAAGTCCGGCAGTTGAGACTGACAGTAGCTCATTAGT 819
Query 754 CGACGTTGTAATTGACGACATCAATTTTGTAGAATTGTTACATGAAGAGATTCCTGTTGA 813
|| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 820 GGATGTTGTAATTGACGACATCAATTTTGTGGAATTGTTACATGAAGCGATTCCTGTTGA 879
Query 814 AATTCTGTCTGAAGGAAGCCTGGATTTTGAGGT-AAAGAGACTAGGAACTAAAGTTAGAA 872
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 880 AATTCTGTCTGAAGGAAGCCTGGATTTTGAGGTGAAA-AGACTAGGAACTAAAGTTAGAA 938
Query 873 CCATGGGAAAATCTTATAGCGTCTCAGAGAAGAAAAGGCATGGATCTTTTAAACGTACAG 932
||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||
Sbjct 939 CCATGGGAAAATCCTATAGCGTCTCGGAGAAGAAAAAGCATGGATCTTTTAAGCGTACAG 998
Query 933 CACAGATCTATAAATCTATTGTGAGAATGAAGAAGGTAAACAATTTGGTGCCTGAGAATG 992
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 999 CACAGATCTATAAATCTATTGTGAGAATGAAGAAGGTAAATAATTTGGTCCCTGAGAATG 1058
Query 993 TAGAGGTTCTTGCGGAACCAGACTTTGGCCATGAGGGATTAGATGAACAGAGTCATTCTG 1052
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1059 TAGAGGTTCTTGCGGAACCAGACTTTGGCCGTGAGGGATTAGATGAACAGAGTCATTCTG 1118
Query 1053 TCAGT-TTGGCGGACAAGTCCATTTTAATCCGCAGGAGGCCAGAAACAGTGAGGGGA-CT 1110
||||| || |||||||||||||||||||||||||| |||||||||||||||| |||| ||
Sbjct 1119 TCAGTCTT-GCGGACAAGTCCATTTTAATCCGCAGCAGGCCAGAAACAGTGA-GGGATCT 1176
Query 1111 TTTTGAGACCGGTATACTCGATGGTTTGTCTGTGGTTTACACGGGTACTGTTAAGTCTCA 1170
||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1177 TTTTGAGACCGGTTTACTCGATGGTTTGTCGGTGGTTTACATGGGTACTGTTAAGTCTCA 1236
Query 1171 AGCCTTTGGTCTCCGTGGCATCATTAAAGATGGTGGAATTTTGTGCTCATGTTCCTCATG 1230
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1237 AGCCTTTCCTCTCCGTGGCATCATTAGAGATGGTGGAATTTTGTGCTCATGTTCCTCATG 1296
Query 1231 TGATTGGGCTCATGTTATTTCAACTTCCAAATTTGAGATTCATGCTTGTAAACAATACAG 1290
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1297 TGATTGGGCTAACGTTATTTCAACTTCCAAATTTGAGATTCATGCTTGTAAACAATACCG 1356
Query 1291 ACGAGCATCACAATACATTTGCTTTGAGAATGGTAAGAGCCTGCTAGATGTTTTAAATAT 1350
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1357 AAGAGCATCACAATACATTTGCTTTGAGAATGGTAAGAGCCTGCTAGATGTTCTAAATAT 1416
Query 1351 AAGTAGGAACACTCCTCTACATGCTCTCGAAGCAACAATTCTGGCTGCTGTTGATTATGC 1410
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1417 AAGTAGGAACACTCCTCTACATGCTCTCGAAGCAACAATTCTGGATGCTGTTGATTATGC 1476
Query 1411 GTCTAAAGAAAAATGTTTTACCTGTAAAAGATGCAAAGGTTCCTTCCCTTTCTCCTCTCT 1470
|||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1477 ATCTAAAGAAAAACGTTTTACCTGTAAAAGATGCAAAGGTCCCTTCCCTTTCTCCTCTCT 1536
Query 1471 TGGCCATAGAGGGTTTCTGTGTATGTCATGCTCGGAGGTAGAAACTTCTCAGGCCAGCCC 1530
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1537 TGGCCATAGAGGGTTTCTGTGTAAGTCATGCTCGGAGGTAGAAACTTCTCAGGCCAGCCT 1596
Query 1531 TGCTGCTACGAGGACCTCAACGAGTGCTCCTGCATGCATAGCATCTCCCGTTAAGAGTAG 1590
|||||| || ||||||||||| ||||||||||| |||||| ||||||| |||||||||||
Sbjct 1597 TGCTGCGACAAGGACCTCAACTAGTGCTCCTGCGTGCATAACATCTCCGGTTAAGAGTAG 1656
Query 1591 ATTGAAGATAACAAGAAAGCCATCAGAATCCACGTCAATATCGCCAGTATTTATGTCACC 1650
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 1657 ATTGAAGATAACAAGAAAGCCATCAGAATCCACGTCAATATCACCAGTATTTATGTCATC 1716
Query 1651 ACTTGGAAATAGCACTCGAAATATAACAAGAAAGGCATTACGTCAAGCTTTGGTTGGGAA 1710
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1717 ACTTGGAAATAGCACTCGAAAGATAACAAGAAAGGCTTTACGTCAAGCTTTGGTTGGGAA 1776
Query 1711 GGCTTATCTCAGTGCTTCTACAAATATATCTTCACAAAATAAGTGCAGACCTAAATTTAA 1770
||||||||||||||||||||||||| ||||||||||||| |||||| || | ||||||||
Sbjct 1777 GGCTTATCTCAGTGCTTCTACAAATGTATCTTCACAAAAGAAGTGCCGATCAAAATTTAA 1836
Query 1771 GAAGATGTTGACCCAACATTCTGTGACCCCCAAGGCTTTGAAAAGTGTGTCCCTTTCTGT 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1837 GAAGATGTTGACCCAACATTCTGTGACCCCCAAGGCTTTGAAAAGTGTGTCCCTTTCCGT 1896
Query 1831 TTCTTCGAAAAAGAGGAGTTATAGATTAACAAGAAAGGATCAAGGATTGCATAAGTTAGT 1890
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1897 TTCTTCGAAAAAGAGGAGTTATAGATTAGCAAGAAAGGATCAAGGATTGCACAAGTTAGT 1956
Query 1891 GTTTGAGAGAGGGGGATTACCAGAGGGAACTGAACTAGGATACTATGCTCGTGGACAGAA 1950
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1957 GTTTGATAGAGGGGGATTACCAGAGGGAACTGAACTAGGCTACTATGCTCGTGGACAGAA 2016
Query 1951 ATTGCTCGGAGGCTACAAAATGGGCGCTGGAATATATTGTTACTGTTGCAAGT-CTGAGG 2009
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 2017 ATTGCTCGGAGGCTACAAAATGGGCGCTGGAATATATTGTTACTGTTGCAAGTGC-GAGG 2075
Query 2010 TGAGCCCCTCTCTGTTCGAAGCTCATGCAGGCTGGGCATCTCGTAGAAAACCTTATTTTT 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2076 TGAGCCCCTCTCTGTTCGAAGCTCATGCAGGCTGGGCATCTCGTAGAAAACCTTATTTTT 2135
Query 2070 ACATATATACATCTAATGGTGTATCTCTTCACGAATGGGCAACTACTTTCTCACAAGGTC 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2136 ACATATATACATCTAATGGTGTATCTCTTCACGAATGGGCAACTACTTTCTCACATGGTC 2195
Query 2130 GGAAATATTCTGCTAATGATAATAACGACTTGTGTGTTATTTGTGCTGATGGTGGAAATC 2189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2196 GGAAATATTCTGCTAATGATAATAACGACTTGTGTGTTATTTGTGCTGATGGTGGAAATC 2255
Query 2190 TTTTGCTCTGCGATAGCTGCCCAAGAGCTTTCCACATAGAATGTGTTTCCCTTCCGAGTA 2249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2256 TTTTGCTCTGCGATAGCTGCCCAAGAGCTTTCCACATAGAATGTGTTTCCCTTCCGAGTA 2315
Query 2250 TACCTCGTGGTAACTGGCATTGCAAATACTGCGAGAATAAGTTCACGAGCGAAATTACTG 2309
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2316 TACCTCGTGGTAACTGGCATTGCAAATACTGCGAGAATAAGTTCACGAGCGAAATTGCTG 2375
Query 2310 GAGAGTACAATGTCAATTCTTCTGCAGTTGGGCAACTAGAAGGAGTTGATTCTGTTGATC 2369
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2376 GAGAGTACAATGTCAATTCTTCTGCAGTTGGGCAACTAGAAGGAGTTGATCCTGTTGATC 2435
Query 2370 AATTAGCTGGACGATGCATTCGCGTTGTCAAGAACATGGAAGCTGAAACAAATGGGTGTG 2429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2436 AATTAGCTGGACGATGCATTCGCGTTGTCAAGAACATGGAAGCTGAAACAAATGGGTGTG 2495
Query 2430 TATTATGCAGTGGTTCTGATTTTTGTAGATCAGGATTTGGGCCACGGACAATCATAATAT 2489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2496 TATTATGCAGTGGTTCTGATTTTTGTAGATCAGGATTTGGGCCACGGACAATCATAATAT 2555
Query 2490 GTGATCAGTGTGAAAAGGAGTACCACATTGGATGTTTGAGTAGTCAGAATATTGTGGATC 2549
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2556 GTGATCAGTGTGAAAAGGAGTACCACATTGGATGTTTGAGTAGTCAGAATATTGTGGATT 2615
Query 2550 TGAAGGAATTACCTAAAGGAAACTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCCA 2609
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2616 TAAAGGAATTACCTAAAGGAAACTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCCA 2675
Query 2610 CATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTTTGGGAATAA 2669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2676 CATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTTTGGGAATAA 2735
Query 2670 TACAGACGAAGAAAGAAAGAAATGATGTATATTCCATCAGTGATCTTGACATCAGATGGA 2729
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2736 TACAGACGAAGCAAGAGAGAAATGATGTATATTCCATCAGTGATCTTGACATCAGATGGA 2795
Query 2730 GACTGATCAGCGGCAAAGTTACTTCTCCTGAAAGCCGAATGTTACTCTCTCAGGCATTGG 2789
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2796 GACTGATCAGCGGCAAAGTTACTTCTCCTGAAAGCCGAATGTTACTGTCTCAGGCATTGG 2855
Query 2790 CTATTTTTCATGATTGCTTTGATCCTATAGTTGATCCACTTTCTGGGCGCAATCTTATTC 2849
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 2856 CTATTTTTCATGATTGCTTCGATCCTATAGTTGATCCACTTTCTGGGAGCAATCTTATTC 2915
Query 2850 CGAGAATGGTTTACGGGAAGACTATGCAAGGACAAGACTACGGGGGAATCTGCTGTGCTG 2909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2916 CGAGAATGGTTTACGGGAAGACTATGCAAGGACAAGACTACGGGGGAATCTGCTGTGCTG 2975
Query 2910 TTTTGACTGTTAATGCGACTGTTGTTTCTGCTGGACTACTGCGAGTATTTGGCCGAGAGG 2969
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 2976 TTTTGACTGTTAATGCGACTGTTGTTTCTGCTGGACTATTACGAGTATTTGGCCGAGAGG 3035
Query 2970 TTGCAGAACTTCCATTAGTTGCAACACGCATGTGCAGCCGAGAAAAGGGCTACTTTCAAT 3029
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3036 TTGCAGAACTTCCATTAGTTGCAACACGCATGTGCAGCCGAGAGAAGGGCTACTTTCAAT 3095
Query 3030 TGCTCTTTTCCTGCATTGAGAAGCTACTCTCATCCCTGAATGTTGAAAGCATCGTGGTTC 3089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3096 TGCTCTTTTCCTGCATTGAGAAGCTACTCTCATCCCTGAATGTTGAAAGCATCGTGGTTC 3155
Query 3090 CAGCAGCTGAAGAGGCAGAGCCCTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCAC 3149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3156 CAGCAGCTGAAGAGGCAGAGCCCTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCAC 3215
Query 3150 CTGAACAGCTCAGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCAT 3209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3216 CTGAACAGCTCAGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCAT 3275
Query 3210 CCATGCTGCAGAAACCAGT-GCATGCACACCAAATCATTGACAAGAAAATCGAAACCAGT 3268
||||||||||||||||||| | || ||||||||||||||||||||| |||||||||| ||
Sbjct 3276 CCATGCTGCAGAAACCAGTCG-ATTCACACCAAATCATTGACAAGACAATCGAAACCGGT 3334
Query 3269 GTATCTTTAGAAGAAAGTTCTGATATGAAACAAGCCAATGAGTTGTATGTGCATCCTTTG 3328
| |||||||||||||| || |||| ||||||||||||||||||||||||| |||||||||
Sbjct 3335 GCATCTTTAGAAGAAAATTTTGATTTGAAACAAGCCAATGAGTTGTATGTTCATCCTTTG 3394
Query 3329 TGTTGAGGTAAAGCAAGTCACGGATTTGGTGAAAGATGGATTAAAGAGTGAAGTGTTTAG 3388
|||||||| ||||||||||| |||||| |||||||||||||||||| |||||| ||||||
Sbjct 3395 TGTTGAGGCAAAGCAAGTCATGGATTTAGTGAAAGATGGATTAAAGGGTGAAGCGTTTAG 3454
Query 3389 GTTTTAAATGACTTCTTACAACAGAGAGACTTGTGTAAATTTTTGTAGATGCGAAGCTCT 3448
|||||||| | ||||||||||| | | || ||||||||||||||||||||||||||||
Sbjct 3455 GTTTTAAACAAGTTCTTACAACATATA--CTAGTGTAAATTTTTGTAGATGCGAAGCTCT 3512
Query 3449 TTTTTGTTA 3457
|||||||||
Sbjct 3513 TTTTTGTTA 3521
Score = 248 bits (134), Expect = 3e-64
Identities = 213/249 (86%), Gaps = 14/249 (6%)
Strand=Plus/Plus
Query 1 CCAGTGGCTGCAAAATCCTAAATCCCAACCCAAAAGGATTTTG---T-TT-CA---TCTT 52
|||||||||||||||||||||||| | ||| |||||||||||| | || || ||||
Sbjct 15 CCAGTGGCTGCAAAATCCTAAATCTC-ACCGAAAAGGATTTTGTATTGTTACATCCTCTT 73
Query 53 CTTCTTCCTCCAGATCCATGTATGAAACCTCCCCTGAACCCTAATTTAGCTATCGAATTT 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 74 CTTCTTCCTCCAGATCCATGTATGAAACCTCCCCTGAACCCTAATTTAGCTATCGAATTT 133
Query 113 GAGATTCGATCCGATGCTCACTTCTAAATCCTCGATTCGTCTCTGAATAACA-ACC-CCA 170
|||||||||||||||| | ||||| ||||| ||| ||||||||||| ||| | | | |||
Sbjct 134 GAGATTCGATCCGATGTTTACTTCCAAATCTTCGTTTCGTCTCTGA-TAATATAACTCCA 192
Query 171 TCGTAATCGT-CTAATACTCTTCAATGTTCGTTTCGTTTTTCTCTATGCCAGATTTGAAA 229
||||||| | || || || | |||||||||||||| |||||| ||||||| | ||
Sbjct 193 TCGTAATAGAACTGATT-TCAAGACGGTTCGTTTCGTTTTCCTCTATCCCAGATTCGGAA 251
Query 230 AGCTACCTT 238
|||||||||
Sbjct 252 AGCTACCTT 260
> AT4G01590.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: Arabidopsis protein of unknown function
(DUF241) (TAIR:AT4G35680.1); Has 1908 Blast hits to 1345
proteins in 175 species: Archae - 3; Bacteria - 106; Metazoa
- 494; Fungi - 346; Plants - 115; Viruses - 71; Other Eukaryotes
- 773 (source: NCBI BLink). | chr4:688881-690415 REVERSE
LENGTH=1022
Length=1022
Score = 126 bits (68), Expect = 1e-27
Identities = 145/179 (81%), Gaps = 18/179 (10%)
Strand=Plus/Plus
Query 50 CTTCTTCTTCCTCCAGATCCATGTATGAAACCTCCCCTGAACCCTAATTTAGCTATCGAA 109
|||||| |||| |||||||||||||||||| ||||||||||||||||||||| | |
Sbjct 10 CTTCTTGGTCCTGCAGATCCATGTATGAAACTTCCCCTGAACCCTAATTTAGC--T---A 64
Query 110 TTTGAGATTCGATCCGATGCTCACTTCTAAATCCTCGATTCGTCTCTGAATAACAACCCC 169
|| || ||| | ||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 65 TTCGA-ATT---T-CGATGTTCACTTCTAAATCCTCGATTCGTCTCTGAATAACT-CC-- 116
Query 170 ATCGTAATCGT-CTAATACTCTTCAATGTTCGTTTCGTTTTTC-TCT-ATGCCAGATTT 225
|||||||||| || || || | ||||||||| |||||| ||| || ||||||||
Sbjct 117 ATCGTAATCGAACTGATT-TCAAGACGGTTCGTTTC-TTTTTCCTCTTATCCCAGATTT 173
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 174530794697
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5