BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482713 Length=1006 Score E Sequences producing significant alignments: (Bits) Value AT2G37210.2 | Symbols: | lysine decarboxylase family protein |... 872 0.0 AT3G53450.1 | Symbols: | Putative lysine decarboxylase family ... 793 0.0 AT2G35990.1 | Symbols: | Putative lysine decarboxylase family ... 204 2e-51 > AT2G37210.2 | Symbols: | lysine decarboxylase family protein | chr2:15623991-15626938 REVERSE LENGTH=1086 Length=1086 Score = 872 bits (472), Expect = 0.0 Identities = 533/562 (95%), Gaps = 6/562 (1%) Strand=Plus/Plus Query 447 GTGGTTATGGAACACTTGAAGAATTGCTTGAAGTCATAACTTGGGCTCAGCTTGGTATAC 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 529 GTGGTTATGGAACACTTGAAGAATTGCTTGAAGTCATAACTTGGGCTCAGCTTGGTATAC 588 Query 507 ATGACAAGCCGGTGGGTTTGCTCAATGTTGATGGATACTACAACTCTCTGCTCTCATTCA 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 589 ATGACAAGCCGGTGGGTTTGCTCAATGTTGATGGATACTACAACTCTCTGCTCTCATTCA 648 Query 567 TTGACAAAGCTGTCGAAGAAGGATTCATCAGCCCGAATGCTCGTGAGATCATCGTCTCTT 626 |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||||| Sbjct 649 TTGACAAAGCAGTCGAAGAAGGATTTATTAGCCCGACTGCTCGTGAGATCATCGTCTCCG 708 Query 627 CACCTACTGCTAAAGAGCTGGTGAAAAAGCTAGAGGAATATGCACCTTGCCATGAAAGTG 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 709 CACCTACTGCTAAAGAGCTGGTGAAAAAGCTAGAGGAATATGCACCTTGCCATGAAAGGG 768 Query 687 TTGCAACTAAGCTTTGTTGGGAGATGGAACGGATTGGTTACTCGTCTGAAGAGTGATTAA 746 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 769 TTGCAACGAAGCTTTGTTGGGAGATGGAACGGATTGGTTACTCCTCTGAAGAGTGATTCA 828 Query 747 GATCAAGATTATCAATATAACTATTTAAAATATTTTATAATATAGATTTGAAACTTTCGA 806 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 829 GATCAAGATTATCTATATAACTATTTAAAATATTTTATAATATAGATTTGAAACTTTCGG 888 Query 807 AGATTTCATGATTTTAATCTTACTAAAAAAGGAAGGAATAGATTTTGATTAGTTGGGTAA 866 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 889 AGATTTCATGATTT-AATCTTACTAAAAAAGGAAGGGATAGATTTTGATTAGTTGGGTAA 947 Query 867 AATTTCCACTACGGAGGAAATTCTTTTTATGTAAATTATTAGTAATGTCTTTTTAACTCG 926 |||||||||| ||||||| ||| ||| |||||||||||||||||||||||||||| ||| Sbjct 948 AATTTCCACTTCGGAGGAGATT-TTTA-ATGTAAATTATTAGTAATGTCTTTTTAAGTCG 1005 Query 927 AAGCTAAATGTTTTTAGTTGATGTAAGTGTCGCAACTCTCT-CTATC-TACTATTGTAAC 984 ||||||||||||||||||| |||||| |||||||||||||| |||| || ||||||| Sbjct 1006 AAGCTAAATGTTTTTAGTTTATGTAATTGTCGCAACTCTCTACTATTGTAAG-TTGTAAC 1064 Query 985 CAAGACAAGTTTCACACCTTCG 1006 ||||||||||||||||| |||| Sbjct 1065 CAAGACAAGTTTCACACTTTCG 1086 Score = 745 bits (403), Expect = 0.0 Identities = 432/446 (97%), Gaps = 1/446 (0%) Strand=Plus/Plus Query 1 ACTCGTAAAACAGTTTTAAGAAATTAGATTCTTGTGCTCAAAGAAACCTTAAACTGTTTA 60 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 12 ACTCGTAAAACTGTCTTAAGAAATTAGATTCTTGTGCTCAAAGAAACCTTAAACTGCTTA 71 Query 61 CCTTTTTCTCTTTCCAACCAAAGTTTAGAATCAAATGGAGATCAAAGGTGAAACGATGCA 120 || |||||||||||| ||||| |||||||||| ||||| |||||||||||| ||||||| Sbjct 72 CC-TTTTCTCTTTCCGCCCAAAATTTAGAATCACATGGAAATCAAAGGTGAATCGATGCA 130 Query 121 AAAGTCAAAGTTCAGAAGAATCTGTGTCTTCTGTGGAGGCAGTCAAGGCAAGAAGAGTAG 180 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || Sbjct 131 AAAGTCAAAGTTCAGAAGAATCTGTGTCTTCTGTGGAAGCAGCCAAGGCAAGAAGAGCAG 190 Query 181 TTACCAAGATGCTGCTGTTGATCTCGGCAACGAACTGGTTTCAAGGAATATTGATCTAGT 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 191 TTACCAAGATGCTGCTGTTGACCTCGGCAACGAACTGGTTTCAAGGAATATTGATCTAGT 250 Query 241 CTATGGAGGTGGGAGCATAGGATTGATGGGTTTGGTTTCACAAGCTGTTCATGATGGTGG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 251 CTATGGAGGTGGGAGCATAGGATTGATGGGTTTGGTTTCACAAGCTGTTCATGATGGTGG 310 Query 301 TCGTCATGTTATTGGAATCATTCCCAAGACCCTCATGCCTAGAGAGTTGACTGGTGAAAC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 311 TCGTCATGTTATTGGAATCATTCCCAAGACCCTCATGCCTAGAGAGTTGACTGGTGAAAC 370 Query 361 AGTAGGAGAAGTAAGAGCAGTTGCAGATATGCACCAAAGGAAAGCTGAGATGGCTAAGCA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 371 AGTAGGAGAAGTAAGAGCAGTTGCAGATATGCACCAAAGGAAAGCTGAGATGGCTAAGCA 430 Query 421 CTCTGATGCTTTTATTGCCTTACCAG 446 |||||||||||||||||||||||||| Sbjct 431 CTCTGATGCTTTTATTGCCTTACCAG 456 > AT3G53450.1 | Symbols: | Putative lysine decarboxylase family protein | chr3:19812977-19815430 REVERSE LENGTH=648 Length=648 Score = 793 bits (429), Expect = 0.0 Identities = 580/653 (89%), Gaps = 10/653 (2%) Strand=Plus/Plus Query 95 ATGGAGATCAA-AGGTGAAACGATGCAAAAGTCAAAGTTCAGAAGAATCTGTGTCTTCTG 153 |||||| |||| | |||||| ||||||||||||||||| ||||||||||||| || || Sbjct 1 ATGGAGGTCAACA-ATGAAACCATGCAAAAGTCAAAGTTTGGAAGAATCTGTGTGTTTTG 59 Query 154 TGGAGGCAGTCAAGGCAAGAAGAGTAGTTACCAAGATGCTGCTGTTGATCTCGGCAACGA 213 |||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 60 TGGAAGCAGCCAAGGCAAGAAGAGTAGTTACCAAGATGCTGCTGTGGATCTAGGCAACGA 119 Query 214 ACTGGTTTCAAGGAATATTGATCTAGTCTATGGAGGTGGGAGCATAGGATTGATGGGTTT 273 | |||||| |||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 120 ATTGGTTTTAAGGAACATTGATCTAGTCTATGGAGGTGGAAGCATAGGTTTGATGGGTTT 179 Query 274 GGTTTCACAAGCTGTTCATGATGGTGGTCGTCATGTTATTGGAATCATTCCCAAGACCCT 333 |||||| ||||||||||||||||||||||| |||||||||||| | ||||||||||| || Sbjct 180 GGTTTCGCAAGCTGTTCATGATGGTGGTCGCCATGTTATTGGAGTTATTCCCAAGACACT 239 Query 334 CATGCCTAGAGAGTTGACTGGTGAAACAGTAGGAGAAGTAAGAGCAGTTGCAGATATGCA 393 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CATGCCTAGAGAGTTGACCGGTGAAACAGTAGGAGAAGTAAGAGCAGTTGCAGATATGCA 299 Query 394 CCAAAGGAAAGCTGAGATGGCTA-AGCACTCTGATGCTTTTATTGCCTTACCAGGTGGTT 452 ||||| ||||| |||||||||| | |||||||||||||||||||| ||||||||||| | Sbjct 300 TCAAAGAAAAGCAGAGATGGCTAGA-CACTCTGATGCTTTTATTGCTTTACCAGGTGGAT 358 Query 453 ATGGAACACTTGAAGAA-TTGCTTGAAG-TCATAACTTGGGCTCAGCTTGGTATACATGA 510 |||||||||||||||| || ||| || ||||||| |||||||||||||| |||||||| Sbjct 359 ATGGAACACTTGAAGAGCTT--TTGGAGGTCATAACATGGGCTCAGCTTGGAATACATGA 416 Query 511 CAAGCCGGTGGGTTTGCTCAATGTTGATGGATACTACAACTCTCTGCTCTCATTCATTGA 570 || ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct 417 TAAACCGGTGGGTTTGCTCAATGTTGATGGATACTACAACTCTTTGCTCTCTTTCATTGA 476 Query 571 CAAAGCTGTCGAAGAAGGATTCATCAGCCCGAATGCTCGTGAGATCATCGTCTCTTCACC 630 ||||| || |||||||| |||||||| | || || || ||||||| | ||| |||| Sbjct 477 TAAAGCCGTTGAAGAAGGCTTCATCAGTACAAACGCACGCCAGATCATAATTTCTGCACC 536 Query 631 TACTGCTAAAGAGCTGGTGAAA-AAGCTAGAGGAATATGCACCTTGCCATGAAAGTGTTG 689 |||||| || ||||| || ||| ||||| ||||||||| | ||||||||||||||||||| Sbjct 537 TACTGCCAAGGAGCTTGT-AAAGAAGCTGGAGGAATATTCGCCTTGCCATGAAAGTGTTG 595 Query 690 CAACTAAGCTTTGTTGGGAGATGGAACGGATTGGTTACTCGTCTGAAGAGTGA 742 | |||||||||||||||||||| || ||||||| ||||| |||||||| ||| Sbjct 596 CGACTAAGCTTTGTTGGGAGATAGAGCGGATTGACTACTCTTCTGAAGACTGA 648 > AT2G35990.1 | Symbols: | Putative lysine decarboxylase family protein | chr2:15113955-15116776 FORWARD LENGTH=886 Length=886 Score = 204 bits (110), Expect = 2e-51 Identities = 334/440 (76%), Gaps = 23/440 (5%) Strand=Plus/Plus Query 119 CAAAAGTCAAAG-TTCAGAAGAATCTGTGTCTTCTGTGGAGGCAG-TCAAGGCAAGAAGA 176 ||||| || ||| ||||| || |||||||||||||| ||| |||| || ||||| || | Sbjct 126 CAAAA-TC-AAGATTCAGGAGGATCTGTGTCTTCTGCGGAAGCAGTTC-CGGCAACAAAA 182 Query 177 GTAGTTACCAAGATGCTGCTGTTGATCTCGGCAACGAACTGGTTTCA-AGGAATATTGAT 235 | ||| || || |||||| | | |||| | || |||||| | | || || || ||| Sbjct 183 CCACTTATCACGACGCTGCTCTCCAACTCGCCCACCAACTGG-TGGAGAGAAACATCGAT 241 Query 236 CTAGTCTATGGAGGTGGGAGCATAGGATTGATGGGTTTGGTTTCACAAGCTGTTCATGAT 295 | || |||||||| || ||| | || | |||||| | |||| ||||||||||||||| Sbjct 242 TTGGTGTATGGAGGAGGAAGCGTGGGGCTAATGGGTCTCATTTCTCAAGCTGTTCATGAT 301 Query 296 GGTGGTCGTCATGTTATTGGAATCATTCCCAAGACCCTCATGC-CTA-GAGAGTTGACTG 353 ||||||||||||||| |||| |||||||| ||| | || | || | | ||||| | || | Sbjct 302 GGTGGTCGTCATGTTCTTGGGATCATTCCGAAGTCTCT-A-GCACCAAGAGAGATAACCG 359 Query 354 GTGAAACAGTAGGAGAAGTAAGAGCAGT-TGCAGA-TATGCACCAAAGGAAAGCTGAGAT 411 ||||| || |||||||||| | | |||| | | || ||||||||||||||| ||||| || Sbjct 360 GTGAATCAATAGGAGAAGTTATAACAGTAT-C-GACTATGCACCAAAGGAAGGCTGAAAT 417 Query 412 GGCTAAGC-ACTCTGATGCTTTTATTGC-CTTACCAGGTGGTTATGGAACACTTGAAGAA 469 || | || | | ||||| || || || ||| || ||||| ||||| ||| ||||||| Sbjct 418 GGGTC-GCCAAGCGGATGCCTTCATCGCACTT-CCTGGTGGATATGGGACATTTGAAGAG 475 Query 470 TTGCTTG-AAGTCATAACTTGGGCTCAGCTTGGTATACATGAC-AAGCCGGTGGGTTTGC 527 ||| ||| ||||||| || ||| |||||||||| || || || || |||||||| | Sbjct 476 TTG-TTGGAAGTCATCACCTGGTCTCAGCTTGGGATTCAC-ACTAAACCGGTGGGACTAT 533 Query 528 TCAATGTTGATGGATACTAC 547 | || || ||||||| |||| Sbjct 534 TGAACGTGGATGGATTCTAC 553 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49279698207 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5