BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482724 Length=1556 Score E Sequences producing significant alignments: (Bits) Value AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 2314 0.0 > AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:15667208-15668851 FORWARD LENGTH=1644 Length=1644 Score = 2314 bits (1253), Expect = 0.0 Identities = 1467/1570 (93%), Gaps = 16/1570 (1%) Strand=Plus/Plus Query 1 TTTTGAGTTTCATGTCTTGTCTGAGTAATTATTATTGTCGAGCTGTCAGG-TATATTCAA 59 |||| |||||||||||||||||||| |||||||||||||||||| || || |||| || Sbjct 5 TTTTTAGTTTCATGTCTTGTCTGAGAAATTATTATTGTCGAGCTTTC-GGTTATAAACAG 63 Query 60 TCTCGGTCTTGCTACAGTCGATCACTGAATCGTGATATAGCTAACGAATCATCTGACGTT 119 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct 64 TCTCGATCTTGCTACAGTCGATCACTGAATCGTGAAATAGCTAACGAGTCATCTGAAGTT 123 Query 120 GAGAGACGAGCTCGTTCTCTGAGAGTTTTAGATATCATATCTTCGAAATCTGGTGGAGTT 179 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 124 GAGAGACGAGCTCGTTCTCTGAGAGTTTTGGATATCATATCTTCGAAATCTGGTGGAGTT 183 Query 180 TCGAATCGACAGAATCATTTTGGTTTCGTTCAGGAATTTCTACAAACAGATTCGAGGCAA 239 |||||||| ||| | ||||||||||||||||||||||||| ||||||||||||| ||| | Sbjct 184 TCGAATCGTCAGGACCATTTTGGTTTCGTTCAGGAATTTCGACAAACAGATTCGTGGCGA 243 Query 240 TTCAGAGGTCAAGCAATTTCCGAGGATTTTGATCTCTCAAGAACCAAAAATGGAGTTTCA 299 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 244 TTCAGAGGTCAGGCAATTTCCGAGGATTTTGATCTCTCAAGAACCAAAAATGGAGTTTCA 303 Query 300 AGCGTGCTCGAAGAAGTTATGCTGGAGGATTCTTCAAGCTCTGTCAAGCGAGATGGATGG 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 304 AGCGTGCTCGAAGAAGTTATGCTGGAGGATTCTTCAAGCTCTGTCAAGCGAGATGGATGG 363 Query 360 AGTTTCGATGCTTATGGTTTATCATCCGCCGTGAGATCCTGTGGGTCGAATCGAGACTTT 419 |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct 364 AGTTTCGATGCTTATGGTTTATCATCCGCCGTGAGATCTTGTGGGTTGAATCGAGACTTT 423 Query 420 AGAACCGGTTCGGGGTTTCATTGCTTAGCATTGAAAGGTGGGTTTATCTCAGATGTCTAC 479 ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 424 AGAACCGGTTCTGGGTTTCATTGTTTAGCGTTGAAAGGTGGGTTTATCTCAGATGTCTAC 483 Query 480 TTAGGAAGTTCCCTGGTCGTTTTGTACCGAGATTCTGGTGAAGTAGAGAATGCACATAAA 539 ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 484 TTAGGAAGTTCTCTGGTCGTTTTGTACAGAGATTCTGGTGAAGTAGAGAATGCATATAAA 543 Query 540 GTGTTTGCTGAAATGCCTGACAAGAACGTGGTTTCATGGACGGCTATGATTTCAGGGTTT 599 ||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct 544 GTGTTTGAAGAAATGCCTGAGAGGAATGTGGTTTCATGGACGGCTATGATTTCAGGGTTT 603 Query 600 GCGCAAGAATGGCGAGTTGATATCTGCATGAAGCTGTATTCAGAGATGAGAAATTCAACC 659 ||||||||||||||||||||||||||| ||||||| |||||| |||||||||| |||||| Sbjct 604 GCGCAAGAATGGCGAGTTGATATCTGCTTGAAGCTTTATTCAAAGATGAGAAAGTCAACC 663 Query 660 TCTGATCCGAATGATTATACTTTCACGGCTCTCTTGAGCGCTTGCACGGGAAGCGGAGCC 719 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 664 TCTGATCCGAATGATTACACATTCACGGCTCTCTTGAGCGCTTGCACGGGAAGCGGAGCC 723 Query 720 CTAGGGCAAGGAAGAAGCGTTCATTGTCAGACACTCCAAATGGGATTGAAGTCGTATCTT 779 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 724 CTAGGGCAAGGAAGAAGTGTTCATTGTCAGACACTCCACATGGGATTGAAGTCGTATCTA 783 Query 780 CATATCTCAAACTCTCTCATCTCGATGTACTGCAAATGTGGCGATTTGAAGGATGCTTTT 839 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 784 CATATCTCAAACTCTCTCATCTCGATGTACTGCAAATGCGGTGATTTGAAGGATGCTTTT 843 Query 840 CGTATCTTTGACCAGTTTTCAAACAAAGACGTTGTTTCCTGGAACTCTATGATTGCTGGT 899 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 844 CGTATCTTTGACCAGTTTTCAAACAAAGACGTTGTTTCTTGGAACTCTATGATTGCTGGT 903 Query 900 TACGCGCAGTACGGCCTTGCAACGCAAGCAATCGAGCTCTTTGAATTAATGATGCCCAAA 959 ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 904 TACGCGCAGCACGGCCTTGCAATGCAAGCAATCGAGCTCTTTGAATTAATGATGCCTAAA 963 Query 960 AGCGGAATAAAGCCGGATGCAATCACATATCTAGGACTTCTGTCATCGTGCAGACACGCA 1019 ||||||| |||||| ||||||||||||||||||||| || |||||||||| ||||||||| Sbjct 964 AGCGGAACAAAGCCAGATGCAATCACATATCTAGGAGTTTTGTCATCGTGTAGACACGCA 1023 Query 1020 GGTCTTGTAATAGAAGGAAGAAAGTTCTTCAACTTGATGGCAGAACGCGGCCTGAAACCA 1079 |||||||||| ||||||||||||||||||||| |||||||| |||| ||||||||||||| Sbjct 1024 GGTCTTGTAAAAGAAGGAAGAAAGTTCTTCAATTTGATGGCGGAACACGGCCTGAAACCA 1083 Query 1080 GAACTCAACCACTACTCTTGTCTGGTCGATCTTCTTGGCAGATTTGGTCTGTTGCAAGAA 1139 ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct 1084 GAACTCAACCATTACTCTTGTCTAGTCGATCTTCTCGGGAGATTTGGTCTGTTGCAAGAA 1143 Query 1140 GCCCTGGAACTGATAGAGAACATGCCAATGAAACCAAACTCAGTCATATGGGGATCCCTG 1199 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1144 GCCCTGGAACTGATCGAGAACATGCCAATGAAACCAAACTCAGTCATATGGGGATCTCTG 1203 Query 1200 CTTTTTTCTTGCCGTGTGCACGGCGATGTCTGGATGGGAATCAGAGCTGCAGAGGAACGG 1259 || || ||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 1204 CTATTCTCTTGCCGTGTTCACGGCGATGTCTGGACCGGAATCAGAGCTGCAGAGGAACGA 1263 Query 1260 TTGATTCTTGAACCTGAATGTGCAGCCACACATGTCCAGCTGGCGAATCTTTACGCCAGT 1319 | || ||||||||||| || |||||||| |||||||||||||| ||||||||||||||| Sbjct 1264 CTAATGCTTGAACCTGATTGCGCAGCCACGCATGTCCAGCTGGCAAATCTTTACGCCAGT 1323 Query 1320 GTCGGCTACTGGAAAGAGGCGGCGATAGTGAGGAAACTGATGAAAGATAAAGGACTGAGG 1379 || || ||||||||||| ||||||| ||||||||| |||||||||||||||||||||| | Sbjct 1324 GTAGGGTACTGGAAAGAAGCGGCGACAGTGAGGAAGCTGATGAAAGATAAAGGACTGAAG 1383 Query 1380 ACGAATCCAGGTTGTAGTTGGATCGAGATCAATAA-TAATATTTTTATGTTTAAAGCTGA 1438 |||||||| ||||| |||||||||||||||||||| || | |||| |||||||||||||| Sbjct 1384 ACGAATCCGGGTTGCAGTTGGATCGAGATCAATAACTA-TGTTTTCATGTTTAAAGCTGA 1442 Query 1439 AGATGGTAGCAACTGTAGAATGCTAGAGATTGTTCATGTTCTTCATTGTCTAATTGATCA 1498 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1443 AGATGGTAGCAACTGTAGAATGCTAGAGATTGTTCATGTTCTTCATTGTCTCATTGATCA 1502 Query 1499 CATGGAGTTCCTCTAATAT-C----T-C------ATTAGTTTTATAGTGTATACCAGATC 1546 ||||||||||||||||||| | | | ||||||||||||||| |||||||||| Sbjct 1503 CATGGAGTTCCTCTAATATTCAGGGTTCTCTCTCATTAGTTTTATAGTGCATACCAGATC 1562 Query 1547 CATATCTTTT 1556 || ||||||| Sbjct 1563 CAGATCTTTT 1572 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76806833850 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5