BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482729
Length=2366
Score E
Sequences producing significant alignments: (Bits) Value
AT2G37360.1 | Symbols: | ABC-2 type transporter family protein... 2687 0.0
AT2G37362.1 | Symbols: | Potential natural antisense gene, loc... 2460 0.0
AT3G53510.1 | Symbols: | ABC-2 type transporter family protein... 1624 0.0
> AT2G37360.1 | Symbols: | ABC-2 type transporter family protein
| chr2:15673442-15675920 REVERSE LENGTH=2479
Length=2479
Score = 2687 bits (1455), Expect = 0.0
Identities = 1718/1841 (93%), Gaps = 34/1841 (2%)
Strand=Plus/Plus
Query 542 AACCGGATCGCCAAAGACAGCCTCAGGGGATCCATTACCTTAAACGGAGAAGTTCTTGAA 601
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 594 AACCGGATCGCAAAAGATAGCCTCAGGGGATCCATTACCTTAAACGGAGAAGTTCTTGAA 653
Query 602 TCCAGAC-TGCAGAAAGTCATATCGGCTTACGTGATGCAAGACGACCTTCTCTTCCCGAT 660
|| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 654 TCAAG-CATGCAGAAAGTCATATCGGCTTACGTGATGCAAGACGACCTTCTCTTCCCGAT 712
Query 661 GCTTACCGTGGAGGAAACTCTAATGTTCTCTGCAGAGTTCAGGCTCCCTCGTTCACTCTC 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 713 GCTTACCGTGGAGGAAACTCTAATGTTCTCTGCAGAGTTCAGGCTCCCTCGTTCACTCTC 772
Query 721 CAAGAAGAAGAAGAAAGCACGGGTTCAAGCTCTGATTGACCAATTGGGCCTAAGGAGCGC 780
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 773 CAAGAAGAAGAAGAAAGCAAGGGTTCAAGCTCTGATTGACCAATTAGGCCTAAGGAGCGC 832
Query 781 TGCAAAAACCGTGATTGGTGATGAAGGCCACAGAGGCGTGTCTGGAGGAGAAAGGAGACG 840
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 833 TGCAAAAACCGTGATTGGTGATGAAGGCCACAGAGGAGTGTCTGGAGGAGAAAGGAGACG 892
Query 841 GGTTTCAATTGGAAACGACATAATCCATGACCCAATTATCCTCTTTCTCGATGAGCCAAC 900
||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 893 GGTATCAATTGGAAACGACATAATCCATGACCCAATCATCCTCTTTCTAGATGAGCCAAC 952
Query 901 CTCAGGGCTTGACTCTACGAGCGCCTACATGGTTATCAAAGTGCTTCAGAGAATCGCACA 960
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 953 CTCAGGGCTCGACTCTACAAGCGCCTACATGGTTATCAAAGTCCTTCAGAGAATCGCACA 1012
Query 961 GAGTGGCAGCATAGTTATCATGTCCATCCATCAGCCAAGTTACAGAATCATGGGT-TTGC 1019
||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || |
Sbjct 1013 AAGTGGCAGCATAGTTATCATGTCAATCCATCAGCCTAGTTACAGAATCATGGGTCTT-C 1071
Query 1020 TAGATCAGTTAATCTTCCTTTCTAGGGGAAACACGGTTTATAGCGGCTCACCAACACATC 1079
|||||||||||||||||||||||| ||||||||| || || |||||||||||||||||||
Sbjct 1072 TAGATCAGTTAATCTTCCTTTCTAAGGGAAACACAGTCTACAGCGGCTCACCAACACATC 1131
Query 1080 TCCCTCAGTTCTTCTCAGAGTTCGAGCACCCGATTCCTGAAAACGAGAACAAAACAGAGT 1139
||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1132 TCCCTCAGTTCTTCTCAGAATTCAAGCACCCAATTCCTGAAAACGAGAACAAAACAGAGT 1191
Query 1140 TCGCTCTCGATCTCATCCGAGAGCTGGAAAATTCTGCAGAAGGAACCAAGTCACTTGTCG 1199
||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct 1192 TCGCTCTCGATCTCATCCGAGAGCTGGAATATTCTACAGAAGGAACCAAGCCACTTGTCG 1251
Query 1200 AGTTCCACAAGAAATGGCGAGCAAAGCAAGCGCAATCACCAAGCTATAGCAATGGTAACA 1259
||||||||||| ||||||||||||||||||| | | | |||||| | ||| |||||
Sbjct 1252 AGTTCCACAAGCAATGGCGAGCAAAGCAAGC--A--C-C-AAGCTACAACAACAATAACA 1305
Query 1260 AGAAAAACAACAACGCATCT-CTC--AAAGAAGCGATAACCGCGAGTATCTCCAGAGGGA 1316
||| ||||| ||||| |||| ||| |||||||||||||||||||||||||| |||||||
Sbjct 1306 AGAGAAACACCAACGTATCTTCTCTCAAAGAAGCGATAACCGCGAGTATCTCAAGAGGGA 1365
Query 1317 AACTCGTCTCTGGAGCAAC-AA-A-CAACTCATCAAACCTAACACCATCATTCCAAACAT 1373
||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 1366 AACTCGTCTCTGGAGCAACGAACAACAACTCATCAAACCTAACACCATCATTCCAAACAT 1425
Query 1374 TCGCCAATCCTTTCTGGATCGAAATGATCGTCATAGGCAAACGCGCTATACTAAACTCAA 1433
||||||||||||||||||| |||||||| || ||||||||||| |||||| |||||||||
Sbjct 1426 TCGCCAATCCTTTCTGGATTGAAATGATAGTAATAGGCAAACGTGCTATATTAAACTCAA 1485
Query 1434 TGA-GACAACCAGAGCTCCTCGGAATGCGACTAGGAGCTGTAATGGTGACCGGAATCATC 1492
|| |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 1486 -GAAGACAACCAGAACTCCTCGGAATGAGACTAGGAGCTGTAATGGTCACCGGAATCATC 1544
Query 1493 CTAGCCACAATGTTCACTAACCTAGACAATTCCCCAAAAGGAGCACAAGAACGTCTAGGA 1552
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1545 CTAGCTACAATGTTCACTAACCTAGACAATTCCCCAAAAGGAGCACAAGAACGTTTAGGA 1604
Query 1553 TTCTTCGCATTCGCAATGTCCACAACATTCTACACATGTGCAGAAGCAATCCCAGTGTTT 1612
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1605 TTCTTCGCATTCGCAATGTCAACAACATTCTACACATGTGCAGAAGCAATCCCAGTCTTT 1664
Query 1613 CTAGAAGAACGTTACATATTCATGAGAGAAACAGCTTACAACGCCTACCGGAGATCCTCC 1672
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1665 CTACAAGAACGTTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCCTCC 1724
Query 1673 TACGTCCTCTCTCAATCCATAATCTCAATCCCTGCCTTAATCTTCCTCTCCGCAAGCTTC 1732
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 1725 TACGTCCTCTCTCAATCCATAATCTCAATCCCGGCCTTAATCGTCCTCTCCGCAAGCTTC 1784
Query 1733 GCCGCCACAACATTCTGGGCCGTTGGTCTCTCCGGAGGCTCCAGTGGTTTCCTCTTCTTC 1792
|||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||
Sbjct 1785 GCCGCCACAACATTCTGGGCCGTTGGTCTCGACGGAGGCGCCAATGGTTTCTTCTTCTTC 1844
Query 1793 TTCCTCACAATCCTCGCCTCATTCTGGGCCGGAAGCTCCTTCGTAACATTCCTCTCCGGC 1852
| | |||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct 1845 TACTTCACAATCCTAGCCTCATTTTGGGCAGGAAGCTCCTTCGTAACGTTCCTCTCCGGC 1904
Query 1853 GTCGTCGCCAA-CGTAATGCTCGGATTCACAATCGTTGTAGCGATCCTCGCTTACTTCCT 1911
|| | |||| ||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 1905 GTTATA-CCAAACGTAATGCTCGGATTCACAGTCGTAGTAGCGATCCTCGCTTACTTCCT 1963
Query 1912 CCTCTTCTCCGGATTCTTCATCTC-CAGAGATCGAATCCCTGTTTACTGGCTCTGGTTCC 1970
|||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||
Sbjct 1964 CCTCTTCTCCGGATTCTTCATCTCTC-GAGATCGAATTCCTGTTTACTGGCTCTGGTTCC 2022
Query 1971 ATTACATCTCCTTAGTGAAATACCCTTACGAAGGAGTGTTGCAGAACGAATT-CGAAGAT 2029
||||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 2023 ATTACATCTCCTTGGTGAAATACCCTTACGAAGGAGTGTTGCAGAACGAATTTCAAA-AT 2081
Query 2030 CCGACGAAATGTTTCGTCAGAGGAGTTCAGATTTTT-GATAATTCGCCGTTGGGGGAGTT 2088
||||||| |||||||| ||||||||||||| || || || ||||||||||||||||||||
Sbjct 2082 CCGACGAGATGTTTCGCCAGAGGAGTTCAG-TTATTCGACAATTCGCCGTTGGGGGAGTT 2140
Query 2089 TCCGAACGACGTGAAATTGAATCTGTTGAAGAGTATGAGCGGTGTTTTGGGGACGAATGT 2148
||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2141 TCCGAACGATGTGAAAGTGAATCTGTTGAAGAGTATGAGCGGTGTATTGGGGACGAATGT 2200
Query 2149 GACGGCGGAGACTTGTGTGACGACGGGGATTGATATATTGAAGCAGCAAGGGATTACGGA 2208
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 2201 GACGGCGGAGACTTGTGTGACGACGGGGATTGATATTTTGAAACAGCAAGGGATTACGGA 2260
Query 2209 TTTTAGTAAATGGAATTGTTTGTGGATTACTGTTGCTTGGGGATTTTTCTTTAGGGTTTT 2268
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2261 TATTAGTAAATGGAATTGTTTGTGGATTACTGTTGCTTGGGGTTTTTTCTTTAGGGTTTT 2320
Query 2269 GTTTTATTTCACTTTGTTGATTGGGAGCAAGAACAAACGGAGGTGATGATTTAAACAAtt 2328
||||||||||||| | |||||||| |||||||||||||||| ||||| | ||||| ||
Sbjct 2321 GTTTTATTTCACTCTCTTGATTGGTAGCAAGAACAAACGGAAGTGAT--T--AAACAGTT 2376
Query 2329 -tt-ttttttttGGTTGTGAAAAATG-TTTGTTGTAATTTT 2366
|| |||||||| || ||||||| | ||||||||||||||
Sbjct 2377 GTTCTTTTTTTTTTTT-TGAAAAAAGGTTTGTTGTAATTTT 2416
Score = 765 bits (414), Expect = 0.0
Identities = 502/544 (92%), Gaps = 8/544 (1%)
Strand=Plus/Plus
Query 1 TCCTATTCATTTCTTCTTTGTGGGTATGAGCTATATAACCCATATAGCCTGAGAAGATTA 60
|||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 20 TCCTATTCGTGTCTTCTTTGTGGGTATGAGCTATATAACCCACATAACCTGAGAAGATTA 79
Query 61 AGACaaaaaaacggaaaaaaTGTCTGGCTTG---GGAAAATTATCTCCGGCCAAACGAGT 117
||||||||| || | ||||||||||||||| ||||||| ||||||||||||||| ||
Sbjct 80 AGACAAAAATACATAGAAAATGTCTGGCTTGCTCGGAAAATCATCTCCGGCCAAACGGGT 139
Query 118 AGACGGCAACAATGATCTTCCTCTGTTTTATGTAAACACGATGTCCGTGGAGCCTCAACG 177
|| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |
Sbjct 140 TGATGGCAACAATGATCTTCCTATGTATTATGTAAACCCGATGTCCGTGGAGCCTCAAGG 199
Query 178 TCGTCCAAGAGACACGCCTAGAGTCTCTGTCACATTCGCCGAGCATCTTATGAATGTGGA 237
|||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 200 ACGTCCAAGCGACACGACTAGAGTCTCTGTCACATTCGCCGAGCATCTTATGAACGTGGA 259
Query 238 GGATGCAAGGAATGATGAAAGTGCAAGTAGCCGGGCTCTAGGAATTGCCTCACCAATCAC 297
||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 260 GGATGCAAGGAATGATGAAAGTGCAAGTAGCCGGGCTCTGGGAATTGCCTCACCTATCAA 319
Query 298 TTCTTCTGCATCCTCTTTCAATTCATGGACCTCTGCTCCTGCTTCTTCTATATCGTCTTC 357
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 320 TTCTGCTGCATCCTCTTTCAATTCATGGGCCTCTGCTCCTGCTTCTTCTATATCTTCTTC 379
Query 358 CCCGTTCGTTCTTTCATTCAAC-GACTTGACCTACAGCGTGAAGATCCAGAAGAAGTTTA 416
|||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 380 CCCGTTTGTTCTTTCATTC-ACTGACTTGACCTACAGCGTGAAGATCCAGAAGAAGTTTA 438
Query 417 ATCCCCTCGCTTGCTGCAGGAAG-TCACGAAACGGTTCCTCGGTGAACACTAAGATACTA 475
||||||||||||||||||| ||| ||| |||| | |||||||||||||||||||||||||
Sbjct 439 ATCCCCTCGCTTGCTGCAG-AAGGTCAGGAAATGATTCCTCGGTGAACACTAAGATACTA 497
Query 476 TTGAACGGAATTTCAGGTGAAGCCCATGAAGGGGAGATGATTGGCGGTTCTTGGAGCAAG 535
||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 498 TTGAATGGTATTTCAGGTGAAGCCCGCGAAGGGGAGATGAT-GGCGGTTCTTGGAGCAAG 556
Query 536 TGGG 539
||||
Sbjct 557 TGGG 560
> AT2G37362.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT2G37360 | chr2:15673687-15675978 FORWARD
LENGTH=2292
Length=2292
Score = 2460 bits (1332), Expect = 0.0
Identities = 1551/1654 (94%), Gaps = 26/1654 (2%)
Strand=Plus/Minus
Query 542 AACCGGATCGCCAAAGACAGCCTCAGGGGATCCATTACCTTAAACGGAGAAGTTCTTGAA 601
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1641 AACCGGATCGCAAAAGATAGCCTCAGGGGATCCATTACCTTAAACGGAGAAGTTCTTGAA 1582
Query 602 TCCAGAC-TGCAGAAAGTCATATCGGCTTACGTGATGCAAGACGACCTTCTCTTCCCGAT 660
|| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1581 TCAAG-CATGCAGAAAGTCATATCGGCTTACGTGATGCAAGACGACCTTCTCTTCCCGAT 1523
Query 661 GCTTACCGTGGAGGAAACTCTAATGTTCTCTGCAGAGTTCAGGCTCCCTCGTTCACTCTC 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1522 GCTTACCGTGGAGGAAACTCTAATGTTCTCTGCAGAGTTCAGGCTCCCTCGTTCACTCTC 1463
Query 721 CAAGAAGAAGAAGAAAGCACGGGTTCAAGCTCTGATTGACCAATTGGGCCTAAGGAGCGC 780
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 1462 CAAGAAGAAGAAGAAAGCAAGGGTTCAAGCTCTGATTGACCAATTAGGCCTAAGGAGCGC 1403
Query 781 TGCAAAAACCGTGATTGGTGATGAAGGCCACAGAGGCGTGTCTGGAGGAGAAAGGAGACG 840
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1402 TGCAAAAACCGTGATTGGTGATGAAGGCCACAGAGGAGTGTCTGGAGGAGAAAGGAGACG 1343
Query 841 GGTTTCAATTGGAAACGACATAATCCATGACCCAATTATCCTCTTTCTCGATGAGCCAAC 900
||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1342 GGTATCAATTGGAAACGACATAATCCATGACCCAATCATCCTCTTTCTAGATGAGCCAAC 1283
Query 901 CTCAGGGCTTGACTCTACGAGCGCCTACATGGTTATCAAAGTGCTTCAGAGAATCGCACA 960
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1282 CTCAGGGCTCGACTCTACAAGCGCCTACATGGTTATCAAAGTCCTTCAGAGAATCGCACA 1223
Query 961 GAGTGGCAGCATAGTTATCATGTCCATCCATCAGCCAAGTTACAGAATCATGGGT-TTGC 1019
||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || |
Sbjct 1222 AAGTGGCAGCATAGTTATCATGTCAATCCATCAGCCTAGTTACAGAATCATGGGTCTT-C 1164
Query 1020 TAGATCAGTTAATCTTCCTTTCTAGGGGAAACACGGTTTATAGCGGCTCACCAACACATC 1079
|||||||||||||||||||||||| ||||||||| || || |||||||||||||||||||
Sbjct 1163 TAGATCAGTTAATCTTCCTTTCTAAGGGAAACACAGTCTACAGCGGCTCACCAACACATC 1104
Query 1080 TCCCTCAGTTCTTCTCAGAGTTCGAGCACCCGATTCCTGAAAACGAGAACAAAACAGAGT 1139
||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1103 TCCCTCAGTTCTTCTCAGAATTCAAGCACCCAATTCCTGAAAACGAGAACAAAACAGAGT 1044
Query 1140 TCGCTCTCGATCTCATCCGAGAGCTGGAAAATTCTGCAGAAGGAACCAAGTCACTTGTCG 1199
||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct 1043 TCGCTCTCGATCTCATCCGAGAGCTGGAATATTCTACAGAAGGAACCAAGCCACTTGTCG 984
Query 1200 AGTTCCACAAGAAATGGCGAGCAAAGCAAGCGCAATCACCAAGCTATAGCAATGGTAACA 1259
||||||||||| ||||||||||||||||||| | | | |||||| | ||| |||||
Sbjct 983 AGTTCCACAAGCAATGGCGAGCAAAGCAAGC--A--C-C-AAGCTACAACAACAATAACA 930
Query 1260 AGAAAAACAACAACGCATCT-CTC--AAAGAAGCGATAACCGCGAGTATCTCCAGAGGGA 1316
||| ||||| ||||| |||| ||| |||||||||||||||||||||||||| |||||||
Sbjct 929 AGAGAAACACCAACGTATCTTCTCTCAAAGAAGCGATAACCGCGAGTATCTCAAGAGGGA 870
Query 1317 AACTCGTCTCTGGAGCAAC-AA-A-CAACTCATCAAACCTAACACCATCATTCCAAACAT 1373
||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 869 AACTCGTCTCTGGAGCAACGAACAACAACTCATCAAACCTAACACCATCATTCCAAACAT 810
Query 1374 TCGCCAATCCTTTCTGGATCGAAATGATCGTCATAGGCAAACGCGCTATACTAAACTCAA 1433
||||||||||||||||||| |||||||| || ||||||||||| |||||| |||||||||
Sbjct 809 TCGCCAATCCTTTCTGGATTGAAATGATAGTAATAGGCAAACGTGCTATATTAAACTCAA 750
Query 1434 TGA-GACAACCAGAGCTCCTCGGAATGCGACTAGGAGCTGTAATGGTGACCGGAATCATC 1492
|| |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 749 -GAAGACAACCAGAACTCCTCGGAATGAGACTAGGAGCTGTAATGGTCACCGGAATCATC 691
Query 1493 CTAGCCACAATGTTCACTAACCTAGACAATTCCCCAAAAGGAGCACAAGAACGTCTAGGA 1552
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 690 CTAGCTACAATGTTCACTAACCTAGACAATTCCCCAAAAGGAGCACAAGAACGTTTAGGA 631
Query 1553 TTCTTCGCATTCGCAATGTCCACAACATTCTACACATGTGCAGAAGCAATCCCAGTGTTT 1612
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 630 TTCTTCGCATTCGCAATGTCAACAACATTCTACACATGTGCAGAAGCAATCCCAGTCTTT 571
Query 1613 CTAGAAGAACGTTACATATTCATGAGAGAAACAGCTTACAACGCCTACCGGAGATCCTCC 1672
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 570 CTACAAGAACGTTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCCTCC 511
Query 1673 TACGTCCTCTCTCAATCCATAATCTCAATCCCTGCCTTAATCTTCCTCTCCGCAAGCTTC 1732
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 510 TACGTCCTCTCTCAATCCATAATCTCAATCCCGGCCTTAATCGTCCTCTCCGCAAGCTTC 451
Query 1733 GCCGCCACAACATTCTGGGCCGTTGGTCTCTCCGGAGGCTCCAGTGGTTTCCTCTTCTTC 1792
|||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||
Sbjct 450 GCCGCCACAACATTCTGGGCCGTTGGTCTCGACGGAGGCGCCAATGGTTTCTTCTTCTTC 391
Query 1793 TTCCTCACAATCCTCGCCTCATTCTGGGCCGGAAGCTCCTTCGTAACATTCCTCTCCGGC 1852
| | |||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct 390 TACTTCACAATCCTAGCCTCATTTTGGGCAGGAAGCTCCTTCGTAACGTTCCTCTCCGGC 331
Query 1853 GTCGTCGCCAA-CGTAATGCTCGGATTCACAATCGTTGTAGCGATCCTCGCTTACTTCCT 1911
|| | |||| ||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 330 GTTATA-CCAAACGTAATGCTCGGATTCACAGTCGTAGTAGCGATCCTCGCTTACTTCCT 272
Query 1912 CCTCTTCTCCGGATTCTTCATCTC-CAGAGATCGAATCCCTGTTTACTGGCTCTGGTTCC 1970
|||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||
Sbjct 271 CCTCTTCTCCGGATTCTTCATCTCTC-GAGATCGAATTCCTGTTTACTGGCTCTGGTTCC 213
Query 1971 ATTACATCTCCTTAGTGAAATACCCTTACGAAGGAGTGTTGCAGAACGAATT-CGAAGAT 2029
||||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 212 ATTACATCTCCTTGGTGAAATACCCTTACGAAGGAGTGTTGCAGAACGAATTTCAAA-AT 154
Query 2030 CCGACGAAATGTTTCGTCAGAGGAGTTCAGATTTTT-GATAATTCGCCGTTGGGGGAGTT 2088
||||||| |||||||| ||||||||||||| || || || ||||||||||||||||||||
Sbjct 153 CCGACGAGATGTTTCGCCAGAGGAGTTCAG-TTATTCGACAATTCGCCGTTGGGGGAGTT 95
Query 2089 TCCGAACGACGTGAAATTGAATCTGTTGAAGAGTATGAGCGGTGTTTTGGGGACGAATGT 2148
||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 94 TCCGAACGATGTGAAAGTGAATCTGTTGAAGAGTATGAGCGGTGTATTGGGGACGAATGT 35
Query 2149 GACGGCGGAGACTTGTGTGACGACGGGGATTGAT 2182
||||||||||||||||||||||||||||||||||
Sbjct 34 GACGGCGGAGACTTGTGTGACGACGGGGATTGAT 1
Score = 765 bits (414), Expect = 0.0
Identities = 502/544 (92%), Gaps = 8/544 (1%)
Strand=Plus/Minus
Query 1 TCCTATTCATTTCTTCTTTGTGGGTATGAGCTATATAACCCATATAGCCTGAGAAGATTA 60
|||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 2215 TCCTATTCGTGTCTTCTTTGTGGGTATGAGCTATATAACCCACATAACCTGAGAAGATTA 2156
Query 61 AGACaaaaaaacggaaaaaaTGTCTGGCTTG---GGAAAATTATCTCCGGCCAAACGAGT 117
||||||||| || | ||||||||||||||| ||||||| ||||||||||||||| ||
Sbjct 2155 AGACAAAAATACATAGAAAATGTCTGGCTTGCTCGGAAAATCATCTCCGGCCAAACGGGT 2096
Query 118 AGACGGCAACAATGATCTTCCTCTGTTTTATGTAAACACGATGTCCGTGGAGCCTCAACG 177
|| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |
Sbjct 2095 TGATGGCAACAATGATCTTCCTATGTATTATGTAAACCCGATGTCCGTGGAGCCTCAAGG 2036
Query 178 TCGTCCAAGAGACACGCCTAGAGTCTCTGTCACATTCGCCGAGCATCTTATGAATGTGGA 237
|||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2035 ACGTCCAAGCGACACGACTAGAGTCTCTGTCACATTCGCCGAGCATCTTATGAACGTGGA 1976
Query 238 GGATGCAAGGAATGATGAAAGTGCAAGTAGCCGGGCTCTAGGAATTGCCTCACCAATCAC 297
||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1975 GGATGCAAGGAATGATGAAAGTGCAAGTAGCCGGGCTCTGGGAATTGCCTCACCTATCAA 1916
Query 298 TTCTTCTGCATCCTCTTTCAATTCATGGACCTCTGCTCCTGCTTCTTCTATATCGTCTTC 357
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 1915 TTCTGCTGCATCCTCTTTCAATTCATGGGCCTCTGCTCCTGCTTCTTCTATATCTTCTTC 1856
Query 358 CCCGTTCGTTCTTTCATTCAAC-GACTTGACCTACAGCGTGAAGATCCAGAAGAAGTTTA 416
|||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1855 CCCGTTTGTTCTTTCATTC-ACTGACTTGACCTACAGCGTGAAGATCCAGAAGAAGTTTA 1797
Query 417 ATCCCCTCGCTTGCTGCAGGAAG-TCACGAAACGGTTCCTCGGTGAACACTAAGATACTA 475
||||||||||||||||||| ||| ||| |||| | |||||||||||||||||||||||||
Sbjct 1796 ATCCCCTCGCTTGCTGCAG-AAGGTCAGGAAATGATTCCTCGGTGAACACTAAGATACTA 1738
Query 476 TTGAACGGAATTTCAGGTGAAGCCCATGAAGGGGAGATGATTGGCGGTTCTTGGAGCAAG 535
||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1737 TTGAATGGTATTTCAGGTGAAGCCCGCGAAGGGGAGATGAT-GGCGGTTCTTGGAGCAAG 1679
Query 536 TGGG 539
||||
Sbjct 1678 TGGG 1675
> AT3G53510.1 | Symbols: | ABC-2 type transporter family protein
| chr3:19837209-19839862 REVERSE LENGTH=2654
Length=2654
Score = 1624 bits (879), Expect = 0.0
Identities = 1471/1750 (84%), Gaps = 67/1750 (4%)
Strand=Plus/Plus
Query 575 ATTACCTTAAACGGAGAAGTTCTTGAATCCAGACTGCAGAAAGTCATATCGGCTTACGTG 634
||||| ||||| || |||||||||||||| || ||||| ||||||||||| ||||| |||
Sbjct 849 ATTACTTTAAATGGGGAAGTTCTTGAATCTAGCCTGCATAAAGTCATATCAGCTTATGTG 908
Query 635 ATGCAAGACGACCTTCTCTTCCCGATGCTTACCGTGGAGGAAAC-TCTAATGTTCTCTGC 693
|||||||| || ||||||||||||||||| |||||||| || || | | ||||| |||||
Sbjct 909 ATGCAAGATGATCTTCTCTTCCCGATGCTCACCGTGGAAGAGACGT-TGATGTTTTCTGC 967
Query 694 AGAGTTCAGGCTCCCTCGTTCACTCTCCAAGAAGAAGAAGAAAGCACGGGTTCAAGCTCT 753
||||||||||| || | || || || |||||||| ||||| |||||||||||||||||
Sbjct 968 TGAGTTCAGGCTTCCAAGCTCGCTTTCTAAGAAGAAAAAGAAGGCACGGGTTCAAGCTCT 1027
Query 754 GATTGACCAATTGGGCCTAAGGAGCGCTGCAAAAACCGTGATTGGTGATGAAGGCCACAG 813
|||||| || | ||||| |||| ||| |||||||||||||| |||||||| || |||||
Sbjct 1028 GATTGATCAGCTCGGCCTGAGGAACGCAGCAAAAACCGTGATCGGTGATGAGGGACACAG 1087
Query 814 AGGCGTGTCTGGAGGAGAAAGGAGACGGGTTTCAATTGGAAACGACATAATCCATGACCC 873
||| ||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||||
Sbjct 1088 AGGTGTGTCTGGAGGAGAAAGGAGAAGGGTCTCAATTGGAACCGATATAATCCATGACCC 1147
Query 874 AATTATCCTCTTTCTCGATGAGCCAACCTCAGGGCTTGACTCTACGAGCGCCTACATGGT 933
||||| |||||||||||||||||||| || || ||||||||||| || || ||||||||
Sbjct 1148 GATTATTCTCTTTCTCGATGAGCCAACTTCTGGTCTTGACTCTACCAGTGCATACATGGT 1207
Query 934 TATCAAAGTGCTTCAGAGAATCGCACAGAGTGGCAGCATAGTTATCATGTCCATCCATCA 993
| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1208 TGTCAAAGTGCTTCAGAGAATCGCACAAAGCGGCAGCATAGTTATCATGTCCATCCATCA 1267
Query 994 GCCAAGTTACAGAATCATGGGTTTGCTAGATCAGTTAATCTTCCTTTCTAGGGGAAACAC 1053
||| |||||||||||| |||| || || ||| ||||||||||||| ||||||||||||||
Sbjct 1268 GCCGAGTTACAGAATCTTGGGATTACTCGATAAGTTAATCTTCCTATCTAGGGGAAACAC 1327
Query 1054 GGTTTATAGCGGCTCACCAACACATCTCCCTCAGTTCTTCTCAGAGTTCGAG-CACCCGA 1112
||||| |||||||| || ||||| |||||||||||||||||||| |||| | ||||| |
Sbjct 1328 CGTTTACAGCGGCTCCCCGACACACCTCCCTCAGTTCTTCTCAGAATTCG-GTCACCCAA 1386
Query 1113 TTCCTGAAAACGAGAACAAAACAGAGTTCGCTCTCGATCTCATCCGAGAGCTGGAAAATT 1172
||||||||||||||||||| | ||||| || |||||||| ||||| ||||||||| |||
Sbjct 1387 TTCCTGAAAACGAGAACAAGCCGGAGTTTGCACTCGATCTTATCCGTGAGCTGGAAGATT 1446
Query 1173 CTG-CAGAAGGAACCAAGTCACTT-GTCGAGTTCCACAAGAAATGGCGAGCAAAGCAAGC 1230
| | |||||||||| || || ||| ||||||||||||||| ||||||||||||||||| |
Sbjct 1447 C-GCCAGAAGGAACGAAATC-CTTAGTCGAGTTCCACAAGCAATGGCGAGCAAAGCAAAC 1504
Query 1231 GCAATCACCAAGCTATAGCAATGGTAACAAGAAAAACAACAACGCATCTCTCAAAGAAGC 1290
| | ||||| | ||| | | ||| ||||| ||| | |||||||||||| ||
Sbjct 1505 -C--T---CAAGCCAGAGC-A--G----AAG--AAACACCAATGTATCTCTCAAAGATGC 1549
Query 1291 GATAACCGCGAGTATCTCCAGAGGGAAACTCGTCTCTGGAGCAACAAACAACTCATCAAA 1350
|| | ||| |||||||| ||||| || || ||||| |||||||||||| || | | |
Sbjct 1550 AATCAGCGCAAGTATCTCGAGAGGTAAGCTTGTCTCCGGAGCAACAAAC--CT-A--AGA 1604
Query 1351 CCTAACACCATCATTCCAAACATTCGCCAATCCTTTCTGGATC-GAAATGATCGTCATAG 1409
| ||||||| ||||| || || || || ||||||| | |||||| |||| || |
Sbjct 1605 --T-----CATCATTTCAAACCTTTGCAAACCCATTCTGGA-CTGAAATGCTCGTAATTG 1656
Query 1410 GCAAACGCGCTATACTAAACTCAATG-AGACAACCAGAGCTCCTCGGAATGCGACTAGGA 1468
| ||||| ||||||||||||||| | |||||||||||||| ||||||| || ||||||
Sbjct 1657 GTAAACGATCTATACTAAACTCAA-GAAGACAACCAGAGCTATTCGGAATCCGCCTAGGA 1715
Query 1469 GCTGTAATGGTGACCGGAATCATCCTAGCCACAATGTTCACTAACCTAGACAATTCCCCA 1528
|||||| | || |||||||| |||||||||||||| ||| || ||||||||||| |||
Sbjct 1716 GCTGTACTAGTCACCGGAATGATCCTAGCCACAATATTCTGGAAACTAGACAATTCACCA 1775
Query 1529 AAAGG-AGCACAAGAACGTC-TAGGATTCTTCGCATTCGCAATGTCCACAACATTCTACA 1586
| ||| | ||||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct 1776 AGAGGTA-TACAAGAACG-CTTAGGGTTCTTCGCATTCGCAATGTCCACAACATTCTACA 1833
Query 1587 CATGTGCAGAAGCAATCCCAGTGTTTCTAGAAGAACGTTACATATTCATGAGAGAAACAG 1646
|||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||
Sbjct 1834 CATGTGCAGAAGCAATACCAGTCTTTCTACAGGAACGTTACATATTCATGAGAGAAACAG 1893
Query 1647 CTTACAACGCCTACCGGAGATCCTCCTACGTCCTCTCTCA-ATCCATAATCTCAATCCCT 1705
|||||||||| |||||| |||| || ||||||||| |||| | | |||||||| ||||||
Sbjct 1894 CTTACAACGCTTACCGGCGATCATCATACGTCCTCGCTCACA-CAATAATCTCCATCCCT 1952
Query 1706 GC-CT--TAATCTTCCTCT-CCGCAAGCTTCGCCGCCACAACATTCTGGGCCGTTGGTCT 1761
|| || ||||||| || ||||| ||||||||| ||||||||| |||||| || ||
Sbjct 1953 GCTCTCATAATCTTA-TCCGCCGCA---TTCGCCGCCTCAACATTCTCGGCCGTAGGACT 2008
Query 1762 CTCCGGAGGCTCC-AGTGGTTTCCTCTTCTTCTTCCTCACAATCCTCGCCTCATTCTGGG 1820
| ||||||||||| || || ||||||||||||||| ||||||||||| || | || ||||
Sbjct 2009 CGCCGGAGGCTCCGAG-GGATTCCTCTTCTTCTTCTTCACAATCCTCACCGCGTTTTGGG 2067
Query 1821 CCGGAAGCTCCTTCGTAACATTCCTCTCCGGCGTCGTCGC-CAACGTAATGCTCGGATTC 1879
||||||| |||||||| || ||| | |||||||| ||| | || ||| ||| ||||||||
Sbjct 2068 CCGGAAGTTCCTTCGTGACGTTCTTATCCGGCGTAGTCTCACA-CGTGATGATCGGATTC 2126
Query 1880 ACAATCGTTGTAGCGATCCTCGCTTACTTCCTCCTCTTCTCCGGATTCTTCATCTCCAGA 1939
|| | |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 2127 ACGGTGGTTGTAGCAATCCTCGCTTATTTCCTCCTCTTCTCCGGATTCTTCATCTCTAGA 2186
Query 1940 GATCGAATCCCTGTTTACTGGCTCTGGTTCCATTACATCTCCTTAGTGAAATACCCTTAC 1999
||||||||||| | |||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct 2187 GATCGAATCCCACTCTACTGGATCTGGTTCCATTACCTCTCCCTAGTGAAATACCCTTAC 2246
Query 2000 GAAGGAGTGT-TGCAGAACGAATTCGAAGATCCGACGAAATGTTTCGTCAGAGGAGTTC- 2057
||||| || | | ||||||||||||||||||||||||||||| ||||||||||| | ||
Sbjct 2247 GAAGGTGT-TCTACAGAACGAATTCGAAGATCCGACGAAATGCTTCGTCAGAGG-GATCC 2304
Query 2058 AGATTTTTGATAATTCGCCGTTGGGGGA-GTTTCCGAAC-GACGTGAAATTGAATCTGTT 2115
|||| || || ||||||||| |||| | ||| || ||| | ||||||| | | || |
Sbjct 2305 AGATGTTCGACAATTCGCCGCTGGGACAAGTT-CC-AACCGCCGTGAAAATCAGCCTCCT 2362
Query 2116 GAAGAGTATGAGCGGTGTTTTGGGGA-CGAATGTGACGGCGGAGACTTGTGTGACGACGG 2174
|||||| |||||||| |||||||||| | || ||||||||||||||||| || |||||||
Sbjct 2363 GAAGAGCATGAGCGGCGTTTTGGGGATC-AACGTGACGGCGGAGACTTGCGTAACGACGG 2421
Query 2175 GGATTGATATATTGAAGCAGCAAGGGATTACGGATTTTAGTAAATGGAATTGTTTGTGGA 2234
| || |||||| |||| |||||||| || ||||| | || ||||||||||| |||||||
Sbjct 2422 GAATCGATATACTGAAACAGCAAGGAATCACGGAGATAAGCAAATGGAATTGCTTGTGGA 2481
Query 2235 TTACTGTTGCTTGGGGATTTTTCTTTAGGGTTTTGTTTTATTTCACTTTGTTGATTGGGA 2294
| ||||| ||||||||||| |||||||||||| | || || ||||| | ||||| || |
Sbjct 2482 TCACTGTAGCTTGGGGATTCTTCTTTAGGGTTCTCTTCTACTTCACACTCTTGATCGGAA 2541
Query 2295 GCAAGAACAA 2304
||||||||||
Sbjct 2542 GCAAGAACAA 2551
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117469275300
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5