BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482764 Length=1159 Score E Sequences producing significant alignments: (Bits) Value AT2G37380.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1677 0.0 > AT2G37380.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39370.1); Has 1284 Blast hits to 422 proteins in 114 species: Archae - 0; Bacteria - 90; Metazoa - 125; Fungi - 151; Plants - 136; Viruses - 0; Other Eukaryotes - 782 (source: NCBI BLink). | chr2:15686758-15688003 FORWARD LENGTH=1246 Length=1246 Score = 1677 bits (908), Expect = 0.0 Identities = 1095/1181 (93%), Gaps = 30/1181 (3%) Strand=Plus/Plus Query 3 AGACAGGGA-TTGGAGGAATCAGAATCAAGAACACATGTTTTGTCCAACGATGGTGATGA 61 ||||| ||| ||| | |||||||||||||||||||||||| |||||| |||||||||||| Sbjct 67 AGACATGGATTTGCATGAATCAGAATCAAGAACACATGTTCTGTCCACCGATGGTGATGA 126 Query 62 TGGGTTACATAGACATGGAAGTCAA----tc-tc-tcttcttcttcttctacttcttcct 115 | ||||||||||||||||||||||| || || |||||||||||||||||||| |||| Sbjct 127 T-GGTTACATAGACATGGAAGTCAATCTCTCTTCTTCTTCTTCTTCTTCTACTTCGTCCT 185 Query 116 caagcttcttcagcttcCCCGTCACTTCCTCGCCGCCGCAAAGCAGAGAGTTCGAGTTTC 175 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 186 CAAGCTTCTTCAGCTTCCCCGTCACTTCCTCCCCGCCGCAAAGCAGAGAGTTCGAGTTTC 245 Query 176 AAATGTGTTCCTCCGCCGTAGCTTCCGGTGAATCAACGACATCTCCGGCCGATGAGCTTT 235 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 246 AAATGTGTTCCTCCGCCGTAGCTTCCGGTGAATCAACCACATCTCCGGCTGATGAGCTTT 305 Query 236 TCTACAAAGGTCAACTTCTTCCTCTTCATCTCCCTCCTCGTCTCAAAATGGTACAAAAGC 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 306 TCTACAAAGGTCAACTTCTTCCTCTTCATCTCCCTCCTCGTCTCAAAATGGTACAAAAGC 365 Query 296 TTCTTCTCGCTTCCTCCTCC---ACCGCCGCAACAGAAACTCCTATTTCCCCACGCGCCA 352 |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct 366 TTCTTCTCGCTTCCTCCTCCTCCACCGCCGCAACGGAAACTCCTATCTCCCCACGCGCCG 425 Query 353 CCG----T--ATCCTCGCCGCGGAGATTCAGTAGCAGTGAGATCGGACAAGACGAGCAAT 406 ||| | || || || ||||||||||||||| |||||||||||||||||||| ||| Sbjct 426 CCGCAGATGTATTGTCTCCACGGAGATTCAGTAGCTGTGAGATCGGACAAGACGAG-AAT 484 Query 407 -GTTTCTTTGAGATTTCAACAGAGCTCAAGAGATTCATTGAGAGCAACGAGAATCATCTT 465 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 485 TGTTTCTTTGAGATTTCGACAGAGCTCAAGAGATTCATCGAGAGCAACGAGAATCATCTT 544 Query 466 GGAAACAGTTGGAGCAAAAAGATCAAACATTCATCGATTACACAAAAGCTTAAAGCCTCA 525 ||||||||||||||||||||||||||||||||||| || |||||||| || ||||||||| Sbjct 545 GGAAACAGTTGGAGCAAAAAGATCAAACATTCATCCATAACACAAAAACTCAAAGCCTCA 604 Query 526 CGCGCTTACATAAAAGCTCTGTTCTCAAAACAAACCTGCTCAGATTCATCAGAGATCAAT 585 ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 605 CGCGCTTACATAAAAGCTCTGTTCTCAAAACAAGCCTGTTCAGATTCATCAGAGATCAAT 664 Query 586 CTAAGATTCAAAATTGAACCTTGTAAAGTCTCAAGAAAGAAGAACCCTTTTATAAACAGT 645 | |||||||||||||||||||| |||||||||||||||||||||||| ||| | |||||| Sbjct 665 CCAAGATTCAAAATTGAACCTTCTAAAGTCTCAAGAAAGAAGAACCCATTTGTGAACAGT 724 Query 646 GAAAAACCTCAATTGTTTCATAGAAGATCCTTCTCTGGTGTGATACAGAGACATTCTCAA 705 || || |||| || ||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 725 GAGAATCCTCTGTTAATTCATAGGAGATCTTTCTCTGGTGTGATACAGAGACATTCTCAA 784 Query 706 GCTAAGTGTTCAACAtcttcttcttcttcttcCTCTGCATCGTCGTTGTCTTCTTCGTTC 765 || ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 785 GCAAAGTGTTCAACATCTTCTTCTTCTTCTTCCTCTGCGTCTTCGTTGTCTTCTTCGTTC 844 Query 766 AGTTTTGGATCAAACGGGTCTTTGGATCTGCAGACACTGATGAGAAGCAGCAACGCGAGT 825 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 845 AGTTTTGGATCAAACGGGTCGTTGGATCTGCAGACACTGATGAGAAGCAGCAATGCGAGT 904 Query 826 GATAACTCCATTGAAGGAGCGATTGAGCATTGTAAGCAGTCGTTTACTAGTAGGAAGAGC 885 ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 905 GATAACTCCATTGAAGGAGCGATCGAGCATTGTAAGCAGTCGTTTACTACTAGGAAGAGT 964 Query 886 AATGTGACTGAATCTGAGCTCTGTTCTTCAAGAACCTCTGTTTCTACTTGTGGTGACCTT 945 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 965 AATGTGACTGAATCTGAGCTCTGTTCTTCAAGAACCTCTGTTTCTACTTGTGGTGACCTT 1024 Query 946 GAAAAAGATTGAAATTCTCAGATCTGTGAAGCGCTCTCT----GATTCTCATTCCAAAAG 1001 || ||||||||| |||||||||||||||| || |||||| ||||| ||||||||||| Sbjct 1025 GATAAAGATTGAGATTCTCAGATCTGTGACGCTCTCTCTCTCTGATTC-CATTCCAAAAG 1083 Query 1002 GATACaaaaaaaaaaaaaa-aaaaa-tcataaaaaaGATAActtttctcttctactctga 1059 ||||||||||||||| | | ||||| | | ||||||||||||||| ||||||||||||| Sbjct 1084 GATACAAAAAAAAAATACATAAAAAGT--TCAAAAAGATAACTTTT-TCTTCTACTCTGA 1140 Query 1060 tttttttacttttgtattttagattcttttgtgtgcttttgtt-tagaagtttgCTGAAT 1118 |||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 1141 TTTTTTTATTTTTGTAATTTAGATTCTTTTGTGTGCTTTTGTTGTAGAAGTTTGCTGAAT 1200 Query 1119 TCGAGGTTTCTTTATGTGTTATAAATGTTAATGCTACCAAA 1159 ||||||||||||||||||||||||||||||||||||| ||| Sbjct 1201 TCGAGGTTTCTTTATGTGTTATAAATGTTAATGCTACAAAA 1241 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56877217485 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5