BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482789
Length=2565
Score E
Sequences producing significant alignments: (Bits) Value
AT2G37840.1 | Symbols: | Protein kinase superfamily protein | ... 4163 0.0
AT3G53930.2 | Symbols: | Protein kinase superfamily protein | ... 1469 0.0
> AT2G37840.1 | Symbols: | Protein kinase superfamily protein
| chr2:15851803-15856301 FORWARD LENGTH=2631
Length=2631
Score = 4163 bits (2254), Expect = 0.0
Identities = 2454/2551 (96%), Gaps = 12/2551 (0%)
Strand=Plus/Plus
Query 24 CGAATCCATTTTCAACCCGACGGGTCGTGAAATT-CCCAAAAGATTCCTCTTTCTCAGCT 82
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 51 CGAATCC-TTTTCAACCCGACGGGTCGTGAAATTCCCCAAAAGATTCCTCTTTCTCAGCT 109
Query 83 CAATTTCCAAAAGCTCCGACCTTTTCGATCCTCTAGATTCTCGGCGCCGGTTTCTCGGAG 142
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 110 CAATTTCCAAAAGCTCCGACCTTTACGATCCTCTAGATTCTCGGCGCCGGTTTCTCGGAG 169
Query 143 AAAACAATGGCTCAGTTCACGGGTCGGGTCGTTGGAGACTACTTGGTGGGTCGTCAAATC 202
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 170 TAAATAATGGCTCAGTTCACGGGTCGGGTCGTTGGAGACTACTTGGTGGGTCGTCAAATC 229
Query 203 GGGTCGGGTTCGTTCTCTGTTGTTTGGGAAGCGAGGCACCGCGTTGACGGTACTGAGGTT 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 GGGTCGGGTTCGTTCTCTGTTGTTTGGGAAGCGAGGCACCGCGTTGACGGTACTGAGGTT 289
Query 263 GCTATCAAAGAGATCGCCATGGACAGGCTTAACAAGAAGCTGCAGGAAAGTCTCATGTCT 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 290 GCTATCAAAGAGATCGCCATGGACAGGCTTAACAAGAAGCTGCAGGAAAGTCTCATGTCT 349
Query 323 GAGATTTTTATCTTGAGGAGGATCAATCATCCTAACATCATCCGTATGATCGACATGATC 382
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 350 GAGATTTTTATCTTGAGGAGGATCAATCATCCTAACATCATCCGTCTGATCGACATGATC 409
Query 383 AAGTCTCCTGGGAAAGTACATTTGGTGTTGGAGTACTGCAAAGGAGGTGATTTGTCTGTG 442
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 410 AAGTCTCCTGGGAAAGTACATTTGGTGTTGGAGTACTGCAAAGGAGGTGACTTGTCTGTG 469
Query 443 TATGTCCAAAGACATGGGATTGTCCCTGAAGCTACTGCTAAGCATTTCATGCAGCAGTTA 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 470 TATGTCCAAAGACATGGGATTGTCCCTGAAGCTACTGCTAAGCATTTCATGCAGCAGTTA 529
Query 503 GCGGCCGGCTTACAAGTTCTTCGTGACAATAATATTATTCACCGAGATTTGAAGCCTCAG 562
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 530 GCGGCCGGCTTACAAGTTCTTCGTGACAATAATATTATTCACCGAGATTTAAAGCCTCAG 589
Query 563 AATCTTCTTCTATCCACAGATGAAAACGATGCAGATCTGGAGATTGCTGATTTTGGATTT 622
|||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||
Sbjct 590 AATCTTCTTCTATCCACAAATGAAAATGATGCAGATCTGAAGATTGCTGATTTTGGATTT 649
Query 623 GCAAGATCGTTGCAACCTAGGGGGCTTGCAGAGACTTTATGCGGTTCACCATTGTATATG 682
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 650 GCAAGATCGTTGCAACCTAGGGGGCTCGCAGAGACTTTATGTGGTTCACCATTGTATATG 709
Query 683 GCCCCAGAGATCATGCAACTTCAGAAGTATGATGCAAAGGCAGATCTCTGGAGTGTTGGT 742
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 710 GCCCCAGAGATCATGCAACTCCAGAAGTATGATGCAAAGGCAGATCTCTGGAGTGTTGGT 769
Query 743 GCTATTTTATTTCAACTTGTGACAGGCAGAACCCCTTTTACAGGAAACAGCCAAATTCAG 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 770 GCTATTTTATTTCAACTTGTGACAGGCAGAACCCCTTTTACAGGAAACAGCCAAATTCAG 829
Query 803 TTGCTCCAAAACATTATAAGATCAACCGGATTACATTTTCCAGGGGACTGCAGAGATTTA 862
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 830 TTGCTCCAAAACATTATAAGATCAACCGAATTACATTTTCCAGGGGACTGTAGAGATTTA 889
Query 863 AGTTTGGACTGTATAGATCTGTGTCAGAAGTTACTGCGCCGTAATCCAGTGGAACGTTTG 922
|| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 AGCTTGGACTGCATAGACCTGTGTCAGAAGTTACTGCGCCGTAATCCAGTGGAACGTTTG 949
Query 923 ACATTTGAAGAGTTCTTTAATCACCCTTTCCTTTCGGACAGGCAGTCATATGATTTCTCA 982
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 950 ACATTTGAAGAGTTCTTTAATCACCCTTTCCTTTCGGACAGGCAGTCATATGATTTCTCC 1009
Query 983 AGGAGTAGATTGGGCTTAAGAACAATGGACGGTTTTCTTTCGTCTGGGAGCAGTCCCTCG 1042
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1010 AGGAGTAGATTGGGGTTAAGAACAATGGACGGTTTTCTTTCGTCTGGAAGCAGTCCCTCG 1069
Query 1043 AGAAACATGGAAGAAAGTTCTCAAGAAGACTGTTTGCCATTCCTTCTAGATGATGATTCT 1102
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1070 AGAAACATGGAAGAAAGTTCTCAAGAAGACTGTTTGCCGTTCCTTCTAGATGATGATTCT 1129
Query 1103 AGTGGACCTGAGGGGAGCCCTTCATATTTGAAAAAGACATCCTCAATGAAGTCGTCCTCT 1162
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1130 AGTGGACCTGAGGGGAGCCCTTCATATTTAAAAAAGACATCCTCAATGAAGTCGTCCTCT 1189
Query 1163 GGATTTAAAGTCGATACCAGAATTGAGAGAAAGGAGGCGGAATCTAGTCCTTTAAAATAT 1222
||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||
Sbjct 1190 GGAATTAAAGTCGATACGAGAATTGAGAGGAAGGAGGTGGAATCTAGTCCTTTAAAACAT 1249
Query 1223 ACAGAACTTACTTCTGAATATAGTAGTGTCGACCAAAAAGTGGAAAACAATAGATTTAGG 1282
|||||||||||||||| |||||||||| || ||||||||||||||||| ||||||||||
Sbjct 1250 ACAGAACTTACTTCTGGATATAGTAGTTTCAACCAAAAAGTGGAAAACGATAGATTTAGA 1309
Query 1283 TTTGAAACTCAAATAAATTCGGATAGGAGAAACCGCAGGGAACCAACAGGATTGACTGAT 1342
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1310 TTTGAAACTCAAATAAATTCAGATAGGAGAAACCGCAGGGAACCGACAGGATTGACTGAT 1369
Query 1343 TCCAGATCACTTATTGCTCCAGGAGGAGTAGATGATTCTCAAGACTCCATGGATCAAGAT 1402
|| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1370 TCTAGATCACTTATTGCTCCAGGAAGAGTAGATGATTCTCAAGACTCCATGGATCAAGAC 1429
Query 1403 TTCGTTCTCGTATCTGGACCACCAGTGGATATGCCATCATCTTCATCAAGTTCTTCGAAG 1462
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1430 TTCGTTCTCGTATCTGGACCACCAGTAGATATGCCATCATCTTCATCAAGTTCTTCGAAG 1489
Query 1463 CCTTATAATTTTCCATTCAAGTCTCAGTCTCCTCCTGTAGAGTTATTCAACAGAAGCATA 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1490 CCTTATAATTTTCCATTCAAGTCTCAGTCTCCTCCTGTAGAGTTATTCAACAGAAGCATA 1549
Query 1523 AGTTCAACGGCTCCCATGCCAATAATTGGTGCTACTGGCAACAGCATTGGTCAGTTTGGG 1582
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1550 AGTTCAACGGCTCCCATGCCAATAATTGGTGCTACTAGCAACAGCATTGGTCAGTTTGGG 1609
Query 1583 AGCCTGGACAGTCAGAACTCTGCCCCGAGCACTTCTCATGGGTCTCTAGATCTTGGGGAT 1642
||||| ||||||||| | ||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1610 AGCCTTGACAGTCAGTATTCTGCCCCGAGCACTTCTCATGGGTCTCTGGATCTTGGTGAT 1669
Query 1643 GCTTTTGAACAGCCATCAACTCACAGCCTGACAAGAATCAGGTCTCTGAGAAAATGTGCA 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1670 GCTTTTGAACAGCCATCAACTCACAGCCTGACAAGAATCAGGTCTCTGAGAAAATATGCA 1729
Query 1703 GCAACGATTGCAGAACTAGTTCATGAAAGGATTGAGTCTGACAAACATCTAGAAGCTTTC 1762
||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 1730 GCAACAATTGCAGAACTAGTTTATGAAAGGATTGAATCTGACAAACATCTAGAAGCTTTC 1789
Query 1763 TCGATCCAATTGGCGATTCTGGCAATTTGGAAGCAGGCACTGCACATATGTCATACTCAG 1822
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1790 TCGATCCAATTGGCGATTCTGGCAATTTGGAAACAGGCACTGCACATATGTCATACTCAG 1849
Query 1823 GCAATTTCAGGTTTGGAAGGAAGCCCAAGCCAAGACATTAACAAACTAAGAAGTAGCAGC 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 GCAATTTCAGGTTTGGAAGGAAGCCCAAGCCAAGACATTAACAAACTAAGAAGTAGCAGC 1909
Query 1883 CTGAAACACGATACCCACAATTCTGATAAAGTCACTGATCTCAGCCATGATGGATCAGAG 1942
|||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| |||
Sbjct 1910 CTGAAACACGATACTCACAGTTCTAATAAAGTCACTGATCTCAGCCATGATGGATCGGAG 1969
Query 1943 GAGATATCCTCTCAGATTCAGAGGCAATTTATACAGGAGATTGAGCTTGCTGAAGAACTT 2002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1970 GAGATATCCTCTCAGATTCAGAGGCAATTTATACAGGAGATTGAGCTTGCTGAAGAACTT 2029
Query 2003 GCCAAGAGTATTGAACCTGGAAATATAAAAATGCCAGATGCAATGGAGACGATATTTGAA 2062
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2030 GCCAAGAGTATTGAACCTGGAAATACAAAAATGCCAGATGCAATGGAGACGATATTTGAA 2089
Query 2063 GCAGCGCTTGATCTTGGAAAACTTGGGGGAGTTAAGGAGGTTATGGGAGATATAGAGAAC 2122
||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 2090 GCAGCACTTGATCTTGGAAAACTTGGAGGAGTTAAGGAGGTTATGGGAGATACAGAGAAC 2149
Query 2123 GCCGGAAACCAATATTCGAAAGCAGTGCGTTTGCTGGTATTCCTTTTAGTAGAAGCACCA 2182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2150 GCCGGAAACCAATATTCGAAAGCAGTGCGTTTGCTGGTATTCCTTTTAGTAGAAGCACCA 2209
Query 2183 ACGCTGATTATGAATCCGCCATTGTCTCTCACAAACTCAGTTAGGTATCGTCTCCGAACA 2242
| ||||||| ||||||||||| ||||||||||||||||||| |||||||||||| | |||
Sbjct 2210 ATGCTGATTCTGAATCCGCCACTGTCTCTCACAAACTCAGTCAGGTATCGTCTCAGGACA 2269
Query 2243 TATATCGATTTCCTCAGCAGAAGATTAAAACATCTCCAATCACATAGAAGAAGTTCAGGT 2302
||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| |
Sbjct 2270 TATATTGATTTCCTCAGCAGAAGATTAAAACATCTGCAGTCACATAGAAGAAGTTCAGCT 2329
Query 2303 GGTCAGATGCAAGGATCATCGTTAACTATGATGAACAGACAATCATAAACCCATTCACTC 2362
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 2330 GGTCAGATGCAAGGATCATCGTTAGCTATGATGAACAGACAATCATAAATCCATTCACTT 2389
Query 2363 GGATTGGCTTCTCTTGTTTCGTGTGTTCCTTTT-T-aaaaaaaaaT-----TCTAAAAGA 2415
|| |||| |||||||||||| ||||||| |||| | ||||||||| |||||||||
Sbjct 2390 GGGTTGGGTTCTCTTGTTTCTTGTGTTC-TTTTATGAAAAAAAAAAAAAAATCTAAAAGA 2448
Query 2416 GAAAAATATATTTGTTTT-GTACAGCAAAAATCATATATTCTTATTCTTTTGGGATTAAT 2474
||||||| ||| |||||| ||||||||| | ||||||||||||||||||||||| |||||
Sbjct 2449 GAAAAATGTATATGTTTTTGTACAGCAACA-TCATATATTCTTATTCTTTTGGGGTTAAT 2507
Query 2475 CTGGAGGGACTTTGGGGTTATGATGTGTGTGATGGATGTTGTAACTTGTAACATTTTCTT 2534
|||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 2508 CTGGAGGGACGTTGGGGAAATGATCTGTGTGATGGATGTTGTAACTTGTAACATTTTCTT 2567
Query 2535 GTTCTATTTTGATCCTAATCCTTTGGTTTTT 2565
|||||||||||||| ||||||| || |||||
Sbjct 2568 GTTCTATTTTGATCTTAATCCTATGTTTTTT 2598
Score = 52.8 bits (28), Expect = 2e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 1 TCTCTATCTCTCTCTTCATTATCCGAAT 28
||||||||||||||||||||||||||||
Sbjct 14 TCTCTATCTCTCTCTTCATTATCCGAAT 41
> AT3G53930.2 | Symbols: | Protein kinase superfamily protein
| chr3:19966352-19970813 FORWARD LENGTH=2561
Length=2561
Score = 1469 bits (795), Expect = 0.0
Identities = 1422/1718 (83%), Gaps = 70/1718 (4%)
Strand=Plus/Plus
Query 187 GGTGGGTCGTCAAATCGGGTCGGGTTCGTTCTCTGTTGTTTGGGAAGCGAGGCACCGCGT 246
||||||||| |||||||||||||| ||||| || || |||||||||| |||||| | ||
Sbjct 252 GGTGGGTCGACAAATCGGGTCGGGGTCGTTTTCCGTGGTTTGGGAAGGGAGGCATCTTGT 311
Query 247 TGACGGTACTGAGGTTGCTATCAAAGAGATCGCCATGGAC-AGGCTTAACAAGAAGCTGC 305
| | || || | ||||||||||| |||||||| |||| | ||||||| |||||| |||
Sbjct 312 TCATGGCACCGTCGTTGCTATCAAGGAGATCGCTATGG-CTCGGCTTAATAAGAAGTTGC 370
Query 306 AGGAAAGTCTCATGTCTGAGATTTTTATCTTGAGGAGGATCAATCATCCTAACATCATCC 365
| || ||||||||||| |||||| | ||||| |||| ||| ||||||||||||||||| |
Sbjct 371 AAGAGAGTCTCATGTCGGAGATTATCATCTTAAGGAAGATTAATCATCCTAACATCATTC 430
Query 366 G-TATGATCGACATGATCAAGTCTCCTGGGAAAG-TACATTTGGTGTTGGAGTACTGCAA 423
| | | |||||||||||| || |||| ||| ||| || ||||||||||||||||||| ||
Sbjct 431 GCT-TTATCGACATGATCGAGGCTCCCGGG-AAGATAAATTTGGTGTTGGAGTACTGTAA 488
Query 424 AGGAGGTGATTTGTCTGTGTATGTCCA-AAGACATGGGATTGTCCCTGAAGCTACTGCTA 482
||| |||||| ||||| ||||| | || || |||||| | ||| ||||||||||||||||
Sbjct 489 AGGTGGTGATCTGTCTATGTATATTCACAA-ACATGGAAGTGTTCCTGAAGCTACTGCTA 547
Query 483 AGCATTTCATGCAGCAGTTAGCGGCCGGCTTACAAGTTCTTCGTGACAATAATATTATTC 542
||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 548 AGCATTTTATGCTGCAGTTAGCGGCTGGCTTACAAGTTCTTCGTGACAATAATATCATTC 607
Query 543 ACCGAGATTTGAAGCCTCAGAATCTTCTTCTATCCACAGATGAAAACGATGCAGATCTGG 602
|||| ||||| |||||||||||||||||||||||||||||||| || ||||||| ||||
Sbjct 608 ACCGCGATTTAAAGCCTCAGAATCTTCTTCTATCCACAGATGATAATGATGCAGCTCTGA 667
Query 603 AGATTGCTGATTTTGGATTTGCAAGATCGTTGCAACCTAGGGGGCTT-GCAGAGACTTTA 661
||||||| |||||||||||||||||||||||||| |||| |||| || ||||| ||||||
Sbjct 668 AGATTGCCGATTTTGGATTTGCAAGATCGTTGCAGCCTA-GGGGTTTGGCAGAAACTTTA 726
Query 662 TGCGGTTCACCATTGTATATGGCCCCAGAGATCATGCAACTTCAGAAGTATGATGCAAAG 721
|| ||||||||| ||||||||||||||||||| ||||| ||||| || ||||||||||||
Sbjct 727 TGTGGTTCACCACTGTATATGGCCCCAGAGATTATGCAGCTTCAAAAATATGATGCAAAG 786
Query 722 GCAGATCTCTGGAGTGTTGGTGCTATTTTATTTCAACTTGTGACAGGCAGAACCCCTTTT 781
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 787 GCAGATCTCTGGAGTGTTGGTGCTATATTATTTCAACTTGTGACAGGCAGAACCCCTTTT 846
Query 782 ACAGGAAACAGCCAAATTCAGTTGCTCCAAAACATTATAAGATCAACCGGATTACATTTT 841
||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct 847 ACAGGAAACAGCCAAATTCAGTTGCTCCAGAACATTATAAGATCAACTGAATTACATTTT 906
Query 842 CCAGGGGACTGCAGAGATTTAAGTTTGGACTGTATAGATCTGTGTCAGAAGTTACTGCGC 901
|||| ||||| |||||||| ||| ||||||| |||||| || |||||| |||||||
Sbjct 907 CCAGCAGACTGTAGAGATTTGAGTACCGACTGTAAAGATCTATGCCAGAAGCTACTGCGT 966
Query 902 CGTAATCCAGTGGAACGTTTGACATTTGAAGAGTTCTTTAATCACCCTTTCCTTTCGGAC 961
||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| |||
Sbjct 967 CGTAATCCAGTGGAACGTTTGACGTTTGAAGAGTTTTTTCATCATCCTTTCCTTTCAGAC 1026
Query 962 AGGCAGTCATATGATTTCTCAAGGAGTAGATTGGGCTTAA-GAACAATGGACGGTTTTCT 1020
| || |||||||||||| ||||||||||||| | || | |||| ||| ||| |||||
Sbjct 1027 AAACAATCATATGATTTCACAAGGAGTAGATTAGA-TTCACGAACTATGAACGATTTTCA 1085
Query 1021 TTCGTCTGGGAGCAGTCCCTCGAGAAACATGGAAGAAAGTTCTCAAGAAGACTGTTTGCC 1080
||| || || ||||||||||| ||||| || ||||||| ||||||||||||| | |||||
Sbjct 1086 TTCATCAGGAAGCAGTCCCTCAAGAAATATAGAAGAAATTTCTCAAGAAGACGGGTTGCC 1145
Query 1081 ATTCCTTCTAGATGATGATTCTAGTGGACCTGAGGGGAGCCCTTCATATTTGAAAAAGAC 1140
||| || |||||||||||||||||||||||||||| |||||||||| ||| ||| | ||
Sbjct 1146 GTTCTTTTTAGATGATGATTCTAGTGGACCTGAGGGAAGCCCTTCATCTTTTAAACATAC 1205
Query 1141 ATCCTCAATGAAGTCGTCCT-CTGGATTTAAAGTCGATACCAGAATTGAGAGAAAGGAGG 1199
||| | |||||||| || | | ||||||| || | | | || || || |||||
Sbjct 1206 TTCCCCGATGAAGTCATCTTAC-GGATTTA--GT-GTTG--A-AA--GA-AG---GGAGG 1252
Query 1200 CGGAATCTA-GTCCTTTAAAATATACA-GAA-CTTACTTCT-GAATATAGTAGTGTC-GA 1254
| | || || ||||||| ||| | ||| | | ||| |||| || |||||||| ||| |
Sbjct 1253 CAGCAT-TAAGTCCTTTGAAA-A-ACATGGATCTTTCTTCCAGA-TATAGTAGAGTCAGT 1308
Query 1255 CCAAAAAGTGGAAAACAATAGATTT-AGGTTTGAAA-CTCA-A-ATAAATTCGGATAGGA 1310
| | | || |||| ||||| |||| | |||||| | || | || | | | ||||| |
Sbjct 1309 C-ATAGAGCAGAAACCAATA-ATTTCAAGTTTGAGGGC-CATAGATTA-T-CAGATAGAA 1363
Query 1311 GA-AACCGCAGGGAACCAACAGGATTGAC-TGATTCCAGATCACTTATTGCTCCA-GGAG 1367
| || || |||| || | || || ||||||||||||| ||| | | ||| |||
Sbjct 1364 GCCAATT-CA---AACCGTCAAGCTT-ACCTGATTCCAGATCATTTAGTAC-CCAAGGAA 1417
Query 1368 GAGTAGATGATTCTCAAGACTCCATGGATCAAGATT-TCGTTCTCG-TATCTGGACCACC 1425
|||||| ||||||| |||||| ||||||||||||| | ||||| | |||||||||||||
Sbjct 1418 GAGTAGGGGATTCTCCAGACTCAATGGATCAAGATTAT-GTTCT-GATATCTGGACCACC 1475
Query 1426 AGTGGATATGCCATCATCTTCATCAAGTTCTTCGAAGCCTTAT-AATTTTCCATTCAAGT 1484
|| ||||| |||||||||||||| ||||| ||||||||| | |||| |||||||| |
Sbjct 1476 GGTTGATATACCATCATCTTCATCTGGTTCTCCGAAGCCTT-TCAATTACCCATTCAAAT 1534
Query 1485 CTCAGTCTCCTCCTGTAGAGTT-ATTCAACAGAA--GCA--TAAGTTCAACGGCTCCCAT 1539
| || ||||||||||||||||| || ||| |||| | | ||| || ||||||||| ||
Sbjct 1535 CACATTCTCCTCCTGTAGAGTTCAT-CAAGAGAAATGTAACTAATTT-AACGGCTCCTAT 1592
Query 1540 GCCAATAATTGGTGCTACTGGCAACAGCATTGGTC-AGTTTGGGAGCCTGGACAGTCAGA 1598
||||||| | ||||||||||||||| | || ||| | ||||| ||| |||| |||||||
Sbjct 1593 GCCAATAGCTAGTGCTACTGGCAACAACCTTAGTCGA-TTTGGAAGCTTGGAGAGTCAGA 1651
Query 1599 ACTCTGCCCCGAGCACTTCTCATGGGTCTCTAGATCTTGGGGATGCTTTTGAACAGCCAT 1658
| | | |||| | ||||| ||||||||||| ||||||| |||||||||||||||||||
Sbjct 1652 ATTGTATCCCGGGTACTTCCCATGGGTCTCTGGATCTTGTAGATGCTTTTGAACAGCCAT 1711
Query 1659 CAACTCACAGCCTGACAAGAATCAGGTCTCTGAGAAAA-TGTGCAGCAACGATTGCAGAA 1717
||||| ||||| ||||||||||| ||||| || |||| |||||||| | || ||||||
Sbjct 1712 CAACTAACAGCTTGACAAGAATCCGGTCTTTGC-AAAAGTGTGCAGCTGCAATAGCAGAA 1770
Query 1718 CTAGTTCATGAAAGGATTGAGTCTGACAAACATCTAGAAGCTTTCTCGATCCAATTGGCG 1777
| |||||||||||| ||| || || ||| |||||||||||||||||||| ||| |
Sbjct 1771 TTGGTTCATGAAAGGGGTGAAAATGGTAAGCATTTAGAAGCTTTCTCGATCCAACTGGTG 1830
Query 1778 ATTCTGGCAATTTGGAAGCAGGCACTGCACATATGTCATACTCAGGCAATTTCAGGTTTG 1837
||||| ||||||||||| || ||||| ||||| ||||||||||||||| | || ||| |
Sbjct 1831 ATTCTTGCAATTTGGAATCAAGCACTACACATCTGTCATACTCAGGCAGTCTCGGGTATA 1890
Query 1838 GAAGGAAGCCCAAGCCAAGACATTAACAAACTAAGAAG 1875
|||||||||| |||||||||||||| | || ||||
Sbjct 1891 GAAGGAAGCCTGCTCCAAGACATTAACAGAGTAGGAAG 1928
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127323701334
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5