BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482794 Length=967 Score E Sequences producing significant alignments: (Bits) Value AT2G37880.1 | Symbols: | Protein of unknown function, DUF617 |... 1504 0.0 > AT2G37880.1 | Symbols: | Protein of unknown function, DUF617 | chr2:15860633-15861618 FORWARD LENGTH=986 Length=986 Score = 1504 bits (814), Expect = 0.0 Identities = 903/945 (96%), Gaps = 9/945 (1%) Strand=Plus/Plus Query 25 AGAGAGAGAAAGAGAATAAAGAAGGATGACGAAAATTGACTCTCTCCGTCGATTTCTTCT 84 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 48 AGAGAGAGAGAGAGAACAAAGAAGGATGACGAAAATTGACTCTCTCCGTCGATTTCTTCT 107 Query 85 TCCATGTATCACACCTCCGACGAACT-CAACCACCGTATCAACAACATCCACCGGAGCTT 143 |||||||||| || |||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 108 TCCATGTATCTCAACTCCGACGAA-TCCAACCACCGTATCAACAACATCCACCGGAGCTT 166 Query 144 CCAAGAAACGTCTCAGTACTTCCCTAAGAGACGATATCGACGTTCAAGATTCAGCTTCTT 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 167 CCAAGAAACGTCTCAGTACTTCCCTAAGAGACGATATCGACGTTCAAGATTCAGCTTCTT 226 Query 204 CCTCCGCCTCTTCCTCCGAGGCTACTTCCGCCGCCGCTGACTATAACCTATCCGCCGTCA 263 ||||||||||||||||||||||||||||||||| | ||||| | | |||||||||||| Sbjct 227 CCTCCGCCTCTTCCTCCGAGGCTACTTCCGCCG--TC-GACTACAGCATATCCGCCGTCA 283 Query 264 CGGTGCCGCAGAGACCGTCGAAGACGATGGTGATTGGTACGATATTCGGTAGAAGAAAGG 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 284 CGGTGCCGCAGAGACCGTCGAAGACGATGGTGATTGGTACGATATTCGGTAGAAGAAAGG 343 Query 324 GACACGTGTGGTTCTGTGTTCAACACGACCGTCTCTCTGTTAAACCAATCCTTCTCCTCG 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 344 GACACGTGTGGTTCTGTGTTCAACACGACCGTCTCTCTGTTAAACCAATCCTTCTCCTCG 403 Query 384 AGCTTTCAATAGCTACTAGCCAGTTAGTTCACGAGATGGGTTCGGGTCTTGTTCGTGTGG 443 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 404 AGCTTTCAATAGCTACGAGCCAGTTAGTTCACGAGATGGGTTCGGGTCTTGTTCGTGTCG 463 Query 444 CTTTAGAATGCCCGACCCGACCCGAATTGAAGTCGTGTTTGCTAAGATCCGTACCCGTTT 503 |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct 464 CTTTAGAATGCCCGACCCGACCCGAATTGAAGTCTTGCTTGCTGAGATCCGTACCCGTTT 523 Query 504 GGACGATGTTCTGTAACGGAAGAAAGCTAGGTTTTGCTGTACGGAGAAGTGCTAATGAAG 563 |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 524 GGACGATGTTTTGTAACGGAAGGAAGCTAGGGTTTGCTGTACGGAGAAGTGCTAATGAAG 583 Query 564 AAACGAGGTTGATGTTGAAGAGATTGGAGTCTATGACGGTTGGTGCGGGTGTGTTGCCAT 623 | |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct 584 AGACGAGGATGATGTTGAAGAGATTGGAGTCTATGACTGTTGGAGCGGGTGTGTTGCCAT 643 Query 624 CTGGATCCGGGTTGGGTGGGTCGGGTGAATCGGATACTGATGAGGTTATGTATATGAGGG 683 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | Sbjct 644 CTGGATCCGGGTTGGGTGGGTCTGATGAATCGGATACTGATGAGGTTATGTATATGAGAG 703 Query 684 CGAATTATGAGCATGTTGTTGGTAGCTCTGACTCGGAGTCGTTTCATCTCATTAACCCGG 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 704 CGAATTATGAGCATGTTGTTGGTAGCTCTGACTCGGAGTCGTTTCATCTCATTAACCCTG 763 Query 744 ATGCTAACTCGGCTCAAGAACTCAGTATCTTCTTGCTCAGGACCTCTAGTTGAATTGGCC 803 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 764 ATGCTAACTCTGCTCAAGAACTCAGTATCTTCTTGCTCAGGACCTCTAGTTGAATTGGCC 823 Query 804 TTTTGGGGTAACTTATGAAT-ACTTTTCATCAAGTTCAGAGATTTTGAAGTCAGATGAGA 862 |||||||||||||||||||| | ||||||||| ||||||||||| |||||||| |||||| Sbjct 824 TTTTGGGGTAACTTATGAATCA-TTTTCATCATGTTCAGAGATTGTGAAGTCACATGAGA 882 Query 863 AAAATTGAGATTTTTTCAGAGTTCTTGATGAGATATTTCTTTGTGGGTCGTTGGTTCTTG 922 || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct 883 AAGATTGAGATTTTG--AGAGTTCTTGATGAGATATTTCTTTGTGGGTCGTTAGTTCTAG 940 Query 923 ATCTTTGTAAAACAtttttttGTTAGAAAGATTGATGAttttttt 967 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 941 ATCTTTGTAAAACATTATTTTGTTAGAAAGATTGATGATTTTTTT 985 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47320566474 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5