BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482876 Length=1335 Score E Sequences producing significant alignments: (Bits) Value AT2G38660.1 | Symbols: | Amino acid dehydrogenase family prote... 1949 0.0 > AT2G38660.1 | Symbols: | Amino acid dehydrogenase family protein | chr2:16165958-16168386 FORWARD LENGTH=1335 Length=1335 Score = 1949 bits (1055), Expect = 0.0 Identities = 1247/1335 (93%), Gaps = 32/1335 (2%) Strand=Plus/Plus Query 7 TCACTCGTTGAATCCTAAACTCCGCTATGCCTAGCGATATTTTTCAACGCCATTGACGAC 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 TCACTCGTTGAATCCTAAACTCCGGTATGCCTAGCGATATTTTTCAACGCCATTGACGAC 60 Query 67 ACTTTATATACCACTGTGACTGTTCTTTTAGTTTCGATCATGTTAATGATCGCGAGGAAA 126 ||||||||| | | |||| |||| | | | ||||||||||||||||||||| Sbjct 61 GCTTTATATA-C-C----ACTG---TTTT-G---AG-T-ATGTTAATGATCGCGAGGAAA 105 Query 127 GCTTTGGCCTCAGCGCATAGTAAGGC-TATTCGTTTGACAACAAGGGACGTACATTGTTT 185 ||||||||||| ||||||| |||||| | |||||||| |||||||||| |||||||| || Sbjct 106 GCTTTGGCCTCGGCGCATACTAAGGCGT-TTCGTTTGGCAACAAGGGATGTACATTGCTT 164 Query 186 TAGTTCCATCTTAGTGTCTCCTCCTCTGGTGTCCCTTGACTTGCCTGAAGATTGGATTCC 245 ||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| Sbjct 165 TAGTTCCATCTTAGTGTCTCCTCCTCTCGTGTCACTTGACTTGCCTGAAAATTGGATTCC 224 Query 246 TTACTCTGATCCTCTACCACCTGTTTCCTTTGAGACTGAACAGAAGACTGTGGTGATAGA 305 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 225 TTACTCTGATCCTCCACCTCCTGTTTCCTTTGAGACTGAACAGAAGACTGTGGTGATAGA 284 Query 306 TGGAAATGTTATCGCTGAGGAAATTAGAACAAAGATTATTAGTGAAGTGGGGAAGATGAA 365 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 285 TGGTAATGTTATCGCTGAGGAAATCAGAACAAAGATTATTAGTGAAGTGGGGAAGATGAA 344 Query 366 AAAGGCTGTTGGAAAAGTCCCTGGTCTTGCCGTTGTTTTGGTTGGTCAACAAAGAGACTC 425 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 345 AAAGGCTGTTGGAAAAGTCCCTGGTCTTGCTGTTGTTTTGGTTGGTGAACAAAGAGACTC 404 Query 426 CCAAACTTATGTTCGCAACAAAATTAAAGCTTGTGAAGAAACTGGCATTAAATCTGTTTT 485 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 405 GCAAACTTATGTTCGCAACAAAATTAAAGCTTGTGAAGAAACTGGCATTAAATCTGTTTT 464 Query 486 GGCTGAATTGCCAGAGGATTGTACTGAAGGACAGATTCTTAGTATATTGA-AAAATTTCA 544 ||||||||| ||||||||||||||||||||||||||| | ||| |||||| |||| |||| Sbjct 465 GGCTGAATTACCAGAGGATTGTACTGAAGGACAGATTATCAGTGTATTGAGAAAA-TTCA 523 Query 545 ATGAAGACACTTCCATTCATGGGATTCTTGTGCAGCTTCCGTTGCCCCAACATCTTGATG 604 |||||||||| || ||||| || ||||||||||| ||||| || |||||||||||| ||| Sbjct 524 ATGAAGACACGTCTATTCACGGAATTCTTGTGCAACTTCCTTTACCCCAACATCTTAATG 583 Query 605 AATCAAAAATCTTGAATATGGTGAGATTGGAGAAAGATGTTGATGGGTTTCATCCATTAA 664 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 584 AATCAAAAATCTTGAATATGGTGAGATTGGAGAAAGATGTTGATGGGTTTCATCCATTAA 643 Query 665 ACGTGGGAAATCTTGCAATGAGAGGGAGGGAACCGCTGTTTGTATCTTGCACTCCTAAGG 724 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 644 ACGTGGGGAATCTTGCAATGAGAGGGAGGGAACCGCTGTTTGTATCTTGCACTCCTAAGG 703 Query 725 GCTGTGTGGAGTTGTTGATAAGAGCAGGCGTTGAAATAGCAGGAAAAAATGCTGTGGTGA 784 ||||||||||||||||||||||| | || ||||||||||||||||||||||||||||| | Sbjct 704 GCTGTGTGGAGTTGTTGATAAGAACGGGTGTTGAAATAGCAGGAAAAAATGCTGTGGTCA 763 Query 785 TAGGAAGAAGCAACATCGTTGGACTACCAATGTCTTTATTATTGCAGAGGCATGACGCGA 844 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 764 TAGGCAGAAGCAACATCGTTGGACTACCAATGTCTTTATTATTGCAGAGGCATGACGCGA 823 Query 845 CAGTAAGCACGGTGCATGCGTTTACAAAGGATCCAGAGCACATTACTAGGAAGGCGGATA 904 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 824 CAGTAAGCACGGTGCATGCGTTTACAAAGGATCCAGAGCACATTACTAGGAAGGCGGATA 883 Query 905 TCGTTATAGCAGCAGCGGGTATACCCAATTTAGTTCGTGGAAGTTGGCTCAAGCCTGGAG 964 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 884 TCGTTATAGCAGCAGCGGGTATACCTAATTTAGTTCGTGGAAGTTGGCTTAAGCCTGGAG 943 Query 965 CAGTTGTCATTGATGTTGGAACATCTCCAGTTGAGGATAGTAGCTGTGAGTATGGTTACC 1024 ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| Sbjct 944 CAGTTGTCATTGATGTTGGAACAACTCCAGTCGAGGATAGTAGCTGTGAGTTTGGTTACC 1003 Query 1025 GTCTTGTCGGGGATGTATGTTACGAGGAAGCTTTAGGTGTTGCCTCGGCTATCACTCCTG 1084 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 1004 GTCTTGTCGGGGATGTATGTTACGAGGAAGCGTTAGGTGTTGCCTCGGCTATCACTCCCG 1063 Query 1085 TTCCTGGAGGAGTTGGACCAATGACGATCACCATGCTACTATGCAATACTTTAGATGCTG 1144 | || |||||||||||||| |||||||||||||||||||||||||||||||| || |||| Sbjct 1064 TACCGGGAGGAGTTGGACCTATGACGATCACCATGCTACTATGCAATACTTTGGAGGCTG 1123 Query 1145 CTAAGCGGATATTCCTCTGA-TCATGGTATCTCTGTCTATTACTAAAT-T-TT--GTAAA 1199 |||||||||| ||||||||| | ||||||||||||||||||||||||| | || |||| Sbjct 1124 CTAAGCGGATCTTCCTCTGAGT-ATGGTATCTCTGTCTATTACTAAATATATTTTGTAAT 1182 Query 1200 ATTAGATAGGAGACTCCATGTTGTGTTGGAGTTATTAACAATCTCTTTCAATTTGAATTA 1259 ||||||||||||||||||| ||| | | |||||||||| |||||||| | |||||| Sbjct 1183 GTTAGATAGGAGACTCCATGCTGT-TCG-AGTTATTAACGATCTCTTT---T--GAATTA 1235 Query 1260 TTATATAATAGACCTGGCGATTGTGATGCCATGGTTTATCCTAACTCATCAACATCTTTA 1319 || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1236 TTGTATAATAGACCTGGCGATTGTGATGCCATGGTTTATCCTAACTCATCAGCATCTTTA 1295 Query 1320 GCATCAAGTTCAACT 1334 ||||||||||||||| Sbjct 1296 GCATCAAGTTCAACT 1310 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65712513405 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5