BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482936 Length=2441 Score E Sequences producing significant alignments: (Bits) Value AT2G39180.1 | Symbols: CCR2, ATCRR2 | CRINKLY4 related 2 | chr2... 3893 0.0 > AT2G39180.1 | Symbols: CCR2, ATCRR2 | CRINKLY4 related 2 | chr2:16344151-16346665 REVERSE LENGTH=2515 Length=2515 Score = 3893 bits (2108), Expect = 0.0 Identities = 2336/2447 (95%), Gaps = 11/2447 (0%) Strand=Plus/Plus Query 1 ATGCAACCCAATTC-C-CA-CTTCTTCTTCTTCACCATTTCATCACTCATCATTACTGTT 57 |||||||||||||| | || |||| || || ||||||||||||||||||||||||| ||| Sbjct 58 ATGCAACCCAATTCTCACATCTTCGTCATCATCACCATTTCATCACTCATCATTACAGTT 117 Query 58 TCTGGGTATGGCTCAACAGGCACAATCGCAGCAGCTTTTGGCGAAAACGGATTCTTCTGC 117 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 118 TCTGCGTATGGCTCAACAGGCACAATCGCAGCAGCTTTCGGCGAAAACGGATTCTTCTGC 177 Query 118 GCCATTGACGCAAGTGGGAAGCAAGAAGCCATCTGTTGGGATAGAGGAAACACTAACCGA 177 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 178 GCCATTGACGCAAGTGGGAAGCAAGAAGTCATCTGTTGGGATAGAGGAAACACTAACCGA 237 Query 178 TCTTTAAACCGACCACCC-GGTGAAATCTCCGGTTATTCTCCTCCAATGACTTCACTTTC 236 || ||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 238 TCATTAAACCGACC-CCCAGGTGAAATCTCCGGTTATTCTCCTCCAATGACTTCTCTTTC 296 Query 237 CGGTGGTGAAGGTTTTCTCTGCGCCATTACGTCGAACACTTCGCGTGCGTTTTGTTGGAA 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 CGGTGGTGAAGGTTTTCTCTGCGCCATTACGTCGAACACTTCGCGTGCGTTTTGTTGGAA 356 Query 297 CCTTGAAGATCCTTCTGAGAATCTCGTTCCTCGAGCTTTTCAGTATAATTCTTACTTACA 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 CCTTGAAGATCCTTCTGAGAATCTCGTTCCTCGAGCTTTTCAGTATAATTCTTACTTACA 416 Query 357 GATTGCTTCTGGTAGCAATCATGTTTGTGCTATAAGTGGATTGTACTATTCAGGTCCTGA 416 |||||||||||||| |||||||||||||||||| ||||||||||| || ||||||||||| Sbjct 417 GATTGCTTCTGGTAACAATCATGTTTGTGCTATTAGTGGATTGTATTACTCAGGTCCTGA 476 Query 417 TTATGGTCCTGTTCATTGTTGGGAGTATAGTGATAACACTAATTTCACTTCTGGTCTTCT 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 477 TTATGGTCCTGTTCATTGTTGGGAGTATAGTGATAACACTAATTTCACTTCTGGTCTTCT 536 Query 477 TTGGAATTCTTCTTTTCATAATCCTTATATAGATAGTCTCATGTTTCGTAAGATTGTTTC 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 TTGGAATTCTTCTTTTCATAATCCTTATATAGATAGTCTCATGTTTCGTAAGATTGTTTC 596 Query 537 TGGAGATGGGTTTTCTTGTGGTGTTACTAAAGATGGAGACTTGGTTTGTTGGGGACCAAA 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 597 TGGAGATGGGTTTTCTTGTGGTGTTACTAAAGATGGAGACTTGGTTTGTTGGGGACCAAA 656 Query 597 ATCAAACCTTTTGAATTTCTCCAATAATGAAGAATTCGAGGTTTTAGCTTCTGGGAGGAA 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 657 ATCAAACCTTTTGAATTTCTCCAATAATGAAGAATTCGAGGTTTTAGCTTCTGGGAGGAA 716 Query 657 CTCTGTTTGTGGTGTCTCTAAAGATTCAGGTCAACTTCAATGCTTTGGAGATGAAACAGA 716 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 717 CTCTGTTTGTGGTGTCTCTAAAGATTCAGGTCAACTTCATTGCTTTGGAGATGAAACAGA 776 Query 717 GTTTGGTGT-GTTACCGAACCGGCCTCGGTTTATCGCGCTTTCAGCTGGTGCTAATCATT 775 ||||||| | |||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct 777 GTTTGGT-TCGTTACCAAACCGGCCTCGGTTTATTGCTCTTTCAGCTGGTGCTAATCATT 835 Query 776 ATTGTGGTATCCGTGAGGATGATCATGGGGTTGAGTGTTGGGGAAGAAACTTGAATTCTT 835 |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 836 ATTGTGGTATACGTGAGGATGATCATGGAGTTGAGTGTTGGGGAAGGAACTTGAATTCTT 895 Query 836 CGTCGTCAGCTTCAGCTCCTAATACTTCCGGGTTTGTGGCGATTTCGTCTTCGGATTCTA 895 | || ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 896 CTTCATCATCTTCAGCTCCTAATACTTCAGGGTTTGTGGCGATTTCGTCTTCGGATTCAA 955 Query 896 CAACTTGTGGAGTTAGAGAGCTTGATTTGGTTCTTGATTGTTGGAGAGTTCATGATTCTT 955 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 956 CAACTTGTGGAGTTAGAGAGCTTGATTTAGTTCTTGATTGTTGGAGAGTTCATGATTCTT 1015 Query 956 CGAAAGCGGATTATAGTCCTCCTTTGGAGTTATGTAGCCCCGGGATGTGTTCGCCTCGCG 1015 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1016 CGAAAGCGGATTATAGTCCTCCTTTGGAGTTATGTAGCCCCGGGATGTGTTCGCCTCGCG 1075 Query 1016 GTAATTGTGGTGATGGCTGGTTTGCTTTCAATGCAAGTATCTTGAAAGAATCTGAGCTCA 1075 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 1076 GTAATTGTGGTGATGGTTGGTTTGCTTTCAATGCAAGTATCTTGAAAGAATCTGAGCTTA 1135 Query 1076 CGAGCTTGTGCTCGTTTCATAACCTCAACATTTGCTTACGCTGTGGAATCAGTTGCTTGG 1135 | |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1136 CTAGCTTGTGCTCGTTTCATAACCTCAACATTTGTTTACGTTGTGGAATCAGTTGCTTGG 1195 Query 1136 AAGGCTATTTTCCTTCCAGTACTTGTAATCCAAATGCGGACCGGGTCTGTACTCCTTGTT 1195 |||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 1196 AAGGGTATTTCCCTTCCAGCACTTGTAATCCAAACGCGGACCGGGTCTGTACTCCTTGTT 1255 Query 1196 CACTATGTCAGAACAGTTCTTGTTACGGTATCTGTAAGATTCGGGTTGCGAAATCGAAAG 1255 | ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||| | Sbjct 1256 CGCTATGTCAGAATAGTTCTTGTTACGGTATCTGTAAGATTCGGGCTACGAAATCGAAGG 1315 Query 1256 AGCACGAGCAGAAAGAGCAGAGAGAGGTACGGAGATTGGTGATCATCATAGGGTGCTCTG 1315 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 AGCATGAGCAGAAAGAGCAGAGAGAGGTACGGAGATTGGTGATCATCATAGGGTGCTCTG 1375 Query 1316 TTTTAGGGTTCTTGGTGATGTTGATCGGTTTGTCTTTCATTCCAAAGATGACAAAAGATA 1375 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 1376 TTTTAGGGTTCTTGGTGATGTTGATTGGTTTGTCTTTCATTCCAAAGATGACAAAAGGTA 1435 Query 1376 GTAAAAGAGATGATGAAGAGAGAAGCAAAATGACTTGTTGCTTCTGTTTCGATAAGAATT 1435 ||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||| Sbjct 1436 GTAAACGAGATGATGAAGAGAGGAGTAAGATGACTTGTTGCTTCTGTTTCGATAAGAATT 1495 Query 1436 CTGTCGAAGCTGATCCTGATCCCGTCCCTCA---GTCAGTTCTTCTACCAACCGCTGTAT 1492 |||| ||||||||||||||||| |||||||| ||| |||||||||||||||||||||| Sbjct 1496 CTGTAGAAGCTGATCCTGATCCTGTCCCTCATCAGTCGGTTCTTCTACCAACCGCTGTAT 1555 Query 1493 CTCTGGGGGAGACCAAAATCTTCCGTCTTTCGGAGCTCAAAGATGCGACTCACGGGTTCA 1552 |||| ||||| ||||| ||||||||||| || || || ||||| |||||||||||||||| Sbjct 1556 CTCTCGGGGAAACCAAGATCTTCCGTCTATCAGAACTTAAAGACGCGACTCACGGGTTCA 1615 Query 1553 AAGAATTCAACGAGCTCGGAAGGGGTAGCTTCGGGTTTGTTTACAAAGCTGTTTTGTCTG 1612 ||||||||||||||||||| || ||||||||||||||||| || ||||||||||| |||| Sbjct 1616 AAGAATTCAACGAGCTCGGGAGAGGTAGCTTCGGGTTTGTCTATAAAGCTGTTTTATCTG 1675 Query 1613 ATGGGATACATGTTGCGGTCAAAAGAGCGAATGCTGCAACGATCATTCACTCTAATAACC 1672 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1676 ATGGGATACATGTTGCGGTCAAAAGAGCGAATGCTGCAACGATCATTCACTCTAATAACC 1735 Query 1673 GAGGTTTCGAGTCGGAGCTAGAGATTCTTTGCAAAATCAGACACAACAATATTGTGAATT 1732 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1736 GAGGTTTCGAGTCCGAGCTAGAGATTCTTTGCAAAATCAGACACAACAATATTGTGAATT 1795 Query 1733 TGTTAGGATATTGCTCGGAGATGGGGGAACGGCTTTTGGTTTATGAGTACATGCCGCACG 1792 |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct 1796 TGTTAGGATACTGCTCAGAGATGGGGGAAAGGCTTTTGGTTTATGAGTACATGCCGCACG 1855 Query 1793 GTACGCTCCATGATCATCTCCATGGAGATCTTTCACAACTGGATTGGAGCATGAGATTGA 1852 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 1856 GTACGCTTCATGATCATCTCCATGGAGATCTTTCACAACTGGACTGGAGCATGAGACTGA 1915 Query 1853 AGATCATGTTGCAGGCTGCAAGAGGACTTGATTACTTACACAACGAAGTAGATCCTCCAA 1912 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1916 AGATCATGTTGCAGGCTGCAAGAGGACTTGATTACTTACACAACGAAGTAGATCCTCCGA 1975 Query 1913 TAATTCATAGAGATGTGAAAACGTCCAACATCTTGTTAGACGGTGAAATGTGCGCAAGAA 1972 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1976 TAATTCACAGAGATGTGAAAACGTCCAACATCTTGTTAGACGGTGAAATGTGCGCAAGAA 2035 Query 1973 TAGCGGATTTCGGATTGGTAAGCTCGAATGAAAGGGATTCAAGCAATAGTGATAGAGAAG 2032 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2036 TTGCGGATTTCGGATTGGTAAGCTCGAATGAAAGGGATTCAAGCAATAGTGATAGAGAAG 2095 Query 2033 GTGATGTGTATGACTTTGGTATTGTGCTTCTTGAGATACTAAGCGGGCGAAAAGCTATCG 2092 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 2096 GTGATGTGTATGACTTTGGTATTGTTCTACTTGAGATACTAAGCGGGCGAAAAGCTATCG 2155 Query 2093 ATAGAGAATCTGATCCTCCCGGAATTGCGGAATGGGCGGTTCCATTGATCAGGAAAGGAA 2152 ||||||| ||||||||| | || |||||||||||||||||||| |||||||||||||||| Sbjct 2156 ATAGAGAGTCTGATCCTGCGGGGATTGCGGAATGGGCGGTTCCTTTGATCAGGAAAGGAA 2215 Query 2153 AAGCAGCGGCGATTATCGATAGGAACATTGGTTTGCCAAGAAATGTAGAGCCTTTGCTTA 2212 ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2216 AAGCAGCGGCGATAATCGATAGGAACATTTGTTTGCCAAGAAATGTAGAGCCTTTGCTTA 2275 Query 2213 AATTGGCTGAATTAGCTGAGCTTGCTGTGAGGGAACACCCCAACGAACGACCCAATATCA 2272 |||||||||| |||||||||||||||||||||||| | | || |||||||| ||||||| Sbjct 2276 AATTGGCTGAGTTAGCTGAGCTTGCTGTGAGGGAAAATTCGAATGAACGACCAAATATCA 2335 Query 2273 AAAATATTCTGAGTTTTCTTGATCTCATCGTCAAGTCTGGACTCACCTTTTA-GTTGCTG 2331 |||||||||| |||||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct 2336 GAAATATTCTGTGTTTTCTTGATCTCATCGTCAAGTCTGGCCTCACTTTTTAAGTTGCTG 2395 Query 2332 AAGCCTCTCAAAATGTGAAATATATTCAGCATTGTTTTTATTTCTCCTTATAAATTGTAT 2391 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 2396 AAGCCTCTCAAAATGTGAAATATATTCAGCATTGTTTTTGTTTCTCCTTACAAATTGTAT 2455 Query 2392 GATAAATTGATTATCAAAGTAATAAACCCACAGATTTGTTTGTCAAA 2438 |||||||||||| ||||||||||||| ||| ||||||||| ||||| Sbjct 2456 GATAAATTGATTGTCAAAGTAATAAAAACACGGATTTGTTTTTCAAA 2502 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 121234316175 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5