BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482947
Length=2512
Score E
Sequences producing significant alignments: (Bits) Value
AT2G39280.2 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 3705 0.0
AT3G55020.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 1934 0.0
AT2G39270.1 | Symbols: | P-loop containing nucleoside triphosp... 132 2e-29
> AT2G39280.2 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr2:16401526-16406854 REVERSE LENGTH=2846
Length=2846
Score = 3705 bits (2006), Expect = 0.0
Identities = 2339/2493 (94%), Gaps = 49/2493 (2%)
Strand=Plus/Plus
Query 37 AGGGATGCATATGGATTTTCTGTGAGGCCTCAGCATGTGCAAAGATACCGAGAATATGTT 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 AGGGATGCATATGGATTTTCTGTGAGGCCTCAGCATGTGCAAAGATACCGAGAATATGTT 384
Query 97 GATATCTACAAGGAGGAGGAAGAGGAGAGGTCAGCCAGGTGGAACAATTTCCTGGAAGTT 156
|||||||||||||||| |||| ||||||||| || ||||||| ||||||||||||| ||
Sbjct 385 AATATCTACAAGGAGGAAGAAGTGGAGAGGTCGGCAAGGTGGAGCAATTTCCTGGAATTT 444
Query 157 CATGCAGAATCTGGC--G-----T--GAATAGATCGTCTGAAAATAATCATGTAC-ATCC 206
||||||||||||||| | | |||| ||||||||||||||| |||||| | ||||
Sbjct 445 CATGCAGAATCTGGCGTGTCACCTACGAATGGATCGTCTGAAAATACTCATGT-CAATCC 503
Query 207 AATTGAGAGTGACaagaaaaaagaagaggaatcaaacaagggtgctgaaagaaaagatct 266
|| ||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 504 AAGTGAAAGTGACAAGAAAAAAGAAAAGGAATTAAACAAGGGTGCTGAAAGAAAAGATCT 563
Query 267 agaa-actgaaaagCCAAGTTCTGATTTAACTCCTGGGAATGCGAGAGAGGAAGATGAAG 325
||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 564 -GAATGCTGACAAGCCAGGTTCTGATTTAACTCCTGGGAATGCGAGAGAGGAAGATGAAG 622
Query 326 TTCCCAGT-GCAGCGAAGAATGTGCACAAATTTCAGTTATGGGCTGAGATCAGACCATCT 384
|||||| | | || |||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 623 TTCCCAATAG-AGAGAAGAATGTGCACAAAGTTCAGTTATGGGCTGAGATCAGGCCATCT 681
Query 385 CTTCAAGCAATTGAGGACTTGATGAGTGCCCGTGTCAAAATGAAGGGGGATTCCACAAAT 444
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 682 CTTCAAGCAATTGAGGACTTGATGAGTGTCCGTGTCAAAATGAAGGGGGATTCCACAAAT 741
Query 445 GGCGAGCAAGAAGCGCAGAAATTGAATTCCTTACCCTCAACTGATGAGACCAAATCTTCA 504
|||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||||||
Sbjct 742 GGCGAGCAAGAAGCTCAGAAATTGAATTCCTTAGCCTCAACTGATGAGACCGAGTCTTCA 801
Query 505 AAGGGTGTGTCTGAGAATGATTCTGAAGACGAGTTCTATGATGTGGAGAGATCAGATCCA 564
||||| || | |||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 802 AAGGGAGTATGTGAGAATGATTCCGAAGACGAGTTCTATGATGCGGAGAGATCAGATCCA 861
Query 565 ATTCAGGATGGTTCTTCAGATGGTGCAAGTGTCTCCAGCATGTCTGCTGCTGCTGACGCA 624
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 862 ATTCAGGATGGTTCTTCAGATGGCACAAGTGTCTCCAGCATGTCTGCTGCTGCTGATGCA 921
Query 625 ACTTCTCTAGTATCTGCATGCCCCTGGAAAGACGAACTTGAAGTTCTTGTTCATGGTGGG 684
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 922 GCTTCCCTAGTATCTGCATGCCCCTGGAAAGACGAACTTGAAGTTCTTATTCATGGCGGT 981
Query 685 GCACCTATGGCTCTGAGGGGTGAGCTCTGGCAAGCATTTGCGGGAGTCAAGAAACGTCGG 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 982 GCACCTATGGCTCTGAGGGGTGAGCTCTGGCAAGCATTTGCGGGAGTCAAGAAACGTCGG 1041
Query 745 GTCAAGAATTATTACCAAAATCTGCTAGCTGCTGATAGTCTAGGAAACGACATAGAGCAG 804
||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 1042 GTCAAGAATTATTACCAAAATCTATTAGCTGCAGATAGTCTAGGAAACGACATAGAGCAG 1101
Query 805 GAGCACATGCAGCATGCAGATGAGAAAGGTTCAAGTACAGACCCCCTCGCTGTCGTGCAA 864
|||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||
Sbjct 1102 GAGCTCATGCAGCATACAGATGAGAAAGGTTCAAGTACAGACCCCCTCTCTGTTGTGGAA 1161
Query 865 AAATGGAAAGGACAGATAGAAAAGGATTTACCCCGGACATTTCCAGGTCATCCTGCCCTA 924
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162 AAATGGAAAGGTCAGATAGAAAAGGATTTACCCCGGACATTTCCAGGTCATCCTGCCCTA 1221
Query 925 GATGATGATTTCAGAGATGCTCTGCGGCGATTGCTAACTGCATATGCTAGGCATAATCCC 984
||||||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||
Sbjct 1222 GATGATGATTTCAGAAATGCTCTGAGGCGATTGCTAACTGCTTATGCCAGGCATAATCCC 1281
Query 985 TCTGTTGGATACTGTCAGGCAATGAATTTCTTCGCTGCACTTTTATTACTTCTGATGCCC 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1282 TCTGTTGGATACTGTCAGGCAATGAATTTCTTCGCTGCACTTTTATTACTTCTGATGCCC 1341
Query 1045 GAAGAGAATGCTTTTTGGTCGCTTATAGGAATCATTGATGACTACTTCCATGATTATTAT 1104
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1342 GAAGAGAATGCTTTTTGGTCGCTTACAGGAATCATTGATGACTACTTCCATGATTATTAT 1401
Query 1105 TCAGAAGAGATGATCGAGTCCCAGGTTGACCAACAAGTTCTGGAGGAGTTGCTTCGAGAG 1164
|||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 1402 TCAGAAGAGATGCTCGAGTCCCAGGTTGACCAACGAGTTCTGGAGGAGTTACTTCGAGAG 1461
Query 1165 AGATTTCCAAAATTGGTTCATCATCTAGATTATCTTGGAGTCCAGGTGGCTTGTGTTACA 1224
|||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1462 AGATTTCCTAAATTGGTTCATCATCTAGATTATCTTGGAGTGCAGGTGGCTTGCGTTACA 1521
Query 1225 GGGCCATGGTTTCTTTCCATCTTCATTAATATGCTTCCATGGGAAAGTGTTCTCAGAGTG 1284
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1522 GGGCCATGGTTTCTTACCATCTTCATTAATATGCTTCCATGGGAAAGTGTTCTCAGAGTG 1581
Query 1285 TGGGATGTGCTTCTATTTGAAGGAAATCGTGTTATGCTTTTCAGAACAGCACTTGCATTG 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1582 TGGGATGTGCTTCTATTTGAAGGAAATCGTGTTATGCTTTTCAGAACAGCACTCGCATTG 1641
Query 1345 ATGGAATTTTATGGTCCTGCATTGGTTACAACCAAGGACACTGGCGATGCTGTTACTTTG 1404
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 1642 ATGGAATTTTATGGTCCTGCATTGGTTACAACCAAGGACATTGGAGATGCTGTTACTTTG 1701
Query 1405 CTACAATCAATGACTGGTTCAACATTTGATAGCAGCCAGCTCGTTTTCACTGCTTGCATG 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 CTACAATCAATGACTGGTTCAACATTTGATAGCAGCCAGCTCGTTTTCACTGCTTGCATG 1761
Query 1465 GGTTACCAGAGTGTACATGAAAGTAGATTGCAGGAATTAAGAAGCAAACACAGGCCAGCA 1524
|||||||| | |||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 1762 GGTTACCAAAATGTACATGAAAGTAAATTGCAGGAACTAAGAAGCAAACACAGGCCAGCA 1821
Query 1525 GTAATAGCTGCATTTGAGGAAAGATTAAAGGGGCTTCAAGCTTGGAGGGATTCAAAAGGC 1584
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 1822 GTAATAGCTGCATTTGAGGAAAGATTAAAGGGTCTTCAAGCTTGGAGGGATTCAAAAGAC 1881
Query 1585 CCTGCGACCAAATTACATAATTCTAAGCAAGACCCAAATTCTGTTTTAGCTAGCAAAGCC 1644
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1882 ACTGCAACCAAATTACATAATTCCAAGCAAGACCCAAATTCTGTTTTAGCTAGCAAAGCC 1941
Query 1645 TCATCATCAAATGGGAGTTTATCTCGTTCTGAATCGGGATCCAGTTATGCAGACGACGTC 1704
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1942 TCATTGTCAAATGGGAGTTTATCTCGTTCTGAATCGGGATCCAGTTATGCAGACGACATC 2001
Query 1705 TTTATTAGCCTGACTGGGGATGGTGAGATAGAT-TGTTTTCAAGATCATCAAGGACAGGT 1763
||||||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||
Sbjct 2002 TTTATTAGCCTGACTGGGGATTGTGAGATAGATAT-TTTTCAAGATCTTCAAGGACAGG- 2059
Query 1764 TCTCTGGTTGAAGGGTGAATTCCACAAGTTGCTTGAGGAGAAAAGATCCGCTTTACTAAG 1823
| | ||| | ||||||||||||| ||||||||||||| |||||||||||
Sbjct 2060 -----G-T-GAAC--T-----CCACAAGTTGCTTCAGGAGAAAAGATCTGCTTTACTAAG 2105
Query 1824 AGCTGAAGAGTTGGAGATAGCTCTCATGGAGATGGTCAAACAAGATAATCGACGTCAACT 1883
|||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2106 AGCTGAAGAGTTGGAGGTAGCTCTCATGGAGATGGTCAAACAAGACAATCGGCGTCAACT 2165
Query 1884 GAAGGCTAAGATTGAGCAGTTAGAGAAAGAGGTGACAGAGCTTCGAAGACTTGTTTCTGA 1943
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 2166 TAAGGCTAAGATTGAGCAGTTAGAGCAAGGGGTGACAGAGCTTCGAAGACTTGTTTCTGA 2225
Query 1944 TAAGAGGGAACAAGAAGGTGCTATGATACAGATCTTGATGCGGATGGAGCAAGAACATAA 2003
||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2226 TAAGAGGGAGCAAGAAAGTGCTATGATACAGGTCTTGATGCGGATGGAGCAAGAACATAA 2285
Query 2004 AGTAACAGAAGATGCACGGAGACTTGCTGAGCAGGATGCAGCAGCACAGAGATATGCTGC 2063
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 2286 AGTAACAGAAGATGCACGGAGACTTGCTGAGCAGGATGCAGCAACGCAGAGATATGCTGC 2345
Query 2064 TGAAGTACTTCAGGAAAAGTATGAAGAAGCTGTTGCAGCGCTCGCTGAGATGGAGGAGAG 2123
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct 2346 TGAAGTGCTTCAGGAAAAGTATGAAGAGGCTGTTGCAGCTCTCGCGGAGATGGAGGAGAG 2405
Query 2124 GGCAGTAATGGCAGAGTCCATGTTGGAGGCGACTTTGCAGTATCAATCTGGCCAAGTTAA 2183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2406 GGCAGTTATGGCAGAGTCCATGTTGGAGGCGACTTTGCAGTATCAATCTGGCCAAGTTAA 2465
Query 2184 AGCACAACCTTCACCACGGCAACTGAAGCAAGATTTGCCGGTTATGGTCAGTCCCTAGAA 2243
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2466 AGCACAACCTTCACCACGGCAACTGAAGCAAGATTTGCCGGTCATGGTCAGTCCCTAGAA 2525
Query 2244 TCTTATCCAAGTCAGACTACATATGATAA-ACCTAAGGAGCAAGTTAATGACG-GAAGTC 2301
|||||||||| ||||||||||||| || |||||||||||||||||| |||| ||||||
Sbjct 2526 TCTTATCCAAA--AGACTACATATGA-AAGACCTAAGGAGCAAGTTAACGACGAGAAGTC 2582
Query 2302 ATCAACAGAAGGACAAAACACAAACTTCATAGCAGAAGGACACAAAGCTCTAAGAAACTG 2361
||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| |
Sbjct 2583 ATCAACAGAAGGACAAA-CACAAACTTCATAGCAGAAGAACACGAAGCTCTAAGA--C-- 2637
Query 2362 CGACACTCCCTAAGGTATATAATTATACAAATCGCCGATTAGATTGTCGACATAACTAGT 2421
||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 2638 --ACACTCCGTAAGGTATATAATTATACAAATTGCCGATTAGATTGTCGAGATAACTAGT 2695
Query 2422 AGATAT-T-GAATTACATAAtttttttGGTAAGCATATAGAAACAATTCGTTGTAAGTCA 2479
|||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 2696 AGATATATTGAATTACATAATTTCTTTGGTAAGCATATATAAACAATTCGTTGTAAGTCA 2755
Query 2480 AACCTCTGTTTGTATGACAAAGAGTTTTCAACT 2512
|||||||||| ||||||||||||||||||||
Sbjct 2756 AACCTCTGTT---ATGACAAAGAGTTTTCAACT 2785
> AT3G55020.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr3:20388869-20394911 REVERSE LENGTH=2941
Length=2941
Score = 1934 bits (1047), Expect = 0.0
Identities = 1837/2214 (83%), Gaps = 72/2214 (3%)
Strand=Plus/Plus
Query 27 TGACCACAAAAGGGATGCATATGGATTTTCTGTGAGGCCTCAGCATGTGCAAAGATACCG 86
||| ||||| ||||||||||| |||||| |||| || ||||| |||||||| |||||| |
Sbjct 270 TGAGCACAAGAGGGATGCATACGGATTTCCTGTCAGACCTCAACATGTGCAGAGATACAG 329
Query 87 AGAATATGTTGATATCTACAAGGAGGAGGAAGAGGAGAGGTCAGCCAGGTGGAACAATTT 146
|||||||| |||||| |||||||| || ||||| || ||||| | |||||||| || |||
Sbjct 330 AGAATATGCTGATATTTACAAGGAAGAAGAAGAAGAAAGGTCGGACAGGTGGAGCAGTTT 389
Query 147 CCTGGAAGTTCATGCAGAAT---CTG-G---CGTGA-ATA--GATCGTCTGAAAATAATC 196
| |||||| ||||| |||| ||| | | | | | | |||| |||||||||| ||
Sbjct 390 CTTGGAAGATCATGTTGAATCGACTGAGTTACCT-ACAAACGGATCTTCTGAAAATATTC 448
Query 197 ATGTA-CATCCAATTGAGAGTGACaagaaaaaagaagaggaatcaaacaagggtg-ctga 254
| | | | | | ||| ||||| ||| |||||||| | |||| ||||||||| | |||
Sbjct 449 ACGCACCGT-TTAGTGAAAGTGAGAAGGAAAAAGAAAAAGAATTAAACAAGGG-GCCTG- 505
Query 255 aagaaaagatctag-aaactgaaaagCCAAGTTCTGATTTAACTCCTGGGAATGCGAGAG 313
| ||||||| | | ||||| ||| | |||||||| ||||||||| ||||| || |
Sbjct 506 --GTGAAGATCT-GCATACTGACAAGTTAGGTTCTGATGTAACTCCTGATAATGCCAGTG 562
Query 314 AGGAAGATGAAGTTCCCAG-TGCAGCGAAGAATGTGCACAAATTTCAGTTATGGGCTGAG 372
| ||||| | | ||| | ||||| ||||||||| |||| | | || |||||| |||||
Sbjct 563 AAGAAGAAGGA-CACCCCGATGCAGAGAAGAATGTTCACAGAGTGCAATTATGGACTGAG 621
Query 373 ATCAGACCATCTCTT-CAAGCAATTGAGGACTTGATGAGTGCCCGTGTCAA-AATGAAGG 430
|||||||| ||| || | | ||||||| ||||||||||| ||||||||| || |||||
Sbjct 622 ATCAGACCGTCT-TTACGATCAATTGAAGACTTGATGAGCATCCGTGTCAAGAA-GAAGG 679
Query 431 GGGATTCCA-CAAATGGCGAGCAAGAAGCGCAGAAATTG-A-ATTCCTTACCCTCAACTG 487
|||||| | |||| |||||||||| || | ||| || | ||| | ||| ||| ||
Sbjct 680 GGGATT-TATCAAAAAGCGAGCAAGAGGCTCCGAAGGTGAAGATT--TCACCTTCATTTG 736
Query 488 ATGA-GACCAAATCTTCAAAGGGTGTGTCTGAGAATGATTCTGAAGACGAGTTCTATGAT 546
|||| | |||||||||| ||||| | ||||| | |||||||||||||||||||||||||
Sbjct 737 ATGATG-CCAAATCTTCCAAGGGAGCATCTGATATTGATTCTGAAGACGAGTTCTATGAT 795
Query 547 GTGGAGAGATCAGATCCAATTCAGGATGG---TTCTTCAGATGGTGCAAGTGTCTCCAGC 603
|| ||||| || ||| |||||||||| ||||||||||||| || ||||||| |
Sbjct 796 GTTGAGAGGTCCGAT---GTTCAGGATGGTTCTTCTTCAGATGGTACAGGTGTCTCTGGT 852
Query 604 ATGTCTGCTGCTGCTGACGCAACTTCTCTAGTATCTGCATGCCCCTGGAAAGACGAACTT 663
|| ||| ||||||||| |||| || | | | ||| |||| || ||||| || ||||||
Sbjct 853 ATCCCTGTTGCTGCTGATGCAA-GTC-C-ACTGTCTACATGTCCTTGGAAGGAAGAACTT 909
Query 664 GAAGTTCTTG-TTCATGGTGGGGCACCTATGGCTCTGAGGGGTGAGCTCTGGCAAGCATT 722
||||| | || ||| || || | |||||||||||||||||| ||| | |||||||||||
Sbjct 910 GAAGTGC-TGATTCGCGGCGGTGTACCTATGGCTCTGAGGGGAGAGTTATGGCAAGCATT 968
Query 723 TGCGGGAGTCAAGAAACGTCGGGT-CAAGAATTATTACCAAAATCTGCTAGCTGCTGATA 781
| ||| || | |||||| | | | |||| ||||||| ||||| || || || || |||
Sbjct 969 CGTGGGCGTGAGGAAACGAC-GATGCAAGGATTATTATCAAAACCTTCTTGCAGCAGATG 1027
Query 782 G-TCTAGGAAACGA-CATAGAGCAGGAGCACATGCAGCATGCAGATGAGAAAGGTTCAAG 839
| ||| | |||| | ||||||||| ||| | |||||||||| ||||| |||||||||||
Sbjct 1028 GTTCT-GTAAAC-ACCATAGAGCAAGAGGATATGCAGCATGTTGATGATAAAGGTTCAAG 1085
Query 840 TACAGACCCCCTCGCTGTCGTGCAAAAATGGAAAGGACAGATAGAAAAGGATTTACCCCG 899
|||||| | | ||||| ||| |||||||||||||||||||||||||||| ||||| ||
Sbjct 1086 TACAGAATCTATTGCTGTTGTGGAAAAATGGAAAGGACAGATAGAAAAGGACTTACCTCG 1145
Query 900 GACATTTCCAGGTCATCCTGCCCTAGATGATGAT-TTCAGAGATGCTCTGCGGCGATTGC 958
||||||||| ||||||||||| |||||||||||| | ||| ||||||| ||||| ||||
Sbjct 1146 GACATTTCCTGGTCATCCTGCTCTAGATGATGATGGT-AGAAATGCTCTACGGCGTTTGC 1204
Query 959 TAACTGCATATGCTAGGCATAATCCCTCTGTTGGATACTGTCAGGCAATGAATTTCTTCG 1018
| ||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||| |
Sbjct 1205 TTACTGCTTATGCTAGGCATAATCCTTCTGTAGGATACTGTCAGGCTATGAATTTCTTTG 1264
Query 1019 CTGCACTTTTATTACTTCTGATGCCCGAAGAGAATGCTTTTTGGTCGCTTATAGGAATCA 1078
|||| |||||||| ||| ||||||| ||||| ||||| |||||| | || |||||| |||
Sbjct 1265 CTGCGCTTTTATTGCTTTTGATGCCAGAAGAAAATGCCTTTTGGGCACTGATAGGACTCA 1324
Query 1079 TTGATGACTACTTCCATGATTATTATTCAGAAGAGATGATCGAGTCCCAGGTTGACCAAC 1138
|||||||||||||| ||| ||||||||||||||| ||||| ||||| |||||||| ||||
Sbjct 1325 TTGATGACTACTTCAATGGTTATTATTCAGAAGAAATGATAGAGTCTCAGGTTGATCAAC 1384
Query 1139 AAGTTCTGGAGGAGTT-GCTTCGAGAGAGATTTCCAAAATTGGTTCATCATCTAGATTAT 1197
||||||||||||||| | ||||||| |||||||| ||||||||||||||||| ||||||
Sbjct 1385 TAGTTCTGGAGGAGTTAG-TTCGAGAAAGATTTCCTAAATTGGTTCATCATCTGGATTAT 1443
Query 1198 CTTGGAGTCCAGGTGGCTTGTGTTACAGGGCCATGGTTTCTTTCCATCTTCATTAATATG 1257
|||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1444 CTTGGAGTGCAAGTGGCTTGGGTTACAGGGCCATGGTTTCTTTCCATCTTCATGAATATG 1503
Query 1258 CTTCCATGGGAAAGTGTTCTCAGAGTGTGGGATGTGCTTCTATTTGAAGGAAATCGTGTT 1317
|||||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||
Sbjct 1504 CTTCCATGGGAAAGTGTTCTTAGAGTCTGGGATGTGCTTCTCTTTGAAGGAACTCGTGTT 1563
Query 1318 ATGCTTTTCAGAACAGCACTTGCATTGATGGAATTTTATGGTCCTGCATTGGTTACAACC 1377
|||||||||||||||||||| |||||||||||| | |||||||||||||| ||||| ||
Sbjct 1564 ATGCTTTTCAGAACAGCACTCGCATTGATGGAACTATATGGTCCTGCATTAGTTACTACG 1623
Query 1378 AAGGACACTGGCGATGCTGTTACTTTGCTACAATCAATGACTGGTTCAACATTTGATAGC 1437
||||| |||| || ||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 1624 AAGGATGCTGGAGACGCTGTTACTTTGCTACAATCACTGACTGGATCAACATTTGATAGC 1683
Query 1438 AGCCAGCTCGTTTTCACTGCTTGCATGGGTTACCAGAGTGTACATGAAAGTAGATTGCAG 1497
|||||||| ||||| |||||||||||||||||||| | ||||||||||| |||||||||
Sbjct 1684 AGCCAGCTAGTTTTAACTGCTTGCATGGGTTACCAAAATGTACATGAAATTAGATTGCAA 1743
Query 1498 GAATTAAGAAGCAAACACAGGCCAGCAGTAATAGCTGCATTTGAGGAAAGATTAAAGGGG 1557
||||| ||||||| || |||||||| || || |||||| |||||||||| | |||||||
Sbjct 1744 GAATTGCGAAGCAAGCATAGGCCAGCTGTGATCGCTGCACTTGAGGAAAGGTCAAAGGGG 1803
Query 1558 CTTCAAGCTTGGAGGGATTCAAAAGGCCCTGCGACCAAATTACATAATTCTAAGCAAGAC 1617
|||||||| ||||| ||||| || || | ||| |||||||| |||||| ||||||||||
Sbjct 1804 CTTCAAGCGTGGAGAGATTCTAAGGGACTTGCCTCCAAATTATATAATTTTAAGCAAGAC 1863
Query 1618 CCAAATTCTGTTTTAGC---TAGCAAAGCCTCATCATCAAATGGGAGTTTATCTCGTTCT 1674
||||| |||||||| | |||||||||||||| |||||||||||||| ||||| |||
Sbjct 1864 CCAAAATCTGTTTTGGTGGATAGCAAAGCCTCATTGTCAAATGGGAGTTTGTCTCGATCT 1923
Query 1675 GAATCGGGATCCAGTTATGCAGACGACGTCTTTATTAGCCTGACTGGGGATGGTGAGATA 1734
|| || ||||| ||| ||||||| || || || ||||||| ||||||||||| ||| ||
Sbjct 1924 GAGTCAGGATCAAGTAATGCAGATGAAGTGTTGGTTAGCCTAACTGGGGATGGGGAGGTA 1983
Query 1735 GATTGTTTTCAAGATCATCAAG-GACAGGTTCTCTGGTTGAAGGGTGAATTCCACAAGTT 1793
|||| | ||||||||| ||||| | |||||||| |||||||||| |||| || ||||||
Sbjct 1984 GATTCTGTTCAAGATCTTCAAGCG-CAGGTTCTGTGGTTGAAGGCTGAACTCTGCAAGTT 2042
Query 1794 GCTTGAGGAGAAAAGATCCGCTTTACTAAGAGCTGAAGAGTTGGAGATAGCTCTCATGGA 1853
||||||||||||| |||| ||| |||| ||||||||||| |||||||| |||||||||||
Sbjct 2043 GCTTGAGGAGAAACGATCAGCTCTACTTAGAGCTGAAGAATTGGAGATTGCTCTCATGGA 2102
Query 1854 GATGGTCAAAC-AAGATAATCGACGTCAACTGAAG-GCTAAGATTGAGCAGTTAGAGAAA 1911
||| || ||| |||| ||||| |||||| ||| | || ||| | || ||||||||| ||
Sbjct 2103 GATAGT-AAAGGAAGACAATCGGCGTCAATTGA-GTGCCAAGGTCGAACAGTTAGAGCAA 2160
Query 1912 GAGGTGACAGA-GCTTC-GAAGACTTGTTTCTGATAAG-AGGGAACAAGAAGGTGCTATG 1968
|| || | || | ||| || |||| | ||||||||| ||| ||||||||||||| |||
Sbjct 2161 GAAATGGCCGAAG-TTCAGA-GACTCCTCTCTGATAAGCAGG-AACAAGAAGGTGCAATG 2217
Query 1969 ATACAGATCTTGATGCGGATGGAGCAAGAACATAAAGTAACAGAAGATGCACGGAGACTT 2028
||||| ||||||||||| ||||||||||||| || ||||||||||||||||| | | ||
Sbjct 2218 CTACAGGTCTTGATGCGGGTGGAGCAAGAACAGAAGGTAACAGAAGATGCACGAATATTT 2277
Query 2029 GCTGAGCAGGATGCAGCAGCACAGAGATATGCTGCTGAAGTACTT-CAGGAAAAGTATGA 2087
|||||||||||||||| ||| ||||||||||||||| |||| ||| |||||||| || ||
Sbjct 2278 GCTGAGCAGGATGCAGAAGCGCAGAGATATGCTGCTCAAGT-CTTGCAGGAAAAATACGA 2336
Query 2088 AGAAGCTGTTGCAGCGCTCGCTGAGATGGAGGAGAGGGCAGTAATGGCAGAGTCCATGTT 2147
||||||||||| || || ||||| |||||| |||| ||||| ||||||||||||||| |
Sbjct 2337 GGAAGCTGTTGCTGCACTGGCTGAAATGGAGAAGAGAGCAGTGATGGCAGAGTCCATGCT 2396
Query 2148 GGAGGCGACTTTGCAGTATCAATCTGGCCAAGTTAAAGCACAACCTTCACCACG 2201
||||| |||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 2397 CGAGGCAACTTTGCAGTATCAATCTGGCCAACTCAAAGCACAACCTTCACCACG 2450
> AT2G39270.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16399972-16401671
FORWARD LENGTH=1162
Length=1162
Score = 132 bits (71), Expect = 2e-29
Identities = 83/88 (94%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 2425 TATTGAATTACATAAtttttttGGTAAGCATATAGAAACAATTCGTTGTAAGTCAAACCT 2484
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 1162 TATTGAATTACATAATTTCTTTGGTAAGCATATATAAACAATTCGTTGTAAGTCAAACCT 1103
Query 2485 CTGTTTGTATGACAAAGAGTTTTCAACT 2512
||||| ||||||||||||||||||||
Sbjct 1102 CTGTT---ATGACAAAGAGTTTTCAACT 1078
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124664853355
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5