BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482953
Length=1593
Score E
Sequences producing significant alignments: (Bits) Value
AT2G39330.1 | Symbols: JAL23 | jacalin-related lectin 23 | chr2... 2331 0.0
AT2G39310.1 | Symbols: JAL22 | jacalin-related lectin 22 | chr2... 1471 0.0
> AT2G39330.1 | Symbols: JAL23 | jacalin-related lectin 23 | chr2:16419596-16421852
REVERSE LENGTH=1619
Length=1619
Score = 2331 bits (1262), Expect = 0.0
Identities = 1503/1615 (93%), Gaps = 34/1615 (2%)
Strand=Plus/Plus
Query 1 AGATCAAGAATTTACAGAGTATTTG--AAACTTCAAAATGGCGAAAATCTACCGGAAGTT 58
||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||
Sbjct 14 AGATCAAGAATTTAC--AGTATTTGAAAAAATACAAAATGGCGAAAATCTACCGGAAGTT 71
Query 59 GACACGCTACGGTGGTGAAGGAGGGCGTGAATGGGACGATGATGTATATGAGGGTGTAAG 118
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 GACAGGCTACGGTGGTGAAGGAGGGCGTGAATGGGACGATGATGTATATGAGGGTGTAAG 131
Query 119 AAAAGTGTATGTAGGACAAGATATCAATCGTATCACTTACGTCAAATTCGAGTATGTGAA 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 AAAAGTGTATGTAGGACAAGATATCAATCGTATCACTTACGTCAAATTCGAGTATGTGAA 191
Query 179 GGAAGACGGCAAAGTAGTAACAAGTGAATATGGGACAATAAATCAACAACCCAAAGAGTT 238
|||||||||| |||| ||||||| ||||||||||| ||| | ||||||||||||||||||
Sbjct 192 GGAAGACGGCCAAGTCGTAACAACTGAATATGGGAAAATCATTCAACAACCCAAAGAGTT 251
Query 239 TGTACTTCAATATCCGGACGAACACATCATAGCGGTGGAAGGAAACTACCGCGGAGTGGC 298
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 252 TGTACTTCAATATCCGGACGAACATATCATAGCGGTGGAAGGAAACTATCGCGGAGTGGC 311
Query 299 TCTATGTGCCACGGAGGTGATCACAAATCTCGTCTTCAAGACCTCAAAGGGTAGAAAGTC 358
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 312 TCTATGTGCCACAGAGGTGATCACAAACCTCGTCTTCAAGACCTCAAAGGGTAGAAAGTC 371
Query 359 TCCATTGTTTGGTCCAAATTTGCTTGGAATTACGACCGGTACAAAGTTTGTTATTGAGGA 418
||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 372 ACCACTGTTTGGTCCAAACTTGCTTGGAATTACGACCGGTACAAAGTTCGTTATTGAGGA 431
Query 419 TGGGGGAAAGAAGATCGTAGGGTTTCATGGACGGTCGGGTAATGCTCTAGACGCGCTTGG 478
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 432 TGGAGGAAAGAAGATCGTAGGGTTTCATGGACGGTCGGGTAATGCTCTCGACGCGCTTGG 491
Query 479 AGTTTACTTTGTACATGGCTCTCTAACCACGTCTCCGCCTGTTTACAAGCTGGATGCGCA 538
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 492 AGTTTACTTTGTACATGGCTCTCTAACAACGTCTCCGCCTGTTTACAAGCTGGATGCCCA 551
Query 539 AGGTGGTCCAGG-GGGACGTGTTTGGGATGATGGTTCTTACGACGGCGTTAAATCGCTGC 597
||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 552 AGGTGGTACAGACGGG-CGTGTTTGGGATGATGGTTCTTACGACGGCGTTAAATCGCTGC 610
Query 598 GTATTGGTCAAGATAATTCTCGTATAACTTATTTAGAGTTTGAGTACGAGAAAGGCGGTA 657
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 611 GTATTGGTCAAGATAATTCTCGTATTACTTATTTAGAGTTCGAGTACGAGAAAGGCGGTA 670
Query 658 AGTTAGAGACACGTCACCATGGGGTGAAACAAGAAAGATCGCTGAAGTTTGAGCTTAACC 717
||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 671 AGTTAGAGACATGTCGCCATGGGGTGAAACAAGAAAGATCACTGAAGTTTGAGCTTAACC 730
Query 718 CGAATGAATACATTAAATCGGTGGAAGCAACCTATGATAAACCAGAC-TTCTTCCGAAAT 776
|| |||||||||| ||||||||||||||||||||||||||||| ||| || ||||| |||
Sbjct 731 CGGATGAATACATCAAATCGGTGGAAGCAACCTATGATAAACCGGACATT-TTCCGCAAT 789
Query 777 GTCGTCATTACATCGCTTTCATTTGAAACATCGAAGGGGAAAACATCATTCTCTGGATAT 836
|||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| |||
Sbjct 790 GTCGTCATTACATCGCTTACATTTGAAACATCGAAGGGGAGAACGTCATTCTCTGGGTAT 849
Query 837 AAGGGTGGTAAGAAGTTTAAGCTAGAGCAGAAGGGTCGCAGACTTGTCGGGTTCCATGGA 896
||||| ||||||||||||||||||||||| |||||||| || ||||||||||||||||||
Sbjct 850 AAGGGAGGTAAGAAGTTTAAGCTAGAGCAAAAGGGTCGTAGGCTTGTCGGGTTCCATGGA 909
Query 897 AAGGAAGGTTCAGCTATTGATGCTCTTGGAGCATATTTTGCACCTGTTCCTACACCGACT 956
||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||
Sbjct 910 AAGGAAGGTTCAGCTATTGATGCCCTTGGAGCATATTTTGCACCTATTCCTACTCCGACT 969
Query 957 CCTATAATTCCAGCCAAGAAACTACCAGCAGTAGGCGGCAACGGAGGAGTTGCATGGGAT 1016
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 970 CCTATAATTCCAGCCAAGAAACTACCAGCAATAGGCGGCAGCGGAGGAGTTGCATGGGAT 1029
Query 1017 GATGGTGTCTACGACGGTGTGAGGAGGATACTTGTAGGACAAGGAAACGATGGTGTAGCC 1076
|||||||||||||| ||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct 1030 GATGGTGTCTACGATGGTGTAAGGAAGATACTTGTAGGACAAGGTAACGATGGTGTAGCC 1089
Query 1077 TTTGTCAAGTTTGAGTACAATAAAGGAAAAGATGTTGTATCCGGAGAGGACCATGGGAAG 1136
|||||||||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||
Sbjct 1090 TTTGTCAAGTTTGAATACAATAAAGGAAAAGATCTTGTATCTGGAGATGACCATGGGAAG 1149
Query 1137 ATGACATTACTCGGAACTGAAGAGTTTGTGCTTGAAGATGGTGAATATCTAATGGCCATA 1196
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1150 ATGACATTACTCGGAACTGAAGAGTTTGTGCTTGAAGATGGTGAATATCTCACGGCCATA 1209
Query 1197 GATGGTTACTACGATAAGATTTTCGGAGTCGAGACACCGATGATAATTTGTCTTCAGTTT 1256
||||| || ||||||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct 1210 GATGGCTATTACGATAAGATTTTCGGAGTCGAGACACCAATGATTATCTGTCTTCAGTTT 1269
Query 1257 AAGACGAACAAAAGGGAGTCAACTCCGTTTGGAATGGATTCCGGTGAGAAGTTCTCACTC 1316
|||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct 1270 AAGACGAACAAAAGGGAGTCAACTCCATTCGGAATGGATTCGGGTGAGAAGTTCTCGCTT 1329
Query 1317 GGAGAGATAGGCCACAAGATCGTCGGATGCCACGGACAAGCTAGTGATGTTGTTCACAGC 1376
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1330 GGAGAGAAAGGCCACAAGATCGTCGGATTCCACGGACAAGCTAGTGATGTTGTTCACAGC 1389
Query 1377 ATCGGAGTCACTGTCGTGCCAATCACCA-CAACCAAGTGAAAAACGAACCTTCTATTATA 1435
|||||||||||||||||||| || |||| || ||||||||||||| | || |||||||
Sbjct 1390 ATCGGAGTCACTGTCGTGCCCATTACCAACA-CCAAGTGAAAAAC---CTTT-TATTATA 1444
Query 1436 TTAGTAAAACCAGCCACTGTCATGTCGACAAAAT-AAA-C-TTCCAATAAGGATTGGTGT 1492
| |||||||||||||| || ||||||||| |||| ||| | ||| |||||||||||||||
Sbjct 1445 TAAGTAAAACCAGCCAGTGCCATGTCGACTAAATGAAAACATTC-AATAAGGATTGGTGT 1503
Query 1493 GTTT--T-TA-T------G-TGT-TT-GTAAGTTACTGTTTCTGTCAAATGTGGCCAATA 1539
|||| | || | | ||| || |||| |||||||||||||||||| || ||||||
Sbjct 1504 GTTTACTCTACTACTTTTGATGTGTTTGTAACTTACTGTTTCTGTCAAATATGTCCAATA 1563
Query 1540 AGA-TTGGTGTGTGCTCTCTTCAACCATTCAATAAATCTACCATGAGCCGTGTCA 1593
||| |||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1564 AGAATTGGTGTG--CTCTCTTCAACTATTCAATAAATCTACCATGAGCCGTGTCA 1616
> AT2G39310.1 | Symbols: JAL22 | jacalin-related lectin 22 | chr2:16414073-16416815
REVERSE LENGTH=1610
Length=1610
Score = 1471 bits (796), Expect = 0.0
Identities = 1214/1411 (86%), Gaps = 47/1411 (3%)
Strand=Plus/Plus
Query 30 TTCAAAATGGCGAAAATCTACCGGAAGTTGACACGCTACGGTGGTGAAGGAGGGCGTGAA 89
||| |||||||||| || |||||||||||| ||| || ||||||||| ||||| | |||
Sbjct 39 TTCGAAATGGCGAAGATGTACCGGAAGTTGGCACTCTGCGGTGGTGAGGGAGGACAAGAA 98
Query 90 TGGGACGATGATGTATATGAGGGTGTAAGAAAAGTGTATGTAGGACAAGATATCAATCGT 149
|||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||
Sbjct 99 TGGGACGACGATGTATATGAGGGTGTAAGAAAAGTGTATGTAGGGCAAGATCTCAACCGT 158
Query 150 ATCACTTACGTCAAATTCGAGTATGTGAAGGAAGACGGCAAAGTAGTAACAAGTGAATAT 209
||||||||| |||| || ||||| ||| ||||||||||| |||||||||||| |||||||
Sbjct 159 ATCACTTACATCAAGTTTGAGTACGTGCAGGAAGACGGCGAAGTAGTAACAACTGAATAT 218
Query 210 GGGACAATAAATCAACAACCC-AAAGAGTTTGTACTTCAATATCCGGACGAACACATCAT 268
||||||| |||||| | |||| |||||||||||| ||||||| |||||||||||||||||
Sbjct 219 GGGACAACAAATCAGC-ACCCTAAAGAGTTTGTAATTCAATACCCGGACGAACACATCAT 277
Query 269 AGCGGTGGAAGGAAACTACCGCGGAGTGGCTCT-ATGTGCCACGGAGGTGATCACAAATC 327
||| ||||| |||| |||| | ||||||||| || |||||| |||||||| || |
Sbjct 278 AGCAGTGGAGGGAAGTTACCACCAAGTGGCTCTCAT-TGCCACAGAGGTGATTACGTCCC 336
Query 328 TCGTCTTCAAGACCTCAAAGGGTAGAAAGTCTCCATTGTTTGGTCCAAATTTGCTTGGAA 387
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 337 TCGTCTTCAAGACCTCAAAGGGTAGAAAGTCTCCATTGTTTGGTCCAAACTTACTTGGAA 396
Query 388 TTACGACCGGTACAAAGTTTGTTATTGAGGATGGGGGAAAGAAGATCGTAGGGTTTCATG 447
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 397 TTACGACCGGTACAAAGTTTGTTTTTGAGGATGAGGGAAAGAAGATCGTAGGGTTTCATG 456
Query 448 GACGGTCGGGTAATGCTCTAGACGCGCTTGGAGTTTACTTTGTACATGGCTCTCTAACCA 507
||||| | ||| ||||| | ||||| |||||||||||||||||| ||| | ||||
Sbjct 457 GACGGGCAGGTGATGCTGTCGACGCTCTTGGAGTTTACTTTGTA-TTGG----AT-ACCA 510
Query 508 CGTC-TCCGCCTGTTTACAAGCTGGATGCGCAAGGTGGTCCAG-GGGGACGTGTTTGGGA 565
|| | | | ||| |||||||||| ||||| ||||||||| ||| ||| |||||||||||
Sbjct 511 CGCCGTTC-CCTCTTTACAAGCTTGATGCCCAAGGTGGTACAGACGGG-CGTGTTTGGGA 568
Query 566 TGATGGTTCTTACGACGGCGTTAAATCGCTGCGTATTGGTCAAGATAATTCTCGTATAAC 625
||||||||||||||| ||| ||||| |||||||||||| |||||||||||||||||| ||
Sbjct 569 TGATGGTTCTTACGATGGCATTAAAACGCTGCGTATTGATCAAGATAATTCTCGTATCAC 628
Query 626 TTATTTAGAGTTTGAGTACGAGAAAGGC-GGTAAGTTAGAGACACGTCACCATGGGGTGA 684
|||||||||| ||||||||||||||| | || ||| | | ||| || ||||||||| ||
Sbjct 629 TTATTTAGAGGTTGAGTACGAGAAAGACGGGGAAG-CAAAAACATGTAACCATGGGGGGA 687
Query 685 AACAAGA-A-A-GATCGCTGAAGTTTGAGC-T--TAACCCGA-ATGAATACATTAAATCG 737
|| ||| | | ||| | | |||||| || | | |||| | |||||||||| ||||||
Sbjct 688 AAGGAGATACACCATC-C-G-AGTTTGTGCTTGGTTACCC-AGATGAATACATCAAATCG 743
Query 738 GTGGAAGCAACCTATGATAAACCAGAC-TTCTTCCGAAATGTCGTC-ATTACATCGCTTT 795
||||||||||||||| | || ||| || || || | ||| || | ||||| || | ||
Sbjct 744 GTGGAAGCAACCTATCAGAAGCCAAACATT-TTTAGCAAT-ACGGCAATTACGTCAC-TT 800
Query 796 CA-TT-TGAAACATCGAAGGGGAAAACATCATTCTCTGGATATAAGGGT-GGTAAGAAGT 852
| || | |||||| ||||||| ||||||||||| ||| ||||| || ||||||||||
Sbjct 801 AAGTTCT-TAACATCAAAGGGGAGAACATCATTCTTTGGGTATAA-TGTGGGTAAGAAGT 858
Query 853 TTAAGCTAGAGCAGAAGGGTCGCAGACTTGTCGGGTTCCATGGAAAGGAAGGTTCAGCTA 912
|| | | ||||| ||||||| || ||||||||||||||||||||||||| | ||||||
Sbjct 859 TTGTGTTGGAGCAAAAGGGTCATAGGCTTGTCGGGTTCCATGGAAAGGAAGATGCAGCTA 918
Query 913 TTGATGCTCTTGGAGCATATTTTGCACCTGTTCCTACACCGACT-CCTATAATTCCAGCC 971
|||||||||||||||||||||||| |||||||||||| || ||| ||| | |||||| |
Sbjct 919 TTGATGCTCTTGGAGCATATTTTGGACCTGTTCCTACTCCTACTCCCT-TGATTCCATCT 977
Query 972 AAGAAACTACCAGCAG-TAGGCGGCAACGGAGGAGTTGCATGGGATGATGGTGTCTACGA 1030
|||||||||||||| | |||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 978 AAGAAACTACCAGC-GATAGGCGGCAACGAAGGAGTTACATGGGATGATGGTGTCTACGA 1036
Query 1031 CGGTGTGAGGAGGATACTTGTAGGACAAGGAAACGATGGTGTAGCCTTTGTCAAGTTTGA 1090
|||||| |||| |||||||||||||||||| |||||||||||| |||||||||| |||||
Sbjct 1037 CGGTGTAAGGAAGATACTTGTAGGACAAGGTAACGATGGTGTATCCTTTGTCAAATTTGA 1096
Query 1091 GTACAATAAAGGAAAAGATGTTGTATCCGGAGAGGACCATGGGAAGATGACATTACTCGG 1150
||||| ||| || ||||| ||||| ||||||| ||||||||||||| ||||||||||||
Sbjct 1097 GTACAGTAAGGGCAAAGACCTTGTACCCGGAGATGACCATGGGAAGAAGACATTACTCGG 1156
Query 1151 AACTGAAGAGTTTGTGCTTGAAGATGGTGAATATCTAATGGCCATAGATGGTTACTACGA 1210
| |||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||
Sbjct 1157 AGCTGAAGAGTTTGTGCTTGAAGATGGTGAATATCTCATGAACATAGATGGCTACTACGA 1216
Query 1211 TAAGATTTTCGGAGTCGA-GACACCGATGATAATTTGTCTTCAGTTTAAGACGAACAAAA 1269
|||||| |||||||| || || ||| || || | ||||||||||||||||| |||||||
Sbjct 1217 TAAGATCTTCGGAGTTGAGGA-ACCAATAATTGTATGTCTTCAGTTTAAGACCAACAAAA 1275
Query 1270 GGGAGTCAACT-CCGTTTGGAATGGATTCCGGTGAGAAGTTCTCACTCGGAGA-GATAGG 1327
||||||||| | ||||||||||||||||| ||| |||||||||| || ||||| || |||
Sbjct 1276 GGGAGTCAA-TGCCGTTTGGAATGGATTCTGGTAAGAAGTTCTCGCTTGGAGAGGA-AGG 1333
Query 1328 CCACAAGATCGTCGGATGCCACGGACAAGCTAGTGATGTTGTTCACAGCATCGGAGTCAC 1387
|||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1334 CCACAAGATCGTTGGATTCCATGGACAAGCTAGTGATGTTGTTCACAGCATCGGAGTCAC 1393
Query 1388 TGTCGTGCCAATCACCACAACCAAGTGAAAA 1418
| ||||||| |||||||| ||| ||||||||
Sbjct 1394 TATCGTGCCCATCACCACCACCGAGTGAAAA 1424
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78664254015
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5