BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482955
Length=2439
Score E
Sequences producing significant alignments: (Bits) Value
AT2G39350.1 | Symbols: | ABC-2 type transporter family protein... 3624 0.0
AT3G55090.1 | Symbols: | ABC-2 type transporter family protein... 1607 0.0
AT5G13580.1 | Symbols: | ABC-2 type transporter family protein... 381 2e-104
AT2G37360.1 | Symbols: | ABC-2 type transporter family protein... 344 2e-93
AT2G37362.1 | Symbols: | Potential natural antisense gene, loc... 326 8e-88
> AT2G39350.1 | Symbols: | ABC-2 type transporter family protein
| chr2:16430085-16432557 REVERSE LENGTH=2473
Length=2473
Score = 3624 bits (1962), Expect = 0.0
Identities = 2262/2407 (94%), Gaps = 19/2407 (1%)
Strand=Plus/Plus
Query 41 tcttctttc-tcttcttcttcttctACAAC---A-GTTATGAGCGTGTTTTAAGACCGTT 95
||||| ||| |||||||||||||||| ||| | |||||||| |||||||||| |||||
Sbjct 62 TCTTC-TTCTTCTTCTTCTTCTTCTAGAACAGTACGTTATGAGAGTGTTTTAAGGCCGTT 120
Query 96 AATTTGTTAAATCACTCTTAAAAAGTTTTTCTTTTTGTTA-CTATGGCTCGTATTGTAGC 154
||||||||||||||||||| ||||||||||| | ||| || |||||||||||||||||||
Sbjct 121 AATTTGTTAAATCACTCTTTAAAAGTTTTTC-TATTG-TATCTATGGCTCGTATTGTAGC 178
Query 155 AGCTAATGATGATGATTCCATGGAGCTCAACGCCATCTCCTCTTTGCACGATTCAACTTT 214
||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||||||
Sbjct 179 AGCTAATGATGATGATTCCATGGAGCTAAACACCATCTCCTCTATACACGATTCAACTTT 238
Query 215 AGGGCAACTTCTGAAGAACGTCAGTGACGTTAGGAAAATGGCTATTGGAGACGAGACTCC 274
||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||
Sbjct 239 AGGGCAACTTCTGAAGAACGTTAGTGACGTCAGAAAAATGGCTATTGGAGACGAGACTCC 298
Query 275 AGTTCACGAGTCCTTAAACCAAGACTTCAACGATGGTTACATGCGTACTGTTCCATTTGT 334
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||
Sbjct 299 AGTTCACGAGTCCTTAAACCAAGACTACAACGATGGTTACATGCGTACAGTTCCATTCGT 358
Query 335 TCTCTCATTCGACAATCTCACATACAACGTATCTGTTCGTCGAAAGCTAGAGTTCCGCAA 394
|||||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||
Sbjct 359 TCTCTCATTCGACAATCTCACATACAACGTCTCTGTTCGTCCAAAACTAGACTTCCGCAA 418
Query 395 CCTCTTTCCACGGCGAAGAACAGAGGATCCTGAGATAGCTCAAACCGCGAGGCCAAAATC 454
||||||||||| | |||||||||||||| |||||||||||||| |||||||||||| |
Sbjct 419 TCTCTTTCCACGTAGGAGAACAGAGGATCCGGAGATAGCTCAAACGGCGAGGCCAAAAAC 478
Query 455 TAAAACCCTTCTCAATAACATCTCTGGCGAGACTCGAGATGGAGAGATCATGGCGGTTCT 514
|||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||
Sbjct 479 TAAAACCCTTCTCAATAATATCTCTGGCGAGACACGAGATGGAGAAATCATGGCTGTTCT 538
Query 515 CGGAGCTAGCGGTTCGGGGAAATCAACACTGATCGATGCATTAGCGAATCGGATTGCTAA 574
|| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 539 AGGCGCTAGCGGCTCGGGAAAATCAACACTGATCGATGCATTAGCGAATCGGATTGCCAA 598
Query 575 AGGAAGCTTGAAAGGAACAGTGAAGCTAAACGGAGAAACACTTCACTCTCGAATGCTCAA 634
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 599 AGGAAGCTTAAAAGGAACAGTGAAGCTAAACGGAGAAACACTTCAATCTCGAATGCTCAA 658
Query 635 AGTCATATCAGCCTACGTAATGCAAGATGATCTTCTCTTCCCTATGCTTACCGTTGAAGA 694
||| |||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct 659 AGTTATATCAGCTTACGTGATGCAAGATGACCTTCTCTTCCCAATGCTTACCGTTGAAGA 718
Query 695 AACACTAATGTTCGCTGCTGAGTTTCGTCTTCCGAGAAGTTTACCTAAATCTAAGAAGAA 754
||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 719 AACACTAATGTTCGCAGCTGAGTTTCGTCTCCCGAGAAGTTTACCTAAATCTAAAAAGAA 778
Query 755 GCTTCGTGTGCAAGCTTTGATTGATCAGTTAGGTATTAGAAACGCTGCTAAAACTATTAT 814
||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||
Sbjct 779 GCTTCGTGTGCAAGCTTTGATTGATCAACTAGGTATCAGAAACGCGGCTAAAACTATTAT 838
Query 815 CGGAGACGAAGGTCACCGAGGAATCTCCGGTGGTGAGAGAAGACGAGTTTCGATCGGAAT 874
||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||
Sbjct 839 AGGAGACGAAGGTCACCGTGGAATCTCCGGTGGTGAAAGAAGACGTGTTTCCATCGGAAT 898
Query 875 TGATATAATTCACGATCCAATTCTTCTCTTCCTCGATGAACCAACCTCTGGTTTGGATTC 934
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 899 TGATATAATTCACGATCCGATTCTTCTCTTCCTCGATGAACCAACCTCTGGTTTGGATTC 958
Query 935 AACGAGTGCTTTCATGGTGGTTAAAGTGTTGAAGAGGATTGCTCAGAGTGGCAGTATCGT 994
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 959 AACGAGTGCTTTCATGGTGGTTAAAGTATTGAAGAGGATTGCTCAGAGTGGTAGTATCGT 1018
Query 995 TATTATGTCGATTCATCAACCGAGTCATCGAGTTCTCGGTTTGCTTGACCGGTTAATCTT 1054
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1019 AATTATGTCGATTCATCAACCTAGTCATCGTGTTCTCGGTTTGCTTGACCGGTTAATCTT 1078
Query 1055 CTTGTCTCGTGGCCACACCGTGTACAGTGGATCTCCGGCGAGTCTTCCCCGTTTTTTCAC 1114
|||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1079 CTTGTCACGTGGCCACACCGTGTATAGTGGATCTCCGGCGAGTCTTCCACGTTTTTTCAC 1138
Query 1115 CGAATTCGGAAGTCCGATTCCGGAGAACGAGAATCGAACGGAGTTCGCGCTT-GATCTCA 1173
||||||||| |||||||| |||||||||||||||||||||||||| ||| || |||||||
Sbjct 1139 CGAATTCGGGAGTCCGATACCGGAGAACGAGAATCGAACGGAGTTTGCG-TTAGATCTCA 1197
Query 1174 TCCGTGAGCTTGAAGGATCCGCCGGAGGAACAAGAGGATTAGTCGAATTCAACAAAAAAT 1233
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 1198 TCCGTGAGCTTGAAGGATCCGCCGGAGGAACGAGAGGATTAATCGAATTCAACAAAAAAT 1257
Query 1234 GGCAAGAGATGAAGAAACATAACAACCGTCAACCACCATTGACTCCTCCTTCATCACCGT 1293
||||||||||||||||||| | ||| ||||||||||| |||||||| || ||||||||||
Sbjct 1258 GGCAAGAGATGAAGAAACAGAGCAATCGTCAACCACCGTTGACTCCACCGTCATCACCGT 1317
Query 1294 ACCCAAATCTAACACTAAAAGAAGCAATCGCCGCCAGTATCAGCCGAGGAAAGTTGGTTT 1353
|||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||
Sbjct 1318 ACCCAAATCTAACACTAAAAGAAGCAATCGCCGCAAGTATCAGCAGAGGAAAGCTAGTTT 1377
Query 1354 CCGGCGGTGAATCCGTCGCTCACGGCGGAACAACCACCAACACCACAACTCTAGCCGTAC 1413
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
Sbjct 1378 CCGGCGGTGAATCCGTCGCTCACGGCGGAGCAACCACCAACACCACAACCCTAGCCGTTC 1437
Query 1414 CTGCATTCGCGAATCCAATGTGGATCGAAATCAAAACTCTCTCGAAACGCTCAATGCTCA 1473
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1438 CTGCATTCGCGAATCCAATGTGGATCGAAATCAAAACTCTCTCGAAACGATCAATGCTCA 1497
Query 1474 ATTCGA-GAAGACAACCAGAGATATTCGGAATCAGAATCGCCTCCGTTGTTATCACCGGA 1532
|||| | |||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 1498 ATTC-ACGAAGACAACCAGAGCTATTCGGAATCAGAATCGCCTCTGTTGTTATCACCGGA 1556
Query 1533 TTCATCCTCGCCACCGTGTTCTGGCGATTAGACAATTCACCAAAAGGAGTTCAAGAGCGG 1592
||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct 1557 TTCATTCTCGCCACCGTGTTCTGGCGATTAGATAATTCGCCTAAAGGAGTTCAAGAGCGG 1616
Query 1593 TTAGGGTTCTTCGCCTTCGCGATGTCAACAATGTTCTACACTTGCGCCGATGCATTACCA 1652
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1617 TTAGGGTTCTTCGCCTTCGCGATGTCGACAATGTTCTACACTTGCGCCGATGCGTTACCA 1676
Query 1653 GTTTTTCTCCAGGAACGTTACATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGA 1712
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1677 GTTTTTCTCCAGGAACGTTATATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGA 1736
Query 1713 TCCTCCTACGTTCTCTCTCACGCCATCGTCTCTTTCCCGTCGCTTATCTTCCTCTCCGTA 1772
||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 1737 TCCTCATACGTTCTCTCTCACGCCATCGTCTCATTCCCGTCGCTCATCTTCCTCTCTGTA 1796
Query 1773 GCTTTTGCAGCGACGACGTATTGGGCAGTGGGCTTAGATGGAGGCCCAATGGGCCTTTTG 1832
||||| || ||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1797 GCTTTCGCGGCGACGACGTATTGGGCAGTGGGCTTAGATGGAGGCCTAACGGGCCTTTTG 1856
Query 1833 TTCTACTGTTTGATCATTTTAGCCTCCTTCTGGTCAGGAAGCTCCTTTGTCACGTTTCTA 1892
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1857 TTCTACTGTCTGATCATTTTAGCCTCGTTCTGGTCAGGAAGCTCCTTTGTCACGTTTCTA 1916
Query 1893 TCAGGTGTGGTTCCTAGTGTGATGTTGGGTTACACAATCGTCGTTGCTATTTTAGCTTAC 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1917 TCAGGTGTGGTTCCTAGTGTGATGTTGGGTTACACAATCGTCGTTGCTATTTTGGCTTAC 1976
Query 1953 TTCTTGTTGTTCAGTGGATTCTTCATCAACAGAAACCGAATCCCGGATTACTGGATTTGG 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 TTCTTGTTGTTCAGTGGATTCTTCATCAACAGAAACCGAATCCCGGATTACTGGATTTGG 2036
Query 2013 TTTCATTACATGTCATTGGTGAAATACCCCTACGAAGCAGTTTTACAGAACGAGTTCTCT 2072
||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||
Sbjct 2037 TTTCATTACATGTCATTGGTGAAGTACCCGTATGAAGCGGTTTTACAGAACGAGTTCTCT 2096
Query 2073 GATGCGACCAAGTGTTTTGTGAGAGGAGTTCAGATTTTCGACAACACTCCGTTAGGGGAA 2132
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 2097 GATGCGACCAAGTGTTTTGTGAGAGGAGTTCAGATTTTCGACAACACGCCATTAGGGGAA 2156
Query 2133 TTACCAGAAGTGATGAAGCTGAGGCTGCTTGGTACAGTGAGCAAGTCGCTCGGTGTGACG 2192
|||| |||||||||||||||| ||| |||||||||||||||||||| ||||| || |||
Sbjct 2157 CTACCGGAAGTGATGAAGCTGAAGCTTCTTGGTACAGTGAGCAAGTCCCTCGGGGTAACG 2216
Query 2193 ATATCTAGCTCGACGTGTTTAACTACTGGTTCGGATATTCTGACGAAGCAAGGAGTGGTT 2252
||||| ||| |||| ||||||||||||||||| |||||||||| | ||||||| ||||||
Sbjct 2217 ATATCGAGCACGACTTGTTTAACTACTGGTTCAGATATTCTGAGGCAGCAAGGTGTGGTT 2276
Query 2253 CAGCTGAGTAAATGGAATTGCTTGTTCATCACAGTTGCTTTTGGGTTCTTTTTTAGGATT 2312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2277 CAGCTGAGTAAATGGAATTGCTTGTTCATCACAGTTGCTTTTGGGTTCTTTTTTAGGATT 2336
Query 2313 TTGTTCTACTTCACTTTGTTACTTGGAAGCAAGAACAAGCGGAGGTGAAAACAAAAATGC 2372
||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 2337 TTGTTCTACTTCACTTTGTTACTAGGAAGCAAGAACAAGCGGAGGTGAAAACAACTA-G- 2394
Query 2373 TAATAGACCCAAATCAAAAACATACTTGTATTTTCTGTTTGTAATTCCTTGAATTGTTTA 2432
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2395 -AA--GACCCAAATCAAAA-CATACTTGTATTTTCTGTTTGTAATTCCTTGAATTGTTTA 2450
Query 2433 ATGCAAA 2439
||| |||
Sbjct 2451 ATGAAAA 2457
> AT3G55090.1 | Symbols: | ABC-2 type transporter family protein
| chr3:20416342-20418552 REVERSE LENGTH=2211
Length=2211
Score = 1607 bits (870), Expect = 0.0
Identities = 1577/1915 (82%), Gaps = 62/1915 (3%)
Strand=Plus/Plus
Query 474 ATCTCTGGCGAGACTCGAGATGGAGAGA-TCATGGCGGTTCTCGGAGCTAGCGGTTCGGG 532
||||| || |||||||| || ||||||| || | || ||||| ||||||||||| || ||
Sbjct 331 ATCTCCGGTGAGACTCGTGACGGAGAGATTC-TTGCCGTTCTTGGAGCTAGCGGGTCAGG 389
Query 533 GAAATCAACACTGATCGATGCATTAGCGAATCGGATTGCTAAAGGAAGCTTGAAAGGAAC 592
||||| || ||||||| || |||||||||||||| ||||||||||||||||| || ||
Sbjct 390 TAAATCCACTTTGATCGACGCTTTAGCGAATCGGATCGCTAAAGGAAGCTTGAAGGGCAC 449
Query 593 AGTGAA-GCTAAACGGAGAAACACTTCACTCTCGAATGCTCAAAGTCATATCAGCCTACG 651
|| || ||| ||||||||| | ||||| ||||| ||||| ||||| || ||||| || |
Sbjct 450 GGT-AACGCTTAACGGAGAAGCTCTTCAATCTCGGATGCTGAAAGTTATCTCAGCTTATG 508
Query 652 TAATGCAAGATGATCTTCTCTTCCCTATGCTTACCGTTGAAGAAACAC-TAATGTTCGCT 710
|||||||||| |||||||||||||| |||||||| || |||||||| | ||||||| ||
Sbjct 509 TAATGCAAGACGATCTTCTCTTCCCGATGCTTACTGTGGAAGAAAC-CTTAATGTTTGCA 567
Query 711 GCTGAGTTTCGTCTT-CCGAGAAGTTTACCTAAATCTAAGAAGAAGCTTCGTGTGCAAGC 769
||||||||||| || || ||||| ||||||||||| |||||||||||||| || |||||
Sbjct 568 GCTGAGTTTCG-ATTACCAAGAAGCTTACCTAAATCCAAGAAGAAGCTTCGAGTTCAAGC 626
Query 770 TTTGATTGATCAGTTAGGTATTAGAAACGCTGCTAAAACTATTATCGGAGACGAAGGTCA 829
| || || |||||||| || ||||||||||||||||| || || ||||||||||| ||
Sbjct 627 CCTAATCGACCAGTTAGGGATAAGAAACGCTGCTAAAACAATCATTGGAGACGAAGGACA 686
Query 830 CCGAGGAATCTCCGGTGGTGAGAGAAGACGAGTTTCGATCGGAATTGATATAATTCACGA 889
||| |||||||||||||| || ||||| ||||||||||||||||| ||||| || |||||
Sbjct 687 CCGTGGAATCTCCGGTGGAGAAAGAAGGCGAGTTTCGATCGGAATCGATATCATCCACGA 746
Query 890 TCCAATTCTTCTCTTCCTCGATGAACCAACCTCTGGTTTGGATTCAACGAGTGCTTTCAT 949
|| ||| ||||||||||||| ||||| || |||||||| ||||| || |||||||||||
Sbjct 747 CCCGATTGTTCTCTTCCTCGACGAACCTACTTCTGGTTTAGATTCCACAAGTGCTTTCAT 806
Query 950 GGTGGTTAAAGTGTTGAAGAGGATTGCTCAGAGTGGCAGTATCGTTATTATGTCGATTCA 1009
|||||||||||| |||||||| || || |||||||||||||| |||| ||||| || ||
Sbjct 807 GGTGGTTAAAGTATTGAAGAGAATCGCAGAGAGTGGCAGTATCATTATAATGTCAATACA 866
Query 1010 TCAACCGAGTCATC-GAGTTCTCGGTTTGCTTGACCGGT-TAATCTTCTTGTCTCGTGGC 1067
||| || ||||| | |||||||| |||| ||||| | || | ||||||||||| |||||
Sbjct 867 TCAGCCAAGTCA-CAGAGTTCTCAGTTTACTTGATC-GTCTTATCTTCTTGTCACGTGGA 924
Query 1068 CACACCGTGTACAGTGGATCTCCGGCGAGTCTTCCCCGTTTTTTCACCGAATTCGG-AAG 1126
|||||||| | ||||| |||||||||||||| || | |||||| ||| ||||| ||
Sbjct 925 CACACCGTCTTTAGTGGTTCTCCGGCGAGTCTACCGAGCTTTTTCGCCGGGTTCGGTAA- 983
Query 1127 TCCGATTCCGGAGAACGAGAATCGAACGGAGTTCGCGCTTGATCTCATCCGTGAGCTTGA 1186
|||||| ||||| |||||||||| ||||||||| || || ||||| ||| | || || ||
Sbjct 984 TCCGATACCGGAAAACGAGAATCAAACGGAGTTTGCACTCGATCTAATCAGAGAACTCGA 1043
Query 1187 AGGATCCGCCGGAGGAACAAGAGGATTAGTCGAATTCAACAAAAAATGGCAAGAGATGAA 1246
|||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1044 AGGATCAGCTGGAGGAACAAGAGGATTAGTTGAATTCAACAAGAAATGGCAAGAGATGAA 1103
Query 1247 GAAACATAACAA-CCGTCAACCACCATTGACTCCTCCTTCATCACCGTACCCAAATCTAA 1305
|||||| | ||| || |||| ||| | ||||| || | || || |||||||| |||
Sbjct 1104 GAAACAGAGCAATCC-TCAA--ACC-CTAACTCCGCCGGCTTCTCCAAACCCAAATTTAA 1159
Query 1306 CAC-TAAAAGAAGCAATCGCCGCCAGTATCAGCCGAGGAAAGTTGGTTTCCGGCGGTGAA 1364
| | | |||||||| || ||||||| || ||| ||||||| | || ||||| || |
Sbjct 1160 C-CTTGAAAGAAGCGATTTCCGCCAGCATAAGCAGAGGAAAACTAGTCTCCGGTGGCG-- 1216
Query 1365 TCCGTCGCTCACGGCG-GA-ACAACCACCAACACCACAA-CTCTAGCCGTACCTGCATTC 1421
| || | || | || | | ||||| | | || || ||||||| |||||||||
Sbjct 1217 GCGGTGGTTC-CTCCGTCATA-AACCA-CGGTGGCGGAACCT-TAGCCGTCCCTGCATTC 1272
Query 1422 GCGAATCCAATGTGGATCGAAATCAAAACTCTCTCGAAACGCTCAATGCTCAATTCGAGA 1481
|||||||| | ||||||||||||||||||||| | | ||||||||| ||||| || ||
Sbjct 1273 GCGAATCCGTTCTGGATCGAAATCAAAACTCTCACCAGACGCTCAATCCTCAACTCCCGA 1332
Query 1482 AGACAACCAGAGATATTCGGAAT-CAGAATCGCCTCCGTTGTTATCACCGGATTCATCCT 1540
||||||| ||| || ||||||| | || | ||| |||| | |||||||||||||| |
Sbjct 1333 CGACAACCGGAGCTACTCGGAATGC-GATTAGCCACCGTAATCGTCACCGGATTCATCTT 1391
Query 1541 CGCCACCGTGTTCTGGCGATTAGACAATTCACCAAAAGGAGTTCAAGAGCGGTTAGGGTT 1600
|||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1392 AGCCACCGTATTCTGGCGATTGGATAATTCACCAAAAGGAGTTCAAGAGCGGTTAGGGTT 1451
Query 1601 CTTCGCCTTCGCGATGTCAACAATGTTCTACACTTGCGCCGATGCAT-TACCAGTTTTTC 1659
|||||| ||||| |||||||||||||||||||||||||||||||| | | || || || |
Sbjct 1452 CTTCGCATTCGCAATGTCAACAATGTTCTACACTTGCGCCGATGC-TCTTCCCGTGTTCC 1510
Query 1660 TCCAGGAACGTTACATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGATCCTCCT 1719
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1511 TCCAGGAACGTTACATCTTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCCTCCT 1570
Query 1720 ACGTTCTCTCTCACGCCATCGTCT-CTTTCCCGTCGCTTATCTTCCTCTCCGTAGCTTTT 1778
||||||||||||||||||| || | | ||||| ||||| ||||||||||| |||||||
Sbjct 1571 ACGTTCTCTCTCACGCCATTGT-TACCTTCCCTTCGCTCATCTTCCTCTCTTTAGCTTTC 1629
Query 1779 GCAGCGACGACGTATTGGGCAGT-GGGCTTAGATGGAGGCCCAATGGGCCTTTTGTTCTA 1837
|||| |||||||| |||||| || |||||| || ||||||| ||||||| |||| |||||
Sbjct 1630 GCAGTGACGACGTTTTGGGCTGTTGGGCTT-GAAGGAGGCCTAATGGGCTTTTTATTCTA 1688
Query 1838 CTGTTTGATCATTTTAGCCTCCTTCTGGTCAGGAAGCTCCTTTGTCACGTTTCT-ATCAG 1896
||| || ||||| |||||||| |||||||| ||||||||||| || || ||||| ||| |
Sbjct 1689 CTGCTTAATCATCTTAGCCTCTTTCTGGTCCGGAAGCTCCTTCGTGAC-TTTCTTATCCG 1747
Query 1897 GTGTGGTTCCT-AGTGTGATGTTGGGTTACACAATCGTCGTTGCTATTTTAGCTTACTTC 1955
| || ||||| | ||||||||| || ||||| ||||| |||||||||||||||||||||
Sbjct 1748 GCGTCGTTCCACA-TGTGATGTTAGGCTACACGATCGTTGTTGCTATTTTAGCTTACTTC 1806
Query 1956 TTG-TTGTTCAGTGGATTCTTCATCAACAGAAACCGAATCCCGGATTACTGGATTTGGTT 2014
||| || |||||||| ||||||||||||||| | |||||||| | || |||||||||||
Sbjct 1807 TTGCTT-TTCAGTGGCTTCTTCATCAACAGAGATCGAATCCCTCAGTATTGGATTTGGTT 1865
Query 2015 TCATTA-CATGTCAT-TGGTGAAATACCCCTACGAAGCAGTT-TTACAGAACGAGTTCTC 2071
|||||| | | || | |||| || || || ||||| || ||| || ||||||||||||||
Sbjct 1866 TCATTATCTT-TC-TCTGGTTAAGTATCCATACGAGGCGGTTCTT-CAGAACGAGTTCTC 1922
Query 2072 TGATGCGACC-AAGTGTTTTGTGAGAGGAGTTCAGATTTTCGACAACACTCCGTTAGGG- 2129
||| | || || |||||||||||||| |||||| ||||||||||| | || || |||
Sbjct 1923 GGATCCTACAGAA-TGTTTTGTGAGAGGTGTTCAGCTTTTCGACAACTCGCCTTT-GGGA 1980
Query 2130 GAATT-ACCAGAA-GTGATGAAGCTGAGGCTGCTTGG-TACAGTGAGCAAGTCGCTCGGT 2186
||||| || | | | ||||||||||||||| |||| | | |||||| |||| | |||
Sbjct 1981 GAATTGAC--GTATGGGATGAAGCTGAGGCTT-TTGGATTCTGTGAGCCGGTCGATAGGT 2037
Query 2187 GTGACGATATCTAGCTCGACGTGTTTAACTACTGGTTCGGATATTCTGACGAAGCAAGGA 2246
||| |||||| ||||| ||||||||||| || ||| | ||| |||||| | ||||||||
Sbjct 2038 ATGAGGATATCGAGCTCTACGTGTTTAACGACGGGTGCTGATGTTCTGAAGCAGCAAGGA 2097
Query 2247 GTGGTTCAGCTGAGTAAATGGAATTGCTTG-TTCATCACAGTTGCTTTTGGGTTCTTTTT 2305
||| ||||| ||||||||||| |||||| || ||||| || | ||| || ||| | ||
Sbjct 2098 GTGACACAGCTTAGTAAATGGAACTGCTTGCTT-ATCACGGTAGGTTTCGGATTCCTATT 2156
Query 2306 TAGGATTTTGTTCTACTTCACTTTGTTACTTGGAAGCAAGAACAAGCGGAGGTGA 2360
|||||||||||| ||||| |||||| ||||| ||||| |||||| ||||||||
Sbjct 2157 TAGGATTTTGTTTTACTTGTGTTTGTTGCTTGGGAGCAAAAACAAGAGGAGGTGA 2211
> AT5G13580.1 | Symbols: | ABC-2 type transporter family protein
| chr5:4370692-4373201 FORWARD LENGTH=2510
Length=2510
Score = 381 bits (206), Expect = 2e-104
Identities = 667/882 (76%), Gaps = 62/882 (7%)
Strand=Plus/Plus
Query 1518 GTTGTTA-TCACCGGATTCATCCTCGCCACCGTGTTCTGGCGA-TTAGACAATTCACCAA 1575
||| ||| |||| ||||||||| | ||||| |||| |||| | |||| || || || |
Sbjct 1529 GTT-TTAGTCACTGGATTCATCTTAGCCACTATGTTTTGGC-AGCTAGATAACTCCCCTA 1586
Query 1576 AAGGAGTTCAAGAGCGGT-TAGGGTTCTTCGCCTTCGCGATGTCAACAATGTTCTACACT 1634
||||||| ||||| | || | || | |||||| || || ||||| |||| ||||||||||
Sbjct 1587 AAGGAGTCCAAGAAC-GTCTTGGATGCTTCGCTTTTGCAATGTCCACAACGTTCTACACT 1645
Query 1635 TGCGCCGATGCAT-TACCAGTTTTTCTCCAGGAACGTTACATCTTCATGAGAGAAACTGC 1693
||||| ||||| | | || ||||| ||||| ||||||| ||| |||||||||||||||||
Sbjct 1646 TGCGCAGATGC-TCTCCCTGTTTTCCTCCAAGAACGTTTCATTTTCATGAGAGAAACTGC 1704
Query 1694 TTACAACGCTTACCGGAGATCCTCCTACGTTCTCTCTCACGC-CATCGTCT-CTTTCCCG 1751
||||||||||||||| ||||||||||| || || |||||| | | | || | | ||||
Sbjct 1705 TTACAACGCTTACCGAAGATCCTCCTATGTACTATCTCACTCTCTT-GT-TGCCCTCCCT 1762
Query 1752 TCGCTT-ATCTTCCTCTC-CGTAGCTTTTGCAGCGA-CGACGTATTGGGCAGTGGGCTTA 1808
|| ||| ||| ||||||| | | ||||||||||||| | || | ||||| ||||| |||
Sbjct 1763 TC-CTTGATCATCCTCTCGCTT-GCTTTTGCAGCGATC-ACATTTTGGGGTGTGGGTTTA 1819
Query 1809 GATGGAGGCCCAATGGGCCTTT--TGTTCTACTGTT-T-GATCATTTTAGCCTCCTTCTG 1864
|||||||| | ||||| ||| | ||||||| | | | | || |||||||| |||||
Sbjct 1820 GATGGAGGTCTTATGGG--TTTCCTCTTCTACT-TCCTAG-TAATCTTAGCCTCTTTCTG 1875
Query 1865 GTCAGGAAGCTCCTTTGTCACGTTTCT-ATCAGGTGTGGTTCCT-A-GTGTGATGTTGGG 1921
| |||||||||| || ||||| || || |||||| || || || | || | ||| | ||
Sbjct 1876 GGCAGGAAGCTCATTCGTCACCTT-CTTATCAGGCGTTGTCCCACACGT-T-ATGCTCGG 1932
Query 1922 TTACACAATCGTCGTTGCTATTTTAGCTTACTTCTTG-TTGTTCAGTGGATTCTTCATCA 1980
|||||| || || || || |||||||| || |||||| || |||||||||||||||||||
Sbjct 1933 TTACACCATTGTTGTAGCCATTTTAGCCTATTTCTTGCTT-TTCAGTGGATTCTTCATCA 1991
Query 1981 ACAGAAACCGAATCCC-GGATTACTGGATTTGGTTTCATTACATGTCATTGGTGAAATAC 2039
|| || | |||||||| || | ||||||| ||||| |||||||| || || || || ||
Sbjct 1992 ACCGAGATCGAATCCCTGGCT-ACTGGATCTGGTTCCATTACATTTCCTTAGTCAAGTAT 2050
Query 2040 CCCTACGAAGCAGTTTTAC-AGAACGAGTTCTCTGATGCGACCAAGTGTTTTGTGAGAGG 2098
|| || || || || | | | ||||| ||| ||| | || |||||||| || |||||
Sbjct 2051 CCTTATGAGGCTGTGCTCCTA-AACGAATTCGGTGACCCAACAAAGTGTTTCGTCAGAGG 2109
Query 2099 AGTTCAGATTTTCGACAACACTCCGT-TAGGG-GAATTACCAGAAGTGATGAA-GCTGAG 2155
||||||||| ||||||||||| || | | || | | || | | |||||| | | ||
Sbjct 2110 AGTTCAGATATTCGACAACACACC-TCT-GGTCGCGGTGCCTCAGGGGATGAAAGTT-AG 2166
Query 2156 GCTGCTTGGTAC-AGTGAGCAAGTCGCTCGGTGTGACGAT-ATCTAGCTCGACGTGTTTA 2213
||| || | || | ||||||| || || || ||| ||| | | ||||| || || ||
Sbjct 2167 GCTTCTAGCAACTA-TGAGCAAATCACTTGGAATGAGGATCA-CAAGCTCTACTTGCTTG 2224
Query 2214 ACTACTGGTTCGGATATTCTGACGAAGCAAGGAGTG-GTT-CAG--CTGAGTAAATGGAA 2269
|| || || | || ||| || | | |||| || | ||| | | || | ||||||||
Sbjct 2225 ACCACAGGATATGACATTTTG-C-A-GCAACAAG-GCGTTACGGATCTCACCAAATGGAA 2280
Query 2270 TTGCTTGTTCATCACAGTTGCTTTTGGG-TTCTTTTTTAGGATTTTGTTCTACTTCACTT 2328
|||||||| |||| || |||| ||| ||||| ||| | || ||||||||||| ||
Sbjct 2281 TTGCTTGTGGGTCACGGTCGCTTG-GGGCTTCTTCTTTCGAATCTTGTTCTACTTTTCTC 2339
Query 2329 TG-TTACTTGGA-AGCAAGAACAAGCGGAGGTGAAAACAAAA 2368
|| || |||| |||||||||||| |||||| |||||||||
Sbjct 2340 TGCTT--TTGGGTAGCAAGAACAAGAGGAGGTAAAAACAAAA 2379
> AT2G37360.1 | Symbols: | ABC-2 type transporter family protein
| chr2:15673442-15675920 REVERSE LENGTH=2479
Length=2479
Score = 344 bits (186), Expect = 2e-93
Identities = 684/916 (75%), Gaps = 68/916 (7%)
Strand=Plus/Plus
Query 1479 AGAAGACAACCAGAGA-TATTCGGAATCAGAATCGCCTCCGTTGTTATCACCGGATTCAT 1537
|||||||||||||| | | ||||||| ||| | | | || | |||||||| ||||
Sbjct 1485 AGAAGACAACCAGA-ACTCCTCGGAATGAGACTAGGAGCTGTAATGGTCACCGGAATCAT 1543
Query 1538 CCTCGCCACCGTGTT--CTGGCGATTAGACAATTCACCAAAAGGAGTTCAAGAGCGGTTA 1595
||| || || |||| || | |||||||||| |||||||||| ||||| || |||
Sbjct 1544 CCTAGCTACAATGTTCACTAAC--CTAGACAATTCCCCAAAAGGAGCACAAGAACGTTTA 1601
Query 1596 GGGTTCTTCGCCTTCGCGATGTCAACAATGTTCTACACTTGCGCCGATGCATTACCAGTT 1655
|| |||||||| ||||| |||||||||| |||||||| || || || ||| | |||||
Sbjct 1602 GGATTCTTCGCATTCGCAATGTCAACAACATTCTACACATGTGCAGAAGCAATCCCAGTC 1661
Query 1656 TTTCTCCAGGAACGTTACATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGATCC 1715
||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1662 TTTCTACAAGAACGTTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCC 1721
Query 1716 TCCTACGTTCTCTCTCACGCCATCGTCTCTTTCCCGTCGCTTA-TCTTCCTCTCCGTA-G 1773
|||||||| |||||||| |||| |||| ||||| | |||| || ||||||||| | |
Sbjct 1722 TCCTACGTCCTCTCTCAATCCATAATCTCAATCCCGGC-CTTAATCGTCCTCTCCGCAAG 1780
Query 1774 CTTTTGCAGCGACGACGTAT-TGGGCAGTGGG-CTTAGATGGAGGC-CCAATGGGC-CTT 1829
||| || || || || | | ||||| || || || || |||||| ||||||| |||
Sbjct 1781 CTTC-GCCGCCACAACAT-TCTGGGCCGTTGGTCTC-GACGGAGGCGCCAATGGTTTCTT 1837
Query 1830 -TTGTTCTACTGTTTGATCATTT-TAGCCTCCTTCTGGTCAGGAAGCTCCTTTGTCACGT 1887
|| ||||||| | | || | ||||||| || ||| ||||||||||||| || ||||
Sbjct 1838 CTTCTTCTACT-TC--A-CAATCCTAGCCTCATTTTGGGCAGGAAGCTCCTTCGTAACGT 1893
Query 1888 TTCTATCAGGTGTGGTTCCTAGTGTGATGTTGGG-TTACACAATCGTCGTTGCTATTTTA 1946
| || || || || | || | || ||| | || || |||| |||| || || || |
Sbjct 1894 TCCTCTCCGGCGTTATACCAAACGTAATGCTCGGATT-CACAGTCGTAGTAGCGATCCTC 1952
Query 1947 GCTTACTTCTTGTTGTTCAGTGGATTCTTCATCAA-CAGAAACCGAATCCCGGATTACTG 2005
||||||||| | | ||| |||||||||||| | || | ||||| || | ||||||
Sbjct 1953 GCTTACTTCCTCCTCTTCTCCGGATTCTTCATCTCTC-GAGATCGAATTCCTGTTTACTG 2011
Query 2006 GATTTGGTTTCATTACATGTCATTGGTGAAATACCCCTACGAAGCAGTTTTACAGAACGA 2065
| | ||||| |||||||| || |||||||||||||| ||||||| ||| || ||||||||
Sbjct 2012 GCTCTGGTTCCATTACATCTCCTTGGTGAAATACCCTTACGAAGGAGTGTTGCAGAACGA 2071
Query 2066 GTTCTCTGA-TGCGACCA-AGTGTTTTGTGAGAGGAGTTCAGATT-TTCGACAACACTCC 2122
|| || | | |||| | | ||||| | |||||||||||| || |||||||| | ||
Sbjct 2072 ATT-TCAAAATCCGACGAGA-TGTTTCGCCAGAGGAGTTCAG-TTATTCGACAATTCGCC 2128
Query 2123 GTTAGGGGAATTACCAGAA-G-TGATGAA-GCTGAGGCTGCTTGGTACAGT--GAGCAAG 2177
||| ||||| || || ||| | || |||| | ||| ||| ||| | ||| |||| |
Sbjct 2129 GTTGGGGGAGTTTCC-GAACGATG-TGAAAG-TGAATCTG-TTGA-AGAGTATGAGCG-G 2182
Query 2178 TCGC-TCGGTGTGACGATATCT-A-G-CTC-GACGTGTTTAACTACTGG--TTCGGATAT 2230
| | | || | ||||| || | | | | ||| ||| | || || || || | ||||
Sbjct 2183 T-GTATTGG-G-GACGA-ATGTGACGGCGGAGACTTGTGTGACGACGGGGATT-G-ATAT 2236
Query 2231 TCTGACGA-AGCAAGG-AGT--GGTTCAGCTGAGTAAATGGAATTGCTTGTTCATCACAG 2286
| ||| | ||||||| | | || | | | |||||||||||||| |||| || || |
Sbjct 2237 TTTGAA-ACAGCAAGGGATTACGGAT-AT-T-AGTAAATGGAATTGTTTGTGGATTACTG 2292
Query 2287 TTGCTTTTGGGTTCTTT-TTTAGGATTTTGTTCTACTTCACTTTGTT-ACTTGGAAGCAA 2344
|||||| ||||| ||| |||||| ||||||| || |||||| | || | |||| |||||
Sbjct 2293 TTGCTTG-GGGTTTTTTCTTTAGGGTTTTGTTTTATTTCACTCTCTTGA-TTGGTAGCAA 2350
Query 2345 GAACAAGCGGAGGTGA 2360
|||||| |||| ||||
Sbjct 2351 GAACAAACGGAAGTGA 2366
> AT2G37362.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT2G37360 | chr2:15673687-15675978 FORWARD
LENGTH=2292
Length=2292
Score = 326 bits (176), Expect = 8e-88
Identities = 517/679 (76%), Gaps = 33/679 (5%)
Strand=Plus/Minus
Query 1479 AGAAGACAACCAGAGA-TATTCGGAATCAGAATCGCCTCCGTTGTTATCACCGGATTCAT 1537
|||||||||||||| | | ||||||| ||| | | | || | |||||||| ||||
Sbjct 750 AGAAGACAACCAGA-ACTCCTCGGAATGAGACTAGGAGCTGTAATGGTCACCGGAATCAT 692
Query 1538 CCTCGCCACCGTGTT--CTGGCGATTAGACAATTCACCAAAAGGAGTTCAAGAGCGGTTA 1595
||| || || |||| || | |||||||||| |||||||||| ||||| || |||
Sbjct 691 CCTAGCTACAATGTTCACTAAC--CTAGACAATTCCCCAAAAGGAGCACAAGAACGTTTA 634
Query 1596 GGGTTCTTCGCCTTCGCGATGTCAACAATGTTCTACACTTGCGCCGATGCATTACCAGTT 1655
|| |||||||| ||||| |||||||||| |||||||| || || || ||| | |||||
Sbjct 633 GGATTCTTCGCATTCGCAATGTCAACAACATTCTACACATGTGCAGAAGCAATCCCAGTC 574
Query 1656 TTTCTCCAGGAACGTTACATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGATCC 1715
||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 573 TTTCTACAAGAACGTTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCC 514
Query 1716 TCCTACGTTCTCTCTCACGCCATCGTCTCTTTCCCGTCGCTTA-TCTTCCTCTCCGTA-G 1773
|||||||| |||||||| |||| |||| ||||| | |||| || ||||||||| | |
Sbjct 513 TCCTACGTCCTCTCTCAATCCATAATCTCAATCCCGGC-CTTAATCGTCCTCTCCGCAAG 455
Query 1774 CTTTTGCAGCGACGACGTAT-TGGGCAGTGGG-CTTAGATGGAGGC-CCAATGGGC-CTT 1829
||| || || || || | | ||||| || || || || |||||| ||||||| |||
Sbjct 454 CTTC-GCCGCCACAACAT-TCTGGGCCGTTGGTCTC-GACGGAGGCGCCAATGGTTTCTT 398
Query 1830 -TTGTTCTACTGTTTGATCATTT-TAGCCTCCTTCTGGTCAGGAAGCTCCTTTGTCACGT 1887
|| ||||||| | | || | ||||||| || ||| ||||||||||||| || ||||
Sbjct 397 CTTCTTCTACT-TC--A-CAATCCTAGCCTCATTTTGGGCAGGAAGCTCCTTCGTAACGT 342
Query 1888 TTCTATCAGGTGTGGTTCCTAGTGTGATGTTGGG-TTACACAATCGTCGTTGCTATTTTA 1946
| || || || || | || | || ||| | || || |||| |||| || || || |
Sbjct 341 TCCTCTCCGGCGTTATACCAAACGTAATGCTCGGATT-CACAGTCGTAGTAGCGATCCTC 283
Query 1947 GCTTACTTCTTGTTGTTCAGTGGATTCTTCATCAA-CAGAAACCGAATCCCGGATTACTG 2005
||||||||| | | ||| |||||||||||| | || | ||||| || | ||||||
Sbjct 282 GCTTACTTCCTCCTCTTCTCCGGATTCTTCATCTCTC-GAGATCGAATTCCTGTTTACTG 224
Query 2006 GATTTGGTTTCATTACATGTCATTGGTGAAATACCCCTACGAAGCAGTTTTACAGAACGA 2065
| | ||||| |||||||| || |||||||||||||| ||||||| ||| || ||||||||
Sbjct 223 GCTCTGGTTCCATTACATCTCCTTGGTGAAATACCCTTACGAAGGAGTGTTGCAGAACGA 164
Query 2066 GTTCTCTGA-TGCGACCA-AGTGTTTTGTGAGAGGAGTTCAGATT-TTCGACAACACTCC 2122
|| || | | |||| | | ||||| | |||||||||||| || |||||||| | ||
Sbjct 163 ATT-TCAAAATCCGACGAGA-TGTTTCGCCAGAGGAGTTCAG-TTATTCGACAATTCGCC 107
Query 2123 GTTAGGGGAATTACCAGAA 2141
||| ||||| || || |||
Sbjct 106 GTTGGGGGAGTTTCC-GAA 89
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121133915085
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5