BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483001
Length=2143
Score E
Sequences producing significant alignments: (Bits) Value
AT2G39750.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 3424 0.0
AT5G06050.1 | Symbols: | Putative methyltransferase family pro... 863 0.0
AT2G39740.1 | Symbols: | Nucleotidyltransferase family protein... 329 5e-89
> AT2G39750.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr2:16578824-16582404
REVERSE LENGTH=2370
Length=2370
Score = 3424 bits (1854), Expect = 0.0
Identities = 2068/2167 (95%), Gaps = 31/2167 (1%)
Strand=Plus/Plus
Query 1 GCTAATGAAGCCTCTCCCTAATGGCGATCT-TCTCAAATCCCCCACTCTAATCAAGATCT 59
|||||||||||||||| ||||||||||||| | |||||||||| ||||| ||||||||||
Sbjct 120 GCTAATGAAGCCTCTCACTAATGGCGATCTGT-TCAAATCCCCAACTCTGATCAAGATCT 178
Query 60 CCGCCTTAGTTTTCGTCACCGTCGCTTTCTTCTACTTAGGCAAGCATTGGTCCGACGATG 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 CCGCCTTAGTTTTCGTCACCGTCGCTTTCTTCTACTTAGGCAAGCATTGGTCCGACGATG 238
Query 120 GCTACCAACAGCTCGTCTTCTTCTCCTCCTCCACCTCCGGCAGCTCGATCCCGGAGGTCT 179
|||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct 239 GCTACCAACAGCTCGTCTTCTTCTCCTCTTCCACTTCCGGTAGCTCGATCCCGGAGGTCT 298
Query 180 CCGTCTCACCGAATAGTAACAGAGT-TTTCAATTTATCTGCGATAATTCCTACTAACCAT 238
|||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct 299 CCGTTTCACCGAATAGTAACAGAGTCTTT-AATTTATCAGCGATAATTCCTACTAACCAT 357
Query 239 ACCGAGATTGAAATCCCCGCCACAATACAACAGCAACCTCCGTC---GGT---------- 285
||| |||||||||||||||||||||||| ||| ||||||||||| |||
Sbjct 358 ACCCAGATTGAAATCCCCGCCACAATACGACAACAACCTCCGTCGGTGGTGGCGGACACG 417
Query 286 -----GGTTAAGGTGGAAGCTAAtcctcctcctcctccaccttctcctccacctccttct 340
|||||||||||||||||||||||||||||||||| | ||||| | ||| | ||
Sbjct 418 GAGAAGGTTAAGGTGGAAGCTAATCCTCCTCCTCCTCCA-C--CTCCTTCTCCTTCACCT 474
Query 341 cctcctccGCCTGGTCTGGTTAAGAGCTTTGGGATAGTAGATGCGAATGGTGTGATGTCT 400
|||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 475 CCTCCTCCGCCTGGTCCGGTTAAGAGCTTTGGGATAGTTGATGCGAACGGTGTGATGTCT 534
Query 401 GACGATTTTGAGGTGGGAGAGGTTGAGAGTGATACTGTGGAAGATTGGGGGAATCAGACA 460
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 535 GACGATTTTGAGGTGGGTGAGGTTGAGAGTGATACAGTGGAAGATTGGGGGAATCAGACT 594
Query 461 GAGATCGTTGAAGCGAAAAGGGACGGCGATTCTAAGGCTAGGGTTAGAATTAAGAAATTT 520
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 595 GAGATCGTTGAGGCGAAAAGCGACGGTGATTCTAAGGCTAGGGTTAGAATTAAGAAATTT 654
Query 521 GGGATGTGTCGTGAGAGTATGAGAGAGTATATACCTTGTTTGGATAATACTGATGCGATA 580
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 655 GGGATGTGTCCTGAGAGTATGAGAGAGTATATACCTTGTTTGGATAATACTGATGTGATA 714
Query 581 AAGAAGCTCAAATCTACAGAACGAGGTGAGAGATTCGAGCGTCATTGTCCTGAGAAAGGT 640
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 715 AAGAAGCTTAAATCGACAGAGCGAGGTGAGAGATTCGAGCGTCATTGTCCTGAGAAAGGT 774
Query 641 AAAGGCTTGAATTGCTTGGTTCCGCCTCCTAAAGGTTATCGTCAGCCGATTCCATGGCCT 700
||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct 775 AAAGGCTTGAATTGCTTAGTTCCACCTCCTAAAGGTTACCGTCAGCCGATTCCATGGCCT 834
Query 701 AAAAGTCGTGACGAGGTATGGTTTAGCAATGTTCCTCATACTCGGCTTGTTGAAGACAAA 760
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 AAAAGCCGTGACGAGGTATGGTTTAGCAATGTTCCTCATACTCGGCTTGTTGAAGACAAA 894
Query 761 GGTGGTCAGAACTGGATTTCACGAGACAAGAACAAGTTCAAGTTTCCTGGAGGTGGTACA 820
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 GGAGGTCAGAACTGGATTTCACGAGACAAGAACAAGTTCAAGTTTCCTGGAGGTGGTACA 954
Query 821 CAGTTTATTCATGGGGCTGATCAGTACTTGGACCAGATGTCTAAGATGGTTTCTGATATC 880
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 CAGTTTATTCATGGGGCTGATCAGTACTTGGACCAGATGTCTAAGATGGTTTCTGATATT 1014
Query 881 ACGTTTGGCAAGCATATTAGGGTTGCTATGGATGTTGGTTGTGGTGTGGCGAGTTTTGGC 940
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 ACGTTTGGCAAGCATATTAGGGTTGCTATGGATGTTGGTTGTGGTGTGGCGAGTTTTGGT 1074
Query 941 GCTTATCTATTGTTTCGCGATGTCTTGACAGTGTCTGTTGCACCAAAAGATGTCCACGAG 1000
||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||| |||
Sbjct 1075 GCTTATCTATTGTCTCGTGATGTCATGACAATGTCTGTTGCACCAAAAGATGTCCATGAG 1134
Query 1001 AACCAAATTCAATTTGCTCTTGAGCGTGGTGTGCCTGCTATGGCGGCAGCATTTGCTACA 1060
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1135 AACCAAATTCAATTTGCTCTTGAGCGTGGTGTGCCTGCTATGGCGGCAGCATTTGCGACA 1194
Query 1061 AGGCGTTTGTTATACCCAAGCCAAGCTTTTGATCTTATTCATTGTTCACGATGTAGAATC 1120
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1195 AGGCGTTTGTTATATCCAAGCCAAGCTTTTGATCTTATTCATTGTTCAAGATGTAGAATC 1254
Query 1121 AACTGGACTCGTGATGATGGAATTTTGCTCCTTGAGATCAATAGAATGCTGCGCGCTGGA 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 AACTGGACTCGTGATGATGGAATTTTGCTCCTTGAGATCAATAGAATGCTGCGCGCTGGA 1314
Query 1181 GGATATTTTGCTTGGGCTGCACAGCCTGTTTATAAGCATGAACCCGCTTTGGAAGAACAA 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 GGATATTTTGCTTGGGCTGCACAGCCTGTTTATAAGCATGAACCCGCTTTGGAAGAACAA 1374
Query 1241 TGGACAGAAATGCTGAATCTTACTACTAGCCTTTGCTGGAAATTGGTAAAGAAGGAAGGA 1300
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 1375 TGGACAGAAATGCTGAATCTTACTATTAGCCTCTGCTGGAAATTGGTAAAGAAGGAAGGA 1434
Query 1301 TACGTTGCAATCTGGCAGAAGCCTTTCAACAACGACTGTTATTTGAGTCGTGAGGCTGGG 1360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1435 TACGTTGCAATCTGGCAGAAGCCTTTCAACAACGACTGCTATTTGAGTCGTGAGGCTGGG 1494
Query 1361 GCTAAACCTCCTCTTTGTGATGAATCTGATGACCCCGATAATGTTTGGTACACAAATCTG 1420
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1495 ACTAAACCTCCTCTTTGTGATGAATCAGATGATCCCGATAATGTTTGGTACACAAATCTG 1554
Query 1421 AAACCTTGCATCAGTCGCATACCTGAGAATGGATATGGAGGAAAGGTCCCCTTATGGCCT 1480
||||||||||||||||||||||||||||| || || |||||||| |||||||||||||||
Sbjct 1555 AAACCTTGCATCAGTCGCATACCTGAGAAAGGGTACGGAGGAAACGTCCCCTTATGGCCT 1614
Query 1481 GCCCGCCTGCATACTCCACCTGATAGGCTGCAGACGATAAAATTTGATTCCTACATTGCT 1540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1615 GCCCGTCTGCATACTCCACCTGATAGGCTGCAGACGATAAAATTTGATTCCTACATTGCT 1674
Query 1541 AGGAAAGAGCTATTCAAGGCAGAATCAAAATATTGGAATGAAATAATTGGGGGATATGTT 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1675 AGGAAAGAGCTATTCAAGGCAGAATCAAAATATTGGAATGAAATAATTGGGGGCTATGTT 1734
Query 1601 CGCGCCTTGAAATGGAAAAAGATGAAACTAAGAAATGTTTTGGACATGAGAGCAGGCTTT 1660
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1735 CGCGCCTTAAAATGGAAAAAGATGAAACTAAGAAATGTTTTGGACATGAGAGCAGGCTTT 1794
Query 1661 GGCGGATTTGCAGCTGCACTAAATGATCATAAACTCGATTGCTGGGTTCTAAGTGTGGTT 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1795 GGCGGATTTGCAGCTGCACTAAATGATCATAAACTCGATTGCTGGGTTCTAAGCGTGGTT 1854
Query 1721 CCTGTCAGTGGGCCTAACACATTGCCTGTCATTTATGACCGTGGACTGTTAGGAGTTATG 1780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1855 CCTGTCAGTGGGCCTAACACATTGCCTGTCATTTATGACCGTGGACTGTTAGGAGTGATG 1914
Query 1781 CATGATTGGTGTGAACCATTTGATACATACCCACGGACATATGACTTCTTACATGCCTCT 1840
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1915 CACGATTGGTGTGAACCATTTGATACATACCCACGGACATATGACTTCTTACATGCCTCT 1974
Query 1841 GGACTCTTCTCAATCGAGAGGAAAAGATGTGAGATGTCAACCATATTGTTAGAGATGGAC 1900
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1975 GGACTCTTCTCGATCGAGAGAAAAAGATGTGAGATGTCAACCATATTGTTAGAGATGGAC 2034
Query 1901 AGGATATTGAGACCCGGTGGAAGAGCATACATTAGGGATTCAATTGATGTTATGGATGAA 1960
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2035 CGGATATTAAGACCCGGTGGAAGAGCATACATTAGGGATTCAATTGATGTTATGGATGAA 2094
Query 1961 ATTCAAGAAATCACAAAGGCTATGGGTTGGCATACTTCTCTGCGTGACACATCCGAGGGT 2020
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2095 ATTCAAGAAATCACAAAGGCCATGGGTTGGCATACTTCTCTGCGTGACACATCCGAGGGT 2154
Query 2021 CCTCACGCAAGTTACAGGATTCTAACATGTGAGAAGCGTCTCCTTCGAGCTTAATACCAG 2080
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2155 CCTCACGCAAGTTACAGGATTCTAACATGCGAGAAGCGTCTCCTTCGAGCTTAATACCAC 2214
Query 2081 ACAAGTTACTGCACTTTAGTCAACACAATATATT--GTTTGGTA--ATATCTCTTATTGT 2136
||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct 2215 ACAAGTTACTGCACT--AGTCAACACAATATATTTTGTTTGGTAGTATATCTCTTATTGT 2272
Query 2137 TTTCTTC 2143
|||||||
Sbjct 2273 TTTCTTC 2279
> AT5G06050.1 | Symbols: | Putative methyltransferase family protein
| chr5:1820132-1823771 FORWARD LENGTH=2312
Length=2312
Score = 863 bits (467), Expect = 0.0
Identities = 1239/1604 (77%), Gaps = 84/1604 (5%)
Strand=Plus/Plus
Query 497 GCTAGGGTTAGAATTAAGAAATTTGGGATGTG-TCGTGAGAGTATGAGAGAGTATATACC 555
||||| ||||| | | |||||||| ||| || ||| |||| ||||| ||||| || ||
Sbjct 488 GCTAGAGTTAGTGTGAGGAAATTTGAGATTTGTTCG-GAGAATATGACTGAGTACATTCC 546
Query 556 TTGTTTGGATAATACT-GATGCGAT-AAAGAAGCTCAAATCTACAGAACGAGGTGAGAGA 613
||||||||||||| | || || || ||| | ||| || || || | || |||||| ||
Sbjct 547 TTGTTTGGATAAT-GTAGAAGCCATCAAA-AGGCTTAATTCAACGGCGCGTGGTGAGCGA 604
Query 614 TTCGAGCGTCATTGTCCTGA-GAAAGGTAA-AGGCTTGAATTGCTTGGTTCCGCCTCCTA 671
||||| || |||||||| | | | || || || ||||||||| |||||| ||||
Sbjct 605 TTCGAACGGAATTGTCCTAACG-ATGG-AATGGGATTGAATTGCACCGTTCCGATTCCTC 662
Query 672 AAGGTTATCGTCAG-CCGATTCCATGGCCTAAAAGTCGTGACGAGGTATGGTTTAGCAAT 730
|||| || ||| || |||||||| ||||| | ||| ||||| ||||| ||||| | ||||
Sbjct 663 AAGGATACCGT-AGTCCGATTCCGTGGCCGAGAAGCCGTGATGAGGTGTGGTTCAACAAT 721
Query 731 GTTCCTCATACTCGGCTTGTTGAAGACAAAGGTGGTCAGAACTGGA-TT-TCACGAGACA 788
||||| |||||| ||||||||||||||||||||||| || |||| || | | |||| |
Sbjct 722 GTTCCACATACTAAACTTGTTGAAGACAAAGGTGGTCAAAATTGGATTTATAAAGAGA-A 780
Query 789 AGAACAAGTTCAAGTTTCCTGGAGGTGGTACACAGTTTATTCATGGGGCTGATCAGTACT 848
| |||| || ||||||||||| |||||||| |||||||| || || |||||||||||||
Sbjct 781 TG-ACAAATTTAAGTTTCCTGGTGGTGGTACTCAGTTTATACACGGAGCTGATCAGTACT 839
Query 849 TGGACCAGATGTCTAAGATGGTTTCTGATATCACG-TTTGGCAAGCATATTA-GGGTTGC 906
|||| ||||| ||| ||||| || ||||||| | | ||||| || |||| | | ||||
Sbjct 840 TGGATCAGATCTCTCAGATGATTCCTGATATTA-GCTTTGGTAACCATA-CACGAGTTGT 897
Query 907 TATGGATGTTGGTTGTGGTGTGGCGAGTTTTGGCGCTTATC-TATTGTTTCGCGATGTCT 965
| | || |||| ||||||||||| |||||||| || || | || ||| || ||||||
Sbjct 898 TCTTGACATTGGATGTGGTGTGGCAAGTTTTGGTGCCTA-CTTAATGTCACGAAATGTCT 956
Query 966 TGAC-AGTGTCTGTTGCACCAAAAGATGTCCACGAGAACCAAATTCAATTTGCTCTTGAG 1024
|||| | ||||| | || ||||||||||| ||||||||||| || || ||||||||||||
Sbjct 957 TGACTA-TGTCTATAGCTCCAAAAGATGTTCACGAGAACCAGATACAGTTTGCTCTTGAG 1015
Query 1025 CGTGGTGTGCCTGCTATGGCGGCAGCATTTGCTACAAGGCGTTTGTTATACCCAAGCCAA 1084
|||||||| ||||| |||| ||||||||| | ||| || | ||||| || |||||||||
Sbjct 1016 CGTGGTGTTCCTGCAATGGTGGCAGCATTCACAACACGGAGATTGTTGTATCCAAGCCAA 1075
Query 1085 GCTTTTGATCTT-ATTCATTGTTCACGATGTAGAATCAACTGGACTCGTGATGATGGAAT 1143
||||||||| || | ||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 1076 GCTTTTGAT-TTGGTACATTGTTCAAGATGTAGAATCAACTGGACTCGTGATGATGGGAT 1134
Query 1144 TTTGCTCCTTGA-GATCAATAGAATGCTGCGCGCTGGAGGATATTTTGCTTGGGCTGCAC 1202
|||||||||| | | ||||| ||||| || || ||||||||||||| |||||| ||||
Sbjct 1135 CCTGCTCCTTGAAGTT-AATAGGATGCTTCGTGCCGGAGGATATTTTGTTTGGGCAGCAC 1193
Query 1203 AGCCTGTTTATAAGCATGAACCCGCTTTGGAAGAACAATGG-ACAGAAATGCTGAATCTT 1261
| ||||| |||||||||||| || ||||||||||| ||| | ||| ||||| || ||
Sbjct 1194 AACCTGTATATAAGCATGAAAAGGCCTTGGAAGAACAGTGGGA-AGAGATGCTAAACCTG 1252
Query 1262 ACTACTAGCCTTTGCTGGAAA-TTGGTAAAGAAGGAAGGATACGTTGCAATCTGGCAGAA 1320
|| ||||| || |||||| ||| |||||||||||||||| | || |||||||||||
Sbjct 1253 ACCACTAGGCTGTGCTGGGTTCTTG-TAAAGAAGGAAGGATATATAGCTATCTGGCAGAA 1311
Query 1321 GCCTTTCAACAACGACT-GTTATTTGAGTCGTGAG-GCTGGGGCTAAA-CCTCCTCTTTG 1377
|||| | || ||| ||| |||| | ||||||| | ||||| | | | |||||| || |
Sbjct 1312 GCCTGTAAATAAC-ACTTGTTACCTAAGTCGTG-GTGCTGGAG-TCAGTCCTCCT-TT-G 1366
Query 1378 TGATGAAT-CTGA---TGACCCCGATAATGTTTGGTACACAAATCTGAAACCTTGCATCA 1433
|| ||| |||| |||||| ||||||||||||||| ||||||| | |||||||
Sbjct 1367 TGC--AATTCTGAAGATGACCCAGATAATGTTTGGTACGTGGATCTGAAGGCATGCATCA 1424
Query 1434 GTCGCATACCTGAGAATGGATATGGAGGAAAGGTC-C-CCTTATGGCCTGCCCGCCTGCA 1491
| | || || ||||||||||||| ||| | | |||| |||| || || | |
Sbjct 1425 CTAGAATTGAAGAAAATGGATATGGAGCAAATCTTGCTCCTT--GGCCAGCTCGTTTAC- 1481
Query 1492 T-ACTCCACCTGATAGGCTGCAGACGATA-AAATTTGATTCCTACATTGCTAGGAAAGAG 1549
| || ||||| |||||||||||||| ||| ||||| ||||| ||||| || | ||||||
Sbjct 1482 TGACCCCACCGGATAGGCTGCAGACAATACAAATT-GATTCATACATAGCCCGAAAAGAG 1540
Query 1550 CTATTCA-AGGCAGAATCAAAATATTGGAATGAAATAAT-TGGGGGATATGTTCGCGCCT 1607
||||| || | |||||||| || ||||| |||||||| | ||||| |||
Sbjct 1541 CTATTTGTAGCC-GAATCAAAGTACTGGAAAGAAATAATATCAAAC-TATGTAAATGCCC 1598
Query 1608 TGAAA-TGGAAAAAGAT-GAAACTAAGAAATGTTTTGGACATGAGAGCAGGCTTTGGCGG 1665
| | | ||||| |||| | | || |||||||| |||||||||||||| || ||||||||
Sbjct 1599 T-ACACTGGAAGCAGATAGGA-CTCAGAAATGTCTTGGACATGAGAGCTGGATTTGGCGG 1656
Query 1666 ATTTGCAGCTGCACTAAATGATCATAAAC-TCGATTGCTGGGTTCT-AAGTGTGGTTCCT 1723
||||||||||||| || ||| | |||| | || ||||||||||| || || | ||
Sbjct 1657 ATTTGCAGCTGCATTAGCTGAGC-TAAAGGTTGACTGCTGGGTTCTTAAC-GTCATCCCA 1714
Query 1724 GTCAGTGGGCCTAACACATTGCCTGTCATTTATGACCGTGGACTG-TTAGGAGTTATGCA 1782
|| ||||| || |||||||||||||| || ||||||||||||||| || |||||||||||
Sbjct 1715 GTGAGTGGTCCCAACACATTGCCTGTTATATATGACCGTGGACTGCTT-GGAGTTATGCA 1773
Query 1783 TGATTGGTGTGAACCATTTGATACATACCCACGGACATATGACTT-CTTACATGCCT-CT 1840
|||||||||||||| |||||||| |||||| | || || || || || ||||| | |
Sbjct 1774 CGATTGGTGTGAACCTTTTGATACTTACCCAAGAACCTACGATTTGCTG-CATGC-TGCG 1831
Query 1841 GGACTCTTCTCAATCGAGAGGAAAAGATGTGAGATGTCAACCAT-ATTGTTAGAGATGGA 1899
|| || || || || || || |||||||| | ||| |||| || || | ||||||||||
Sbjct 1832 GGTCTGTTTTCCATTGAAAGAAAAAGATGCAACATGACAACAATGAT-GCTAGAGATGGA 1890
Query 1900 CAGGATATTGAGACCCGGTGGAAGAGCATACATTA-GGGATTCAATTGATGTTATG-GAT 1957
| |||| || ||||| || ||| | | |||||| | |||| |||| |||| | | | |
Sbjct 1891 CCGGATTTTAAGACCTGGAGGACGTGTATACAT-ACGGGACACAATCAATGTAACGAG-T 1948
Query 1958 GAAATTCAAGAAATCACAAAGGCTATG-GGTTGGCATACTT-CTCTGCGTGACACATCC- 2014
|| ||||||| || ||| || ||| ||| |||| || || | ||||| || | |
Sbjct 1949 GAGCTTCAAGAGATTGGAAACGCAATGAGGT-GGCACACGAGCT-TACGTGAAAC-TGCT 2005
Query 2015 GAGGGTCCTCACGCAAGTTACAGGATTCTAACATGTGAGAAGCG 2058
|| || |||||| ||||||||||| |||| ||||||||||||
Sbjct 2006 GAAGGACCTCACTCAAGTTACAGGGTTCTCTTATGTGAGAAGCG 2049
> AT2G39740.1 | Symbols: | Nucleotidyltransferase family protein
| chr2:16575752-16579120 FORWARD LENGTH=2142
Length=2142
Score = 329 bits (178), Expect = 5e-89
Identities = 199/208 (96%), Gaps = 6/208 (3%)
Strand=Plus/Minus
Query 1940 TCAATTGATGTTATGGATGAAATTCAAGAAATCACAAAGGCTATGGGTTGGCATACTTCT 1999
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2142 TCAATTGATGTTATGGATGAAATTCAAGAAATCACAAAGGCCATGGGTTGGCATACTTCT 2083
Query 2000 CTGCGTGACACATCCGAGGGTCCTCACGCAAGTTACAGGATTCTAACATGTGAGAAGCGT 2059
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2082 CTGCGTGACACATCCGAGGGTCCTCACGCAAGTTACAGGATTCTAACATGCGAGAAGCGT 2023
Query 2060 CTCCTTCGAGCTTAATACCAGACAAGTTACTGCACTTTAGTCAACACAATATATT--GTT 2117
|||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||
Sbjct 2022 CTCCTTCGAGCTTAATACCACACAAGTTACTGCACT--AGTCAACACAATATATTTTGTT 1965
Query 2118 TGGTA--ATATCTCTTATTGTTTTCTTC 2143
||||| |||||||||||||||||||||
Sbjct 1964 TGGTAGTATATCTCTTATTGTTTTCTTC 1937
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106274553765
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5