BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483086 Length=1552 Score E Sequences producing significant alignments: (Bits) Value AT2G40320.1 | Symbols: TBL33 | TRICHOME BIREFRINGENCE-LIKE 33 |... 2276 0.0 AT3G11030.1 | Symbols: TBL32 | TRICHOME BIREFRINGENCE-LIKE 32 |... 392 5e-108 > AT2G40320.1 | Symbols: TBL33 | TRICHOME BIREFRINGENCE-LIKE 33 | chr2:16840147-16842282 FORWARD LENGTH=1604 Length=1604 Score = 2276 bits (1232), Expect = 0.0 Identities = 1465/1574 (93%), Gaps = 29/1574 (2%) Strand=Plus/Plus Query 1 AGTAATTCTTGAAGCAATGCCAAAAT-AAGTTCTTTTGGCTTCCTCTTCCCACA-TCTTA 58 |||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct 1 AGTATTTCTTGAAGCAATTCCAAAATAAAGTTCTTTTGGCTTCCTCCTCCCACATTCTTA 60 Query 59 TTTGGTTGAGGAGAATGAGATCATCAAGAACCCAAAGTGTTCATTTCTTAATTTTATCTT 118 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 61 TTTGGTTGAGGAGAATGAGATCATCAAGAACACAAAGTGTTCATTTCTTAATTTTATCTC 120 Query 119 CTCTTTTCCTAATTATATAAAATTTGAACACTGAAATCACATTTGTAACACTCATTCTC- 177 ||||||||||||| |||||||| || ||||||||||||||||||||| |||||| Sbjct 121 CTCTTTTCCTAATAATATAAAA-TT------TGAAATCACATTTGTAACACTAATTCTCA 173 Query 178 AATCCTAAACATGAAACCTTCATCACCAATTTCACTCGCTACTTCTTCAATTGCTAGAAA 237 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct 174 AATCCTAAACATGAAACCTTCATCACCAATTTCACTCACTAGTTCTTCAATTGCTAGAAA 233 Query 238 AACTCGTCTTTCACCTTATCTCTTCACACTCTTAGCTTTTATCCTCTTCGTCTCTGTCCT 297 | ||||| |||| ||||| ||||||||||||||||| || || || |||||||||||||| Sbjct 234 AGCTCGTTTTTCTCCTTACCTCTTCACACTCTTAGCCTTCATTCTTTTCGTCTCTGTCCT 293 Query 298 CTATGGTGAAGATTTCATGTGCATATTTGGACAGCTCGAGCCTAACTTTGTCCTCCCGCC 357 ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 294 CTATGGTGAAGATTTTATGTGCATCTTTGGACAGCTCGAGCCTAACTTCGTCCTCCCGCC 353 Query 358 TTCTCGAACAACCGAGAAGAACAAGAAGTCAGAGAAGCTTGCGTTTTCTATTGGTAAAAC 417 |||||||||| |||| ||||| ||||| || ||||||||||||||| ||||||||||||| Sbjct 354 TTCTCGAACACCCGAAAAGAATAAGAAATCGGAGAAGCTTGCGTTTGCTATTGGTAAAAC 413 Query 418 AGAAGAAAGTTGTGACGTTTTCAGCGGGAAGTGGGTGAGAGATGAAGTCTCCCGACCACC 477 ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 414 AGAGGAAAGCTGTGACGTTTTCAGCGGGAAATGGGTGAGAGATGAAGTCTCCCGACCACT 473 Query 478 GTACGAAGAATGGGAGTGTCCGTACATTCAACCTCAGCTTACGTGTCAAGAACACGGCCG 537 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 474 GTATGAGGAATGGGAGTGTCCGTACATTCAACCTCAGCTTACATGTCAAGAACACGGCCG 533 Query 538 TCCCGACAAAGATTACCAATTCTGGCGGTGGCAACCCAATCATTGCGATCTTCCCTCGTT 597 |||||||||||| ||||| || ||||||||||| || ||||| ||||||||||||||||| Sbjct 534 TCCCGACAAAGACTACCAGTTTTGGCGGTGGCAGCCTAATCACTGCGATCTTCCCTCGTT 593 Query 598 CAACGCGTCGCTGATGCTGGAGACATTGAGAGGGAAGAGGATGATGTATGTAGGAGACTC 657 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 594 CAACGCGTCACTGATGCTGGAGACATTAAGAGGGAAGAGGATGATGTATGTAGGAGACTC 653 Query 658 ATTAAACCGTGGAATGTTTGTATCGATGATTTGTCTTCTTCATCGTCTTATCCCTGAAGA 717 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 654 GTTAAACCGTGGAATGTTTGTATCAATGATTTGTCTTCTTCATCGTCTTATTCCTGAAGA 713 Query 718 TCAGAAATCAATCAAAACCAATGGTTCCCTCACTGTCTTCACTGCCAAGGAGTATAACGC 777 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 714 TCAGAAATCAATTAAAACCAATGGTTCCCTCACTGTCTTCACTGCCAAGGAGTATAACGC 773 Query 778 GACGATAGAGTTCTATTGGGCACCGTTTCTTCTAGAATCGAATTCAGACGATGCAATTGT 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 774 GACGATAGAGTTCTATTGGGCACCGTTTCTTCTAGAATCGAATTCAGACGATGCAATTGT 833 Query 838 CCATAGAATATCGGATAGGGTTGTGAGAAAAGGATCAATTAACAAACATGGACGGCACTG 897 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 834 CCATAGAATATCGGATAGGGTTGTGAGAAAAGGATCAATTAACAAACATGGTCGTCACTG 893 Query 898 GAAAGGCGTCGATATAATCGTATTCAACACTTATCTATGGTGGATGACTGGATTGAAGAT 957 |||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct 894 GAAAGGAGTCGATATAATCATCTTCAACACTTATCTGTGGTGGATGACTGGATTGAAGAT 953 Query 958 GAACATCTTGCAAGGATCGTTTGCCGATAAAGAGAAGAATATCGTGGAGGTTTCGACTGA 1017 ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 954 GAACATCTTGCAAGGATCGTTTGATGATAAAGAGAAGAATATCGTAGAGGTTTCGACTGA 1013 Query 1018 AGATGCATACCGGATGGGTATGAAGAGTATGTTGAGATGGGTGAAGAACAATATGGATCG 1077 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1014 AGATGCGTACCGGATGGGTATGAAGAGTATGTTGAGATGGGTGAAGAACAACATGGATCG 1073 Query 1078 TAAGAAAACTAGGGTTTTCTTCACAAGCATGTCTCCTACTCATGCCAAGGGCATAGATTG 1137 ||||||||||||||| |||||||| ||||||||||| || ||||||||||| |||||||| Sbjct 1074 TAAGAAAACTAGGGTCTTCTTCACTAGCATGTCTCCAACGCATGCCAAGGGGATAGATTG 1133 Query 1138 GGGAGGTGGACCGGGTCAGAATTGCTATAATCAGACAACACTAATAGAAGATCCGAGCTA 1197 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1134 GGGAGGTGAACCGGGTCAGAATTGCTATAATCAGACAACACTTATAGAAGATCCAAGCTA 1193 Query 1198 TTGGGGATCAGATTGTCGGAAAAGTATAATGAAAGTGATTGGAGAAGTGTTTGGAAGATC 1257 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1194 CTGGGGATCAGATTGTAGGAAAAGCATAATGAAAGTGATTGGAGAAGTGTTTGGAAGATC 1253 Query 1258 GAAAACACCAATAACGTTACTGAACATAACGCAGATGTCGAATTATAGGAAAGATGCTCA 1317 ||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct 1254 GAAAACACCGATAACGTTACTGAACATAACGCAAATGTCGAATTACAGGAAAGATGCACA 1313 Query 1318 TACGTCGATATACAAGAAGCAGTGGAGTCCACTTACAGCGGAGCAGCTGGAGAATCCAAC 1377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1314 TACGTCGATATACAAGAAGCAGTGGAGTCCACTTACAGCGGAGCAGCTGGAGAATCCAAC 1373 Query 1378 GAGCTATGCGGATTGTGTACACTGGTGCTTGCCTGGCCTTCAAGATACTTGGAATGAGCT 1437 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1374 GAGCTATGCGGATTGTGTACATTGGTGCTTGCCTGGCCTTCAAGATACTTGGAATGAGCT 1433 Query 1438 TCTCTTTGCTAAACTTTTCTATCCTTGAGAGAAGAGAA--CATCTTTTT-----G--G-- 1486 |||||||||||||||||||||| ||||||| ||||||| ||| ||||| | | Sbjct 1434 TCTCTTTGCTAAACTTTTCTATACTTGAGATAAGAGAAAACATTTTTTTCCTTTGAAGAC 1493 Query 1487 --------TTTTAGATTTTGGAAAGAGATATTGTCGAGAAATTGTAAAATGTAGTCATTG 1538 |||| || ||||||||||||| |||| ||||||||||||||| ||||||||| Sbjct 1494 GACAGCGCTTTTTGAGTTTGGAAAGAGATCTTGTGGAGAAATTGTAAAATTTAGTCATTG 1553 Query 1539 AATTGATATTGTCT 1552 |||||||||||||| Sbjct 1554 AATTGATATTGTCT 1567 > AT3G11030.1 | Symbols: TBL32 | TRICHOME BIREFRINGENCE-LIKE 32 | chr3:3457227-3459380 REVERSE LENGTH=1509 Length=1509 Score = 392 bits (212), Expect = 5e-108 Identities = 762/1019 (75%), Gaps = 71/1019 (7%) Strand=Plus/Plus Query 484 AGAATGGGAGTGTCCGTACATTCAACCTCAGCTTACGTGTCAAG-A-ACACGGCCGTCCC 541 ||||| ||||||||||||||||| || ||||| || || | | | || ||||||||| Sbjct 452 AGAATCCGAGTGTCCGTACATTCAGCCGCAGCTCACTTG-C-CGCACGCATGGCCGTCCC 509 Query 542 GACAAAGATTACCAATTC-TGGCGGTGGCAACC-CAATCATTGC-GATCTTCCCTCGTTC 598 || | ||||| | | || ||| | |||| ||| | || ||| | ||||| ||||| Sbjct 510 GATAGTGATTATC-AGTCATGGAGATGGCGACCTGATTC-CTGCTCA-CTTCCTTCGTTT 566 Query 599 AACGCGTCGCTGATGCTGGAGA-CATTGAGAGGGAAGAGGATGATGTAT-GTAGGAGACT 656 || ||| || ||||| |||||| | || |||||||||| |||||||| | || ||||| | Sbjct 567 AATGCGACGGTGATGTTGGAGAGC-TTAAGAGGGAAGAAGATGATGT-TCGTTGGAGATT 624 Query 657 CATTAAACCGTGGAATGTTTGTATCGATGATTTGTCTTCTTCA-TCGTCTTATCCCTGAA 715 | || ||| | ||||||| ||| || | || ||||||||||| || | ||||| | | Sbjct 625 CGTTGAACAGAGGAATGTATGTTTCTCTCATCTGTCTTCTTCATTC-ACAAATCCCAG-A 682 Query 716 G-A-TCAGAAATCAATCAAAACCAAT-GGTTCCCTCACTGTCTTCACTGC-CAAGGAGTA 771 | | || ||||| || | | | | || || ||||| |||||| || | |||||| || Sbjct 683 GAACTC-CAAATCCATGGATA-CTTTCGGATCACTCACCGTCTTCTCT-CTCAAGGATTA 739 Query 772 TAACGCGACGATAGAGTTCTATTGGGCACCGTTTCTTCTAGAATCGAATTCAGACGATGC 831 || || ||||| ||||||||||||||||||||||||||||||||||||||||| | || Sbjct 740 CAATGCAACGATTGAGTTCTATTGGGCACCGTTTCTTCTAGAATCGAATTCAGATAACGC 799 Query 832 AATTGTCCATAGAATATCGGATAGGGTTGTGAGAAAAGGATCAATTAACAAACATGG-AC 890 || || |||||| |||| ||| | ||||||| |||||||| || |||||||| || | Sbjct 800 AACAGTTCATAGAGTATCAGATCGAATTGTGAGGAAAGGATCGATCAACAAACACGGTA- 858 Query 891 GGCACTGGAAAGGCG-TCGATATAATCGTATTCAACACTTATCTA-TGGTGGATGACTGG 948 |||| ||| ||| | | |||||| | || |||||||| || || ||||||| |||||| Sbjct 859 GGCATTGGCGAGGGGCT-GATATAGTTGTGTTCAACACATA-CTTGTGGTGGAGGACTGG 916 Query 949 ATTGAAGATGAACATCTTGCAAGGATCGTTTGCC-G-ATAAAGA-GAAGA-ATATCGTGG 1004 || || ||||| |||||| |||| || ||| | | || | || ||||| | ||||| | Sbjct 917 CTTCAAAATGAAGATCTTGGAAGGTTC-TTT-CAAGGATGA-GAAGAAGAGA-ATCGTTG 972 Query 1005 AGGTTTCGACTGAAGATGCATACCGGATGG-GTATGAAGAGTATG-TTGAGATGGGTGAA 1062 || | || ||||||||| || | |||| || |||||| |||| || | ||||||||| Sbjct 973 AGATGGAGAGTGAAGATGCTTATAGAATGGCGT-TGAAGACTATGGTTAA-ATGGGTGAA 1030 Query 1063 GAACAATATGGATCG-TAAGAAAACTAGGGTTTTCTTCACAAGCATGTCTCCTACTCATG 1121 ||| |||||||||| | ||| || ||||||||||| | | |||||||||||||||| Sbjct 1031 GAAGAATATGGATCCATT-GAAGACGAGGGTTTTCTTTGCTACCATGTCTCCTACTCATT 1089 Query 1122 CCAAGGGCATAG-ATTGGGGAGGTGGACCGGGTCAGAATTGCTATAATCAGACAACACTA 1180 ||||||| || |||||||||| | || || | ||||| || ||||| || |||| Sbjct 1090 ACAAGGGCG-AGGATTGGGGAGGCGAACAAGGAAAAAATTGTTACAATCAAACGACACCG 1148 Query 1181 ATAGAAGATCC-GAGCTATTGGGGATCAGATTGTCGG-AAAAG-TATAATGAAAGTGATT 1237 || |||| | || | ||||| |||||| || | | |||| | ||||||||||||| Sbjct 1149 ATCCAAGA-CATGAACCATTGGCCATCAGACTG-CAGCAAAACCT-TAATGAAAGTGATA 1205 Query 1238 GGAGAAGTGTTTGG--AA-GATC-GAAAACACCAATAACGTTACTGAACATAACGCAGA- 1292 ||||| | || | || || | || || | ||| |||| ||||| || || | Sbjct 1206 GGAGAGGAATTAGACCAAAGAGCAGAGTTT-CCGGTGACGGTACTTAACATTACACA-AC 1263 Query 1293 TGTC-GAATTATAGGAAAGATGCTCATACGTCGATATACAAGAAGCAGTGGAGTCCACTT 1351 | || | | || ||||||| || || ||||| || ||||||||||| ||||| ||| || Sbjct 1264 TCTCTGGCT-ATCGGAAAGACGCGCACACGTCAATCTACAAGAAGCAATGGAGCCCA-TT 1321 Query 1352 -AC-AGCGGAGCAGCTGG-AGAATCCAACGAGCTA-TGCGGATTGTGTACACTGGTGCTT 1407 || | ||||||||| | | ||||| | ||||| | | || ||| |||| |||||||| Sbjct 1322 GACGAA-GGAGCAGCTAGCA-AATCCGGCTAGCTACT-CAGACTGTATACATTGGTGCTT 1378 Query 1408 GCCTGGCCTTCAAGATACTTGGAATGAGCTTCTCTTTGCTAAACT-TTTCTATCCTTGA 1465 |||||| ||||||||||||||||| |||||| ||||||| || | ||| ||||| ||| Sbjct 1379 GCCTGGTCTTCAAGATACTTGGAACGAGCTTTTCTTTGCCAAGTTATTT-TATCCATGA 1436 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76606031670 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5