BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483095
Length=2415
Score E
Sequences producing significant alignments: (Bits) Value
AT2G40400.1 | Symbols: | Protein of unknown function (DUF399 a... 3773 0.0
AT3G56140.1 | Symbols: | Protein of unknown function (DUF399 a... 1986 0.0
> AT2G40400.1 | Symbols: | Protein of unknown function (DUF399
and DUF3411) | chr2:16869334-16872757 FORWARD LENGTH=2425
Length=2425
Score = 3773 bits (2043), Expect = 0.0
Identities = 2307/2430 (95%), Gaps = 35/2430 (1%)
Strand=Plus/Plus
Query 1 AGCAATGCAAAAAGCTGACGTGTACCAATGAAGCCCACGACCAA---TGGGCTCTTGGCT 57
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3 AGCAATGCAAAAAGCTGACGTGTACCAATGAAGCCCACGACCAATGGTGGGCTCTTGGCT 62
Query 58 TC-C--TC--C-T--T-C--C-CGTTTCCGAGATTCCGCGGCCAACTTCCGATTATCTTC 105
|| | || | | | | | ||||||||||||||||||||||||||||||||||||||
Sbjct 63 TCTCAATCATCTTCCTCCTTCTCGTTTCCGAGATTCCGCGGCCAACTTCCGATTATCTTC 122
Query 106 TCAGCCAATAATAATCAGAAGACGAAGAAGTATTTCCCAAATCCAAACGTCGTCACTCTT 165
|||||||||||||||||||||| |||||| | || ||||||||||||||||||||||||
Sbjct 123 TCAGCCAATAATAATCAGAAGAAGAAGAA-T-CTT-CCAAATCCAAACGTCGTCACTCTT 179
Query 166 TGCCTCCACTCTGATTCCGATGTCTCTTCCTCTCAAATCGCCGTCACTCGCCGCGCAATT 225
|| ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 180 TGTCTCCACTCTCATTCCAATGTCTCCTCCTCTCAAATCGCCGTCACTCGCCGCGCAATT 239
Query 226 CTCGTCGCACCACCGCTCCTCGCCGCCGCTGCTTCGTTGTTTCTCTCTATTTCCTCAGCT 285
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 240 CTCGTCGCACCACCGCTCCTCGCCGCCGCCGCTTCGTTGTTTCTCTCTATTTCCTCAGCT 299
Query 286 GCTTCTGCTGAGACTTC-GACGGAATCAGTAGCTCTTCCTCCTCCTCCTCCTGTTGCCGT 344
|| |||||||||||||| | |||||||||||| || || ||||||||||| | |
Sbjct 300 GCCTCTGCTGAGACTTCTG-CGGAATCAGTAG------CT-CT--TCCTCCTGTTG-C-T 347
Query 345 CACTGCTCCACCTCCGCCGCCTGTGGAGAAGGAAGAGTTGATAACTTCTAGAATCTATGA 404
|||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 348 -ACTGCTCCTCCTCCTCCGCCTGTGGAGAAGGAAGAGGCGATAACTTCTAGAATCTATGA 406
Query 405 CGCGTCTGTGCTTGGTGAGCCGATGGCTGTTGGGAAAGATAAGAAGAGAGTTTGGGAGAA 464
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 407 CGCGTCTGTGCTTGGTGAGCCGATGGCTGTTGGGAAAGATAAGAAGAGAGTGTGGGAGAA 466
Query 465 GTTGTTGAATGCGAGGATTGTGTATCTCGGAGAAGCAGAACAAGTGCCTACAAGAGACGA 524
| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 467 GCTATTGAATGCGAGGATTGTCTATCTCGGAGAAGCAGAACAAGTGCCTACAAGAGACGA 526
Query 525 CAAGGTTCTTGAGCTCGAAATCGTGAGGAATTTGAGGAAGCGATGTATCGAGAGCGATCG 584
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 527 CAAGGTTCTCGAGCTCGAAATCGTGAGGAATTTGAGGAAGCGATGTATTGAGAGCGATCG 586
Query 585 TCAGTTATCTTTAGCATTGGAAGCATTTCCTCTTGATTTGCAGGAACAGTTAAACCAATA 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 TCAGTTATCTTTAGCATTGGAAGCATTTCCTCTTGATTTGCAGGAACAGTTAAACCAATA 646
Query 645 CATGGATAAGAGGATGGATGCAGAGGTTTTGAAGTCGTATGTGTCACATTGGCCAGTTCA 704
|||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||| ||
Sbjct 647 CATGGACAAGAGGATGGATGGAGAGGTATTGAAGTCGTATGTATCACATTGGCCAGTCCA 706
Query 705 ACGTTGGCAAGAGTATGAGCCTCTGTTAAGTTACTGTCGCCAAAACGCAGTTAAACTCAT 764
|||||||||||||||||||||||| ||||||||||| ||| | |||| ||||||||||||
Sbjct 707 ACGTTGGCAAGAGTATGAGCCTCTCTTAAGTTACTGCCGCGATAACGGAGTTAAACTCAT 766
Query 765 TGCTTGCGGCACTCCGCTCAAGGTTTTAAGAACTGTCCAAGCTGAGGGTATCCGTGGCCT 824
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 767 TGCTTGTGGCACTCCGCTCAAGGTTTTAAGAACTGTCCAAGCTGAGGGTATCCGTGGTCT 826
Query 825 ATCAGATTCTGAGCGTAAATTATACACTCCTCCTGCGGGTTCAGGGTTTATCTCAGGGTT 884
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 827 ATCAGAGTCTGAGCGTAAATTATACACTCCTCCTGCGGGTTCAGGGTTTATCTCAGGGTT 886
Query 885 TACTTCCTTCTCACGTAGTTCTTCACTCAATATGAATCCCCTCACACAGATTGTTCCATT 944
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 887 TACTTCCTTCTCACGTAGTTCTTCACTCAATATGAATCCACTCACACAGATTGTTCCATT 946
Query 945 TGGACCGAGTTCTTATTTGTCGGCGCAAGCTAGAGTTGTTGAAGACCATACTATGTCACA 1004
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||
Sbjct 947 TGGACCGAGTTCTTATTTGTCGGCACAAGCTAGAGTTGTTGAAGACCATACAATGTCTCA 1006
Query 1005 AGTTATTTTACAAGCAGTTGCAGATGGAGGTGGAACTGGTCTGCTTTTAGTGGTGACAGG 1064
||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1007 AGTTATTGTACAAGCAGTTGCAGATGGAGGTGGAACTGGTATGCTGGTAGTGGTGACAGG 1066
Query 1065 GGCAAACCATGTTGAGTATGGGTCAAGAGGAACAGGCTTGCCTGCAAGGATCTCTAGGAA 1124
||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct 1067 GGCAAACCATGTTGAGTATGGGTCAAGGGGAACAGGATTGCCGGCAAGGATCTCTAGGAA 1126
Query 1125 AATTCCCAAGAAAAGTCAACTTGTTGTATTACTTGATCCTGAAAGGCAGTTCTTGCGGAA 1184
||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 1127 GATTCCGAAGAAAAGTCAACTTGTTGTGTTACTTGATCCTGAAAGACAGTTTTTGCGGAA 1186
Query 1185 AGAGGGTGAATCTCCAGTTGCTGATTTCTTGTGGTATTCTGTGGCCAGACCCTGCAGCAG 1244
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1187 AGAGGGTGAATCTCCAGTTGCTGATTTCTTGTGGTATTCTGCGGCCAGACCCTGCAGCAG 1246
Query 1245 AAACTGCTTTGACCGAGCAGAAATCGCTCGTGTAATGAATGCAGCTGGTAGGAGACGAGA 1304
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1247 AAACTGCTTTGACCGAGCAGAAATCGCTCGGGTAATGAATGCGGCTGGTAGGAGACGAGA 1306
Query 1305 TGCCCTTCCCCAAGACATTCAAAAAGGATTAGACCTTGGTCTGGTGTCACCTGAGATTCT 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1307 TGCCCTTCCCCAAGACATTCAAAAAGGATTAGACCTTGGTCTGGTGTCACCTGAGATTCT 1366
Query 1365 GCAGAATTTCTTTGATTTGGAGCAATATCCTCTTATTTCAGAGTTTACAAAACGGTTCCA 1424
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1367 GCAGAATTTCTTTGATTTGGAGCAATATCCTCTTATTTCAGAGCTTACACAACGGTTCCA 1426
Query 1425 GGGTTTCCGAGAAAGGTTGTTGGCAGACCCCAAATTCTTGAATAGATTAGCTATTGAAGA 1484
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1427 GGGATTCCGAGAAAGGTTGTTGGCAGATCCCAAATTCTTGAATAGATTAGCTATTGAAGA 1486
Query 1485 AGCTATATCGATAACAACGACACTTGTAGCTCAATATGAGAAGCGGAAAGAAAACTTCTT 1544
||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1487 AGCTATATCAATAACAACAACACTTGTAGCTCAATATGAGAAGCGGAAAGAAAATTTCTT 1546
Query 1545 TGAAGAACTCGACTATGTTATTACTGATAGCGTAAGAGCATCAGTTGTTGATTTTTTCAC 1604
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1547 TGAAGAACTCGACTATGTGATCACTGATAGCGTAAGAGCATCAGTTGTTGATTTTTTCAC 1606
Query 1605 AGTTTGGCTGCCTGCACCAACCTTGTCTTTTATCTCATACGCTGATGAGACAATTGGACC 1664
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1607 AGTTTGGCTCCCTGCACCAACCTTGTCTTTTATCTCATATGCTGATGAGACAATTGGGCC 1666
Query 1665 AAACAGCATAGATGCCCTAAAAGACCTCCTAGGATCCATACCTGACAATGCATTTCAAAA 1724
|||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||
Sbjct 1667 AAACAGCATAGATGCCTTAAGAGGCCTCCTAGGGTCCATACCTGACAATGCATTTCAAAA 1726
Query 1725 AAGTCTTGGTGGACAAGAGTGGACTCTGAATCTTAGGATTGCTTCAGTTATTGTCGGTGG 1784
|||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 1727 AAGTCTAGGTGGACAAGAGTGGACTCTGAGTCTTAGGATTGCTTCAGTTATTATCGGTGG 1786
Query 1785 CTTGAAGCTTGCTGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGATCTTCAAATGC 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1787 CTTGAAGCTTGCTGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGATCTTCAAATGC 1846
Query 1845 TTTGTATGCAATACGAAAATTCATTAAACCAGAGTTGGGTGTTGGTGAGCAAGCAAAGAG 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1847 TTTGTATGCAATACGAAAATTCATTAAACCAGAGTTGGGTGTTGGTGAGCAAGCAAAGAG 1906
Query 1905 GTCTCCTATGCTGAAGACGGCCCTTGTGTATGGAGGTTATCTGGGAACATCTTCAAATAT 1964
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1907 GTCTCCTATGCTGAAGACGGCCCTTGTGTATGGAGGTTATCTGGGAACATCTTCGAATAT 1966
Query 1965 CCGTTATCAGATAATCGCTGGGTTAATAGAGCATCGCATTTCTGACGAGCTTTCTTCTCA 2024
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1967 CCGTTATCAGATAATTGCTGGGTTAATAGAGCATCGCATTTCTGACGAGCTTTCTTCTCA 2026
Query 2025 ACCTCTACTTGTAAACATGATTTCATTTGTTGTTCGAGTAGCTAACTCCTACTTTGGAAC 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2027 ACCTCTACTTGTAAACATGATTTCATTTGTTGTTCGAGTAGCTAACTCCTACTTTGGAAC 2086
Query 2085 TCAGCAATGGATTGATCTTGCGCGCTCTACGGGTCTGCAGACTCAGAAAAGTGTCGCAAC 2144
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 2087 TCAGCAATGGATTGATCTTGCGCGCTCTACGGGTCTGCAAACTCAGAAAAGTGTCACAAC 2146
Query 2145 TTCCAACCAAATCCCCGAGGTTGGGAGCCAATCTACAGTGGAATACAGTACAACTGAAGA 2204
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 2147 TTCCAACCAAATCCCCGAGGTTGCGAGCCAATCCACAGTGGAATACAGTACAACTGAAGA 2206
Query 2205 GGCAAGTATCGATGATCTCAAGAATCAATGATATTTATGCGGCTATGTGTCTAGGTACCA 2264
||||||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||
Sbjct 2207 GGCAAGTATGGATGATCTTAAGAATCAATGAGATTTATGCGGCTATGTGACTAGGTACCA 2266
Query 2265 ACTGGTATATGTTTATAAAAGCTTTTTGGTCGTATTGGAGGGAAATATATATTCATTTGA 2324
| || ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||
Sbjct 2267 ATTG-TATATGTTTATAAAAGCTTTT-GATCGTATTGGAGGGAAAGATATATTCATTTGA 2324
Query 2325 GTTGTATTTT-GTATCTTAGCTTATGGGAAATAATGATTCGTGAATAAAATCTCTTCAAT 2383
|||||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||||||
Sbjct 2325 GTTGTATTTTTGTATCTTAGCTTACGGGAAACAATGATTCGTGAATAAAATTTCTTCAAT 2384
Query 2384 TAGTCATGTTGATTTGCAATAATTGCACAT 2413
||||||||||| ||||| ||| ||||||||
Sbjct 2385 TAGTCATGTTGGTTTGCCATATTTGCACAT 2414
> AT3G56140.1 | Symbols: | Protein of unknown function (DUF399
and DUF3411) | chr3:20829282-20832871 FORWARD LENGTH=2565
Length=2565
Score = 1986 bits (1075), Expect = 0.0
Identities = 1675/1961 (85%), Gaps = 56/1961 (3%)
Strand=Plus/Plus
Query 305 CGGAATCAGTAGCTCTTCCTCCTCCTCCTCCTGTTGC-CGTCACTGCTCCACCTCCGCCG 363
||||||||| ||||| ||||||||||||| | | | | ||| | | | || || ||
Sbjct 433 CGGAATCAGCAGCTCCTCCTCCTCCTCCTGC-G-ACCACAACACCG-T-CGCCGCCTCCA 488
Query 364 CCTGTGGAGAAGGAAGAGTTGATAACTTCTAGAATCTATGACGCGTCTGTG-C-TTGGTG 421
|| ||| | ||||||||| |||||| || ||||||||||||||| | | | | ||||||
Sbjct 489 CCCGTGAATAAGGAAGAGACGATAACCTCGAGAATCTATGACGCGAC-G-GCCATTGGTG 546
Query 422 AGCCGATGGCTGTTGGG-AAAGATAAGAAG-AGAGTTTGGGAGAAGTTGTTGAATGCGAG 479
||||||||||| |||| |||||||||||| || || ||||||||| ||||||| ||||
Sbjct 547 AGCCGATGGCT-ATGGGAAAAGATAAGAAGAAG-GTGTGGGAGAAGCTGTTGAACGCGA- 603
Query 480 GA-TTGTGTATCTCGGAGAAGCAGAACAAGTGCCTA-CAAGAGACGACAAGGTTCTTGAG 537
|| ||||||| ||||| || || || |||||||||| ||| ||||||||| | |||||
Sbjct 604 GAGTTGTGTACCTCGGTGAGGCGGAGCAAGTGCCTACCAA-AGACGACAAAGAGCTTGAA 662
Query 538 CTCGAAATCGTGAGGAATTTGAGGAAGCGATGTATCGAGAGCGATCGTCAGTTATCTTTA 597
||||||||||| || || |||||||| |||| | |||||||| ||||| | ||| ||
Sbjct 663 CTCGAAATCGTTAGAAACCTGAGGAAGAGATGCGTTGAGAGCGAGCGTCAAATCTCTGTA 722
Query 598 GCATTGGAAGCATTTCCTCTTGATTTGCAGGAACAG-TTAAACCAATACATGGATAAGAG 656
||| |||||||||| ||||| ||||||||||| ||| || || |||||||||||||||||
Sbjct 723 GCACTGGAAGCATTCCCTCTCGATTTGCAGGATCAGCTT-AATCAATACATGGATAAGAG 781
Query 657 GATGGATGCAGAGGTTTTGAAGTCGTATGTGTCACATTGGCCAGTTCAACGTTGGCAAGA 716
|||||| | |||| |||||||| |||||| |||||||||| | |||||||||||||||
Sbjct 782 GATGGACGGAGAGACATTGAAGTCTTATGTGACACATTGGCCTGCTCAACGTTGGCAAGA 841
Query 717 GTATGAGCCTCTGTTAAGTTACTGTCGCCAAAACGCAGTTAAACTCATTGCTTGCGGCAC 776
||||||||||| |||||||| || ||| | ||| | |||| ||| |||||||| |||||
Sbjct 842 ATATGAGCCTCTTTTAAGTTATTGCCGCGATAACTCTGTTAGACTAATTGCTTGTGGCAC 901
Query 777 TCCGCTCAAGGTTTTAAGAACTGTCCAAGCTGAGGGTATCCGTGGCCTATCAGATTCTGA 836
||| |||||||||||||||||||||||||| || ||||||||||| || ||| | |||||
Sbjct 902 TCCTCTCAAGGTTTTAAGAACTGTCCAAGCAGAAGGTATCCGTGGTCTTTCAAAATCTGA 961
Query 837 GCGTAAATTATACACTCCTCCTGCGGGTTCAGGGTTTATCTCAGGGTTTACTTCCTTCTC 896
|||||||||||||||||| ||||| ||||| |||||||||||||| ||| |||| |||||
Sbjct 962 GCGTAAATTATACACTCCCCCTGCTGGTTCTGGGTTTATCTCAGGATTTTCTTCATTCTC 1021
Query 897 ACGTAGTTCTTCACTCAATATGAATC-CCCTCACACAGATTGTTCCATTTGGACCGAGTT 955
|||||| ||| || || |||||| || ||| |||||||||||||| |||||||||||||
Sbjct 1022 ACGTAGATCTACATTCGATATGAGTCTCCC-AACACAGATTGTTCCTTTTGGACCGAGTT 1080
Query 956 CTTATTTGTCGGCGCAAGCTAGAGTTGTTGAAGACCATACTATGTCACAAGTTATTTTAC 1015
| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1081 CATATTTGTCGGCACAAGCAAGAGTTGTTGAAGACCATACAATGTCACAAGTTATTTTAC 1140
Query 1016 AAGCAGTTGCAGATGGAGGTGGAACTGGTCTGCTTTTAGTGGTGACAGGGGCAAACCATG 1075
||||||| ||||||||||| || |||||||| || ||||||||||||||||||| ||||
Sbjct 1141 AAGCAGTAGCAGATGGAGGGGGTACTGGTCTACTGTTAGTGGTGACAGGGGCAAGTCATG 1200
Query 1076 TTGAGTATGGGTCAAGAGGAACAGGCTTGCCTGCAAGGATCTCTAGGAAAATTCCCAAGA 1135
|||||||||| |||||||||||||| ||||| ||||||||||| ||||| |||| ||||
Sbjct 1201 TTGAGTATGGTTCAAGAGGAACAGGTTTGCCAGCAAGGATCTCAAGGAAGTTTCCAAAGA 1260
Query 1136 AAAGTCAACTTGTTGTATTACTTGATCCTGAAAGGCAGTTCTTGCGGAA-AGAGGGTGAA 1194
||| ||| |||||||||||||||| |||||||| |||||||||| ||| |||||| |||
Sbjct 1261 AAAACCAAGTTGTTGTATTACTTGACCCTGAAAGACAGTTCTTGC-GAAGAGAGGGCGAA 1319
Query 1195 TCTCCAGTTGCTGATTTCTTGTGGTATTCTG-TGGCCAGACCCTGCAGCAGAAACTGCTT 1253
|||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||
Sbjct 1320 ACTCCAGTTGCTGATTTCTTGTGGTATTCTGCT-GCAAGACCCTGCAGTAGAAACTGCTT 1378
Query 1254 TGACCGAGCAGAAATCGCTCGTGTAATGAATGCAGCTGGTAGGAGACGAGATGCCCTTCC 1313
|||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct 1379 TGACCGAGCAGAGATTGCTCGAGTAATGAATGCAGCTGGCAGGAGGCGAGATGCCCTTCC 1438
Query 1314 -CCAAGACATTCAAAAAGGATTAGACCTTGGTCTGGTGTCACCTGAGATTCTGCAGAATT 1372
|| || |||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1439 TCC-CGATATTCAAAATGGATTAGACCTTGGTCTGGTGTCACCTGAGGTTCTGCAGAATC 1497
Query 1373 TCTTTGATTTGGAGCAATATCCTCTTATTTCAGAGTTTACAAAACGGTTCCAGGGTTTCC 1432
|||||||||||||||| |||||||||||||| ||| |||| | ||||| ||||||||||
Sbjct 1498 TCTTTGATTTGGAGCAGTATCCTCTTATTTCTGAGCTTACTCAGCGGTTTCAGGGTTTCC 1557
Query 1433 GAGAAAGGTTGTTGGCAGACCCCAAATTCTTGAATAGATTAGCTATTGAAGAAGCTATAT 1492
||||||||||||||||||| || |||||| ||||||| ||||| || |||||||||||||
Sbjct 1558 GAGAAAGGTTGTTGGCAGATCCAAAATTCCTGAATAGGTTAGCCATCGAAGAAGCTATAT 1617
Query 1493 CGATAACAACGACACTTGTAGCTCAATATGAGAAGCGGAAAGAAAACTTCTTTGAAGAAC 1552
| |||||||| ||||| |||| |||||||||||||| ||||| || ||||||||||||
Sbjct 1618 CAATAACAACTACACTAATAGCACAATATGAGAAGCGAAAAGAGAATTTCTTTGAAGAAA 1677
Query 1553 TCGACTATGTTATTACTGATAGC-GTAAGAGCATCAGTTGTTGATTTTTTCACAGTTTGG 1611
| ||||||||||| ||||||| | || |||| |||||| |||||||||||||||||||||
Sbjct 1678 TTGACTATGTTATAACTGATA-CAGTGAGAGGATCAGTCGTTGATTTTTTCACAGTTTGG 1736
Query 1612 CTGCCTGCACCAACCTTGTCTTTTATCTCATACGCTGATGAGACAATTGGACCAAACAGC 1671
|| ||||||||||| ||||||||| | ||||| ||||||||||| | ||||||| |||||
Sbjct 1737 CTTCCTGCACCAACTTTGTCTTTTCTTTCATATGCTGATGAGACCACTGGACCAGACAGC 1796
Query 1672 ATAGATGCCCTAAAAGACCTCCTAGGATCCATACCTGACAATGCATTTCAAAAAAGTCTT 1731
||||| ||||| | || ||||||||||||||||||||| || ||||||||||||||||||
Sbjct 1797 ATAGACGCCCTGAGAGGCCTCCTAGGATCCATACCTGATAACGCATTTCAAAAAAGTCTT 1856
Query 1732 GGTGGACA-AGAGTGG-ACTCTGAATCTTAGGATTGCTTCAGTTATTGTCGGTGGCTTGA 1789
| |||| | ||||||| || ||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1857 GCTGGA-AGAGAGTGGAAC-CTGAATCTTAGAATTGCTTCAGTTATTGTTGGTGGCTTGA 1914
Query 1790 AGCTTGCTGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGATCTTCAAATGCTTTGT 1849
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1915 AGCTTGCTGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGAGCTTCAAATGCATTGA 1974
Query 1850 ATGCAATACGAAAATTCATTAAACCAGAGTTGGGTGTTGG-TGAGCAAGCAAAGAGGTCT 1908
|| | |||||| |||||||||| ||| ||| ||| || |||| || | |||||||||
Sbjct 1975 ATATAGCACGAAAGGTCATTAAACCCGAGCTGGTTGT-GGCTGAGAAACCTAAGAGGTCT 2033
Query 1909 CCTATGCTGAAGACGGCCCTTGTGTATGGAGGTTATCTGGGAACATCTTCAAATATCCGT 1968
||| | ||||||||||| | || || ||||||| ||||||||||||| ||||| | |||
Sbjct 2034 CCTCTTCTGAAGACGGCAATGGTTTACGGAGGTTTTCTGGGAACATCTGCAAATCTTCGT 2093
Query 1969 TATCAGATAATCGCTGGG-TTAATAGAGCATCGCATTTCTGACGAGCTTTCTTCTCAACC 2027
|| |||||||| || ||| ||||||||||||||| | ||||| ||||||||||| |||||
Sbjct 2094 TACCAGATAATTGC-GGGATTAATAGAGCATCGCCTATCTGATGAGCTTTCTTCGCAACC 2152
Query 2028 TCTACTTGTAAA--CATGATTTCATTTGTTGTTCGAGTAGC-TAA-CTCCTACTTT-GGA 2082
|||||||||||| | | |||||||||||||| | || | | ||| ||| || ||| |||
Sbjct 2153 TCTACTTGTAAATGC-T-ATTTCATTTGTTGT-C-AGGACCCTAAACTCATA-TTTCGGA 2207
Query 2083 ACTCAGCAATGGATTGATCTTGCGCGCTCTACGGGTCTGCAGACTCAGAAAAGTGTCGCA 2142
|| ||||||||||| |||||||| ||||||||||||||||| ||||||||||| || ||
Sbjct 2208 ACGCAGCAATGGATCGATCTTGCACGCTCTACGGGTCTGCAAACTCAGAAAAGCATCCCA 2267
Query 2143 ACTTCCAACCAAATCCCCGAGG-TTGGGA-GCCAATCTACAGTGGAATAC-AGTAC-A-- 2196
| || || |||| | |||| || ||| | || | |||||||||| | | ||| |
Sbjct 2268 GCCTCTAAAGAAATTTCAGAGGCTTTGGAAG--AACCGACAGTGGAATGCGA-TACTACT 2324
Query 2197 ACTGAAGAGGCAAGTATCGATGATCTCAAGAATCAATGATA 2237
|||||||||| |||||||||| | ||||| |||||||||||
Sbjct 2325 ACTGAAGAGGAAAGTATCGATAAGCTCAATAATCAATGATA 2365
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119929102005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5