BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483106
Length=1678
Score E
Sequences producing significant alignments: (Bits) Value
AT2G40480.1 | Symbols: | Plant protein of unknown function (DU... 2429 0.0
AT3G56270.1 | Symbols: | Plant protein of unknown function (DU... 436 2e-121
> AT2G40480.1 | Symbols: | Plant protein of unknown function (DUF827)
| chr2:16910364-16912592 FORWARD LENGTH=1766
Length=1766
Score = 2429 bits (1315), Expect = 0.0
Identities = 1535/1642 (93%), Gaps = 11/1642 (1%)
Strand=Plus/Plus
Query 2 TGGCAGAGGAGCAGCATCAGAATTATCCTGTGGCTGAGGCGATTCCGGGTACGCCTGGGA 61
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 69 TGGCAGAGGAGCAGCATCAGAATTATCATGTGGCTGAGGCGATTCCGGGTACGCCTGGGA 128
Query 62 TCCACGAAGTGAGGATCCAACCCGGGTCTGAGAATTTCGGGTTCTGTGTTGATTCGGTTG 121
|||| || || ||||| |||||||| |||||||||| |||||||||||||||| ||||||
Sbjct 129 TCCATGATGTCAGGATTCAACCCGGTTCTGAGAATTCCGGGTTCTGTGTTGATCCGGTTG 188
Query 122 GTGTTTCTAATGTACCTGGAATTAGGAGAGTTGGTTTGAGAGCTGAAATCGATACTTCTC 181
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 189 GTGTTTCTAATGTACCTGGAATTAGGAGAGTTGGGTTGAGAGCTGAAATCGATACTTCTC 248
Query 182 CTCCATTCGGGTCGGTTCAGGAGGCGGTGACCCGATTCGGTGGTCGTGGTTATTGGGTTC 241
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 249 CTCCATTCGGATCGGTTCAGGAGGCGGTGACTCGATTCGGTGGTCGTGGTTATTGGGTTC 308
Query 242 CTTTCAAGCTTGAAGACAGTTTCAATGGAGAATTTGACATAAAGAGAATGGAAGAGCATG 301
||||||||||||| |||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct 309 CTTTCAAGCTTGATGACACTTTCAATGGTGAATTTGACATTAAGAGAATGGAGGAGCATG 368
Query 302 CAGCGGAGCTTGAGAAGGATCTGATTGTGAAAGAGCTTGAAACTTTGGATGTTCTGGAAG 361
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 369 CAGCGGAGCTTGAGAAGGATCTGATTGTGAAAGAGCTTGAAACTTTGGATGTTTTAGAAG 428
Query 362 CACTTGGATCAACGAAAAGGATCGTTGAAGATTTGAAGCGGCAGCTTCAGCAAGAAGCCC 421
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 429 CTCTTGGATCAACCAAAAGGATCGTTGAAGATTTGAAGCGGCAGCTTCAGCAAGAAGCAC 488
Query 422 TGAGATGCACTGAACATCTCAGTTCAGATATCAAAGAGATGAACGATGAGCATTGCCATC 481
|||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 TGAGATGCTCTGACCAACTCAGTTCAGATATCAAAGAGATGAACGATGAGCATTGCCATC 548
Query 482 ACAATCCTATTCCTATGTCATCTCCTGATCTGATCTTGATGGAATTGAAGCAAGCCAAGA 541
||||| | || ||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct 549 ACAAT-C----CC-ATGTCATCTCCTGATTTGATCTTGATGGAATTGAAGCAAGCTAAGA 602
Query 542 TGAATCTTGGTAAAACCATGGATGATCTTGTACTGATCCAATCCTCTGTTGAGTCTCTCA 601
|||||||||||||||||||||| | |||||| ||||||| ||||||||||| ||||| |
Sbjct 603 TGAATCTTGGTAAAACCATGGACAACCTTGTAGTGATCCAGTCCTCTGTTGAATCTCTGA 662
Query 602 ATAAGAAGATGAAGGAAGAGAAAGATTTCCTTGAGAAGACACGAGCGAAGCTAACTTATG 661
||||||| ||||| ||||||||||| ||||||||||||||||| || |||||||| ||||
Sbjct 663 ATAAGAAAATGAAAGAAGAGAAAGACTTCCTTGAGAAGACACGGGCTAAGCTAACGTATG 722
Query 662 GGTTTGGAGGACCGGTGTCTCTAGCTGAGGAGCTGAGTCGGATTAAGGTAAAACCACAAG 721
||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 723 GGTTTGGTGGACCGGTATCTCTAGCTGAGGAGTTGAGTCGGATTAAGGTAAAACCACAGG 782
Query 722 TTCCAGATGAACCACTAAGGGAACAGGTTAAGATGGTTGCTGAAACCGATGAAACGGGGT 781
||| ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |
Sbjct 783 TTCAAGATGAACCGTTAAGGGAGCAGGTTAAGATGGTTGCTGAAGCCGATGAAACGGGTT 842
Query 782 TAAACCTGCAGAACAAGAACCGTCTGAGAACTGCAGAGATGAGATTGGTTGCTGCTAGAA 841
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 843 TAAACCTGCAGAACAAGAACAGTCTGAGAACTGCAGAGATGAGATTGGTTGCTGCTAGGA 902
Query 842 AAATGGAAGAAGCTGC-AAGAGCAGCGGAAGCACTTGCGATTGCTGAAATTACAATGTTA 900
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 903 AAATGGAAGAAGCTGCGAA-AGCAGCGGAAGCACTTGCGATTGCTGAAATTACAATGTTA 961
Query 901 TCATCCAACGGTGAAAGCCAAGACGATGATTCGGAATTTTGCTTTCCAGAGCCTCCAAGA 960
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 962 TCATCCAATGGTGAAAGCCAGGACGATGATTCGGAATTTTGCTTTCCAGAGCCTCCAAGA 1021
Query 961 TCTCCCGTAACACCGAGAGGACTAAGGATTGATAATGACTTCTCCACCGATAATAGCTCA 1020
||||| || ||||| |||||||| ||||||||||||||||||||||| ||||| || |||
Sbjct 1022 TCTCCTGTGACACCAAGAGGACTCAGGATTGATAATGACTTCTCCACGGATAAGAGTTCA 1081
Query 1021 AGAAGAGGAATTTTAAAGAAGCTTGAGGAAGCTACCGAAGGAGTTAAACAAAGTAAACAA 1080
||| |||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1082 AGACGAGGGATTTTGAAGAAGCTTGAGGAAGCTACTGAAGGAGTTAAACAAAGTAAGCAG 1141
Query 1081 GCTTTAGAAGCTGCGTTAAACCGAGTAGAGATTGCTAATGTGAAGCAACTTGCAGCTGAA 1140
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1142 GCTTTAGAAGCTGCGTTAAACCGAGTAGAGATCGCTAATGTGAAGCAACTTGCAGCTGAA 1201
Query 1141 AATGCTTTCCGTGGGTGGACAAAAGACTCATCGAAAGGCGATAATTTTACACCTTTGAAT 1200
||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 1202 AATGCTTTCCGCGGGTGGACAAAAGACTCATTGAAAGGCGATAACTTTACACCTTTGAAT 1261
Query 1201 CATACCCGACGCTCCTTTTTCAGCCATTTGAACAAGCATCATGAGCCACTTGACAACCTC 1260
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 1262 CATACCCGACGCTCCTTTTTCAGCCATTTGAACAAGCATCACGAGCCACTTGACATTCTC 1321
Query 1261 CCAAAGCCAGTGTTGAAGTCTAACGTCTCAATGCGTGATGTTCTAAGGCGTAAGCAAGTT 1320
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1322 CCAAAGCCAGTGTTAAAGTCTAATATCTCAATGCGTGATGTTCTAAGGCGTAAGCAAGTT 1381
Query 1321 CCAAAGGAAGATGTTGTTGCTCCCCAAAGGCAGAGCCTTGAAGGGCAAATCCCAAGGCGG 1380
||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1382 CCAAAGGAAGATGTTGTTGCTCCCCAAAGACAGAGCCTTGAAGGGCAAATACCGAGGCGA 1441
Query 1381 AATGCGAATTTGAGCCAAATGTTGAAGGAGTTGAAGCAGGATGTGAAGTTTTCAACACGG 1440
|||| |||||||||||||||||||||||| | |||||||||||||||||||| |||||
Sbjct 1442 AATGTGAATTTGAGCCAAATGTTGAAGGAACTAAAGCAGGATGTGAAGTTTTCGGCACGG 1501
Query 1441 GCCGAGAAAGAGGAGGTACATGAAGAGAAACAGTATGTCACGCAGAGGAGAAAGTTTGGG 1500
| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1502 GGAGAGAAAGAGGAGGTACATGAAGAGAAACAGTACGTCACGCAGAGGAGAAAGTTTGGG 1561
Query 1501 TTCATACACATTACACTTCCATTGCAGAAGCAGAGCAAGAAAAAATCCAGCCTTTAAAAA 1560
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1562 TTCATACACATTACACTTCCACTGCAGAAGCAGAGCAAGAAAAAATCCAGCCTTTAAAAA 1621
Query 1561 CAACAACACCTTCAACTATTTCTATTTCTAGTCattattatt-tgtttgtaattggtttt 1619
||| | ||||| | ||||||||||||| ||||| |||||| | |||||||||||||||||
Sbjct 1622 CAA-A-CACCTCCCACTATTTCTATTTTTAGTCCTTATTAATGTGTTTGTAATTGGTTTT 1679
Query 1620 cattttggtttgatgtggtgtt 1641
|||||||||||||| |||||||
Sbjct 1680 CATTTTGGTTTGATATGGTGTT 1701
> AT3G56270.1 | Symbols: | Plant protein of unknown function (DUF827)
| chr3:20870000-20872049 FORWARD LENGTH=1756
Length=1756
Score = 436 bits (236), Expect = 2e-121
Identities = 761/1000 (76%), Gaps = 93/1000 (9%)
Strand=Plus/Plus
Query 220 GGTGGTCGT-GGTTATTGGGTTCCTTTCAAGCTTGAAGACAGTTTC-A----AT-GGAGA 272
||||||||| |||| |||||||| ||||| |||||||||| || | | | |||||
Sbjct 377 GGTGGTCGTGGGTT-CTGGGTTCCCTTCAATCTTGAAGACAATTACGACTGTGTGGGAGA 435
Query 273 ATTTGACATAAAGAGAATGGAAGAGCATG-CAGCGGAGCTTGAGAAGGATCTGATTGTGA 331
|||||||||||||||||||||||| || | ||| |||||||||||||||||||||| |||
Sbjct 436 ATTTGACATAAAGAGAATGGAAGAACA-GACAGTGGAGCTTGAGAAGGATCTGATTATGA 494
Query 332 AAGAGCTT-GAAACTTTGGATGTTCTGGAAGCACTTGGATCAACGAAAAGGATCGTTGAA 390
||||| || || ||| ||||| |||| ||||| ||||||||||| |||||||| |||||
Sbjct 495 AAGAG-TTAGAGACTCTGGATCTTCTTGAAGCTCTTGGATCAACCAAAAGGATTTTTGAA 553
Query 391 GATTTGAAGCGGCAGCTTCAGCAAG-AAGCCCTGAGATGCACTGA-ACATCTCA------ 442
||||||||| ||||||||||||| | |||| |||||||||| || || ||||
Sbjct 554 GATTTGAAGTGGCAGCTTCAGCA-GCAAGCACTGAGATGCAAGGAGACCCCTCAACATTT 612
Query 443 G--TTCAGATATC-AAAGAGATGAACGATGAGCATTGCCATCACAATCCTATTCCT-ATG 498
| |||| | || ||||||||| ||||||||| ||||||| ||||| ||| | |
Sbjct 613 GCGTTCACAC-TCCAAAGAGATGGTCGATGAGCACTGCCATCGTAATCC----CCTGAAG 667
Query 499 TCATCTCCTGATCTGATCTTGATGGAATTGAAGCAAGCCAAG-ATGAATCTTGGTAAAAC 557
|| || | |||||||| |||||| |||||||||| | ||||||||| |||||||
Sbjct 668 TC-TC-CG-GATCTGATGACCATGGAAATGAAGCAAGCTG-GTATGAATCTTTGTAAAAC 723
Query 558 CATGGATGATCTTGTACTGATCCAATCCTCTGTTGAGTCTCTCAATAAGAAGATGAAGGA 617
|||||||||||||| ||||||| || | || ||| ||||| |||| ||| | ||||||
Sbjct 724 CATGGATGATCTTGCGTTGATCCACTCTTATGCTGAATCTCTGAATATGAAAACGAAGGA 783
Query 618 AGAGAAAGATTTCCTTG-AGAAGA--CACGAGCGAAGCTAACTTATGGGTTTGGAGGACC 674
|||||||||| |||||| || || | | |||| || |||||| ||||| | |
Sbjct 784 AGAGAAAGATGTCCTTGGAGTAGCGTCTCTAGCGGAGG-AACTTAACAGTTTG-A--A-- 837
Query 675 GGTGTCT-CTAGCTGAGGAGCTGAGTCGGATTA-AG-G-TA-AA-ACC-ACAAGTT-CCA 726
| | | | ||| ||| |||| || | || || | | || ||| | || || |||
Sbjct 838 GTT-TAAACCAGC--AGGTCCTGA-TCA-AGTAGAGAGATTCAATACCGAGAATTTACCA 892
Query 727 GATGAA-CCACTAAGG-GAACAGGTTAAGATGGTTGCTGAAACCGATGAAACGGGGTTAA 784
| |||| |||| || | |||||| |||||||||| | ||||||| |||| || | ||
Sbjct 893 G-TGAATCCAC-AATGTGAACAGATTAAGATGGTAGTTGAAACCTATGATACAGCTTTCC 950
Query 785 ACCTGCAGAACAAGAACC-GTCTGAGAACTGCAGAGATGAGATTGGTTGCTGCTAGAAAA 843
| |||| ||| |||| | | |||||||||||| ||||||||||||||||| ||||||
Sbjct 951 ATAAACAGAGCAA-AACCTGCCCGAGAACTGCAGATATGAGATTGGTTGCTGCAAGAAAA 1009
Query 844 ATGGAAGAAGCTGCAAGAGCAGCGGAAGCACTTGCGATTGCTGAAATTACAATGTTATCA 903
|||||||| || |||||||||||||||||||||||| |||||||||| || || |||||
Sbjct 1010 ATGGAAGAGGCAGCAAGAGCAGCGGAAGCACTTGCGCTTGCTGAAATGACCATATTATC- 1068
Query 904 TCCAACGGT-GAAAGCCAAGACGATGATTCGGAATTTTGCTTTCC-AGAGCCTCCAAGAT 961
| | | | |||| |||||||| | | | | |||| || | || | ||| | |
Sbjct 1069 -C-AGCAGAAGAAA-CCAAGACGCTC-T-C----T---GCTTCCCTA-AGACACCATGTT 1115
Query 962 CTCCCGTAACACCGAGAGGACTAAGGATTGAT-AATGACTTCTCCACCGATAATAGCTCA 1020
||| |||||| | || || | | || || || || || |||||| || | ||||
Sbjct 1116 TTCCATTAACACTTAAAGCAC-A-G-AT-GAACAAAGAATTATCCACCAATG-T--CTCA 1168
Query 1021 AGAAGAG-GAATTTTAAAGAAGCTTGAGGAAGCTACCGAAGGAGTTAAACAAAGTAAACA 1079
|||| || || | || | |||||| |||||||||| ||||| ||||||||||||||||||
Sbjct 1169 AGAATAGAGA-TCTTGAGGAAGCTGGAGGAAGCTAACGAAGAAGTTAAACAAAGTAAACA 1227
Query 1080 AGCTTTAGAAGCTGCGTTAAACCGAGTAGAGATTGCTAATGTGAAGCAACTTGCAGCTGA 1139
||| || |||| |||||||||||| ||||| || |||| |||||||||||||| ||| ||
Sbjct 1228 AGCCTTGGAAGTTGCGTTAAACCGGGTAGAAATCGCTAGTGTGAAGCAACTTGAAGCAGA 1287
Query 1140 AAATGC-TTTCCGTGGGTGGA-CAAAAGACTCATCGAAAG 1177
| | || |||| | | |||| || | || |||| |||||
Sbjct 1288 AGAGGCATTTCGGCAG-TGGAACATA-GAGTCATGGAAAG 1325
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82931300340
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5