BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483182
Length=2019
Score E
Sequences producing significant alignments: (Bits) Value
AT2G41140.1 | Symbols: CRK1, ATCRK1, ATCBK3 | CDPK-related kina... 3290 0.0
AT3G56760.1 | Symbols: | Protein kinase superfamily protein | ... 1764 0.0
> AT2G41140.1 | Symbols: CRK1, ATCRK1, ATCBK3 | CDPK-related kinase
1 | chr2:17150387-17153690 FORWARD LENGTH=2148
Length=2148
Score = 3290 bits (1781), Expect = 0.0
Identities = 1942/2021 (96%), Gaps = 6/2021 (0%)
Strand=Plus/Plus
Query 1 AATTCATGGGGATCTGTCATGGTAAACCCATCGAACAGCAACAATCAAAAAGCCTCCCAG 60
|||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||
Sbjct 101 AATTCATGGGGATCTGTCATGGAAAACCCGTCG---AGCAACAATCAAAAAGCCTCCCAG 157
Query 61 TTTCCGGCGAAAC-AGATGAAGCTCCGACGAATTCACAGCCACCGGCGAAATCTTCCGGC 119
||||||||||||| | ||||||||||||||||||||||||||||||||||||| || |||
Sbjct 158 TTTCCGGCGAAACTA-ATGAAGCTCCGACGAATTCACAGCCACCGGCGAAATCCTCTGGC 216
Query 120 TTTCCGTTTTACAGCCCAAGTCCTGTACCTAGCTTATTCAAATCCTCACCTTCCGTATCT 179
||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct 217 TTTCCGTTTTATAGCCCGAGTCCTGTACCTAGCTTATTCAAATCCTCACCATCTGTATCT 276
Query 180 TCGAGCGTGAGCTCAACGCCTCTTCGTATCTTCAAGAGACCTTTCCCTCCTCCTTCTCCT 239
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 277 TCTAGCGTGAGCTCAACGCCTCTTCGTATCTTCAAGAGACCTTTCCCTCCTCCTTCTCCT 336
Query 240 GCTAAGCACATACGAGCTTTCCTCACGCGTCGCTACGGCTCTGTCAAGCCCAATGCGGTT 299
|||||||||||||||||||||||| |||||||||| |||||||||||||| |||| ||||
Sbjct 337 GCTAAGCACATACGAGCTTTCCTCGCGCGTCGCTATGGCTCTGTCAAGCCTAATGAGGTT 396
Query 300 TCGATTCCCGAAGGCAAAGAGTGTGAGATTGGTCTCGATAAGAGTTTTGGGTTTTCGAAA 359
|||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| |||
Sbjct 397 TCGATTCCCGAAGGTAAAGAATGTGAGATCGGTCTCGATAAGAGTTTTGGCTTTTCAAAA 456
Query 360 CAGTTTGCTTCACACTACGAGATTGATGGTGAGGTGGGTCGTGGACATTTTGGGTATACT 419
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 457 CAGTTTGCTTCACACTATGAGATTGATGGTGAGGTGGGTCGTGGACATTTTGGATATACT 516
Query 420 TGCTCTGCTAAGGGTAAAAAAGGTAGCTTGAAAGGTCAAGAAGTTGCTGTTAAAGTTATT 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 TGCTCTGCTAAGGGTAAAAAAGGTAGCTTGAAAGGTCAAGAAGTTGCTGTTAAAGTTATT 576
Query 480 CCTAAATCAAAGATGACAACTGCAATTGCCATTGAGGATGTTAGTAGAGAAGTGAAGATG 539
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 577 CCTAAATCAAAGATGACAACTGCAATTGCGATTGAGGATGTTAGTAGAGAAGTGAAGATG 636
Query 540 TTGCGGGCTTTGACTGGTCATAAGAACCTAGTCCAGTTTTATGACGCGTTTGAAGATGAT 599
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 637 TTGCGGGCTTTGACTGGTCATAAGAACCTAGTCCAGTTCTATGACGCGTTTGAAGATGAT 696
Query 600 GAAAATGTTTATATTGTCATGGAATTATGCAAAGGTGGTGAACTCTTGGACAAAATACTT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 GAAAATGTTTATATTGTCATGGAATTATGCAAAGGTGGTGAACTCTTGGACAAAATACTT 756
Query 660 CAAAGGGGTGGAAAATACTCAGAAGATGATGCTAAAAAAGTTATGGTTCAGATTCTCAGT 719
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 757 CAAAGGGGTGGAAAATACTCCGAAGATGATGCTAAAAAAGTTATGGTTCAGATTCTCAGT 816
Query 720 GTTGTGGCTTACTGTCATCTACAAGGTGTTGTTCACCGTGACCTTAAACCCGAGAACTTT 779
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 817 GTTGTGGCTTACTGTCATCTACAAGGTGTGGTTCACCGTGACCTTAAACCCGAGAACTTT 876
Query 780 CTTTTCTCAACGAAGGATGAGACTTCTCCTCTGAAAGCAATTGATTTTGGTCTTTCTGAT 839
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 877 CTTTTCTCTACCAAGGATGAGACTTCTCCTCTGAAAGCAATTGATTTTGGTCTTTCTGAC 936
Query 840 TATGTCAAGCCAGACGAGAGGTTGAATGATATTGTAGGAAGTGCATACTACGTGGCCCCG 899
|||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct 937 TATGTCAAGCCAGACGAGAGGTTGAATGATATTGTAGGGAGTGCTTACTATGTGGCCCCG 996
Query 900 GAAGTTTTACACCGTACATATGGAACTGAAGCTGACATGTGGAGCATAGGAGTGATTGCT 959
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 997 GAAGTTTTACACCGTACATATGGAACAGAAGCTGACATGTGGAGTATAGGAGTGATTGCT 1056
Query 960 TATATTCTTCTCTGTGGCAGTCGACCCTTCTGGGCCCGTACTGAATCCGGAATTTTTCGA 1019
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1057 TATATTCTTCTCTGTGGCAGTCGACCCTTTTGGGCCCGTACTGAATCCGGAATCTTTCGA 1116
Query 1020 GCTGTCCTAAAGGCAGAACCGAATTTTGAAGAAGCTCCTTGGCCATCCCTATCACCTGAC 1079
||||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct 1117 GCTGTACTAAAGGCAGAACCGAATTTTGAAGAAGCTCCTTGGCCTTCTCTATCACCCGAA 1176
Query 1080 GCTGTAGATTTTGTGAAAAGATTGCTTAACAAAGATTACCGTAAACGACTAACTGCGGCC 1139
||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||
Sbjct 1177 GCTGTAGATTTTGTGAAGAGATTGCTAAACAAAGATTACCGTAAAAGACTAACTGCGGCC 1236
Query 1140 CAGGCTTTGTGTCATCCCTGGCTGGTTGGCTCGCATGAACTAATGATTCCATCTGATATG 1199
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1237 CAGGCTTTGTGTCATCCCTGGCTGGTTGGCTCGCATGAACTAAAGATTCCATCTGATATG 1296
Query 1200 ATCATATACAAGCTTGTAAAAGTGTACATAATGTCAACTTCATTGAGAAAATCAGCTTTA 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1297 ATCATATACAAGCTTGTAAAAGTGTACATAATGTCAACTTCATTGAGAAAATCGGCTTTA 1356
Query 1260 GCGGCTCTTGCCAAGACATTAACTGTACCGCAGTTAGCTTATCTGCAGGAGCAATTCACA 1319
|||||||||||||| ||||||||||||||||||||||| ||||| | |||||||||||||
Sbjct 1357 GCGGCTCTTGCCAAAACATTAACTGTACCGCAGTTAGCGTATCTTCGGGAGCAATTCACA 1416
Query 1320 TTGTTGGGGCCAAGCAAAAATGGATATATCTCTATGCAAAACTACAAAACAGCAATCCTA 1379
|||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct 1417 TTGTTGGGGCCAAGCAAAAATGGATATATCTCGATGCAGAATTACAAAACAGCAATCCTA 1476
Query 1380 AAGAGTTCAACAGATGCTATGAAGGATTCACGAGTGTTAGATTTTGTTCACATGATAAGT 1439
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1477 AAGAGTTCAACAGATGCTATGAAGGATTCTCGAGTGTTTGATTTTGTTCACATGATAAGT 1536
Query 1440 TGTCTTCAATACAAGAAACTAGATTTTGAAGAGTTTTGTGCTTCAGCATTAAGCGTTTAT 1499
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1537 TGTCTTCAATACAAGAAACTAGACTTTGAAGAGTTTTGTGCTTCAGCATTAAGCGTTTAT 1596
Query 1500 CAGCTCGAAGCAATGGAAACATGGGAGCAACATGCACGGCGTGCTTACGAGTTGTTTGAG 1559
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1597 CAGCTCGAAGCAATGGAGACATGGGAGCAACATGCACGGCGTGCTTACGAGTTGTTTGAG 1656
Query 1560 AAAGACGGGAATAGACCCATCATGATTGAAGAACTTGCATCGGAACTCGGACTCGGGCCA 1619
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1657 AAAGACGGGAATAGGCCCATCATGATTGAAGAACTTGCATCGGAACTCGGACTAGGGCCA 1716
Query 1620 TCAGTGCCGGTGCACGTTGTTCTCCAGGATTGGATAAGACATTCTGATGGCAAGCTTAGT 1679
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1717 TCAGTGCCGGTGCACGTTGTTCTTCAGGATTGGATAAGACATTCTGATGGCAAACTTAGT 1776
Query 1680 TTCTTAGGCTTTGTCAGATTACTACATGGCGTGTCTTCCCGGACCTTACAAAAAGCTTAG 1739
|||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1777 TTCTTAGGGTTTGTCAGATTGCTACATGGCGTGTCTTCTCGGACCTTACAAAAAGCTTAG 1836
Query 1740 AGTAACGCCATTGTTAGATGAGAAAAGATGCGACTAGGTGGAGTAGATCTGGtttcttct 1799
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1837 AGTAACGCCATTGTTAGATGAGAAAAGATGCAACTAGGTGGAGTAGATCTGGTTTCTTCT 1896
Query 1800 tttctttccacttcttgatagtttttttagttttctttttctATTCATGGGTAAGCGTCT 1859
|| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1897 TTCCTCTCCACTTCTTGATAGTTTTTTTAGTTTTCTTTTTCTATTCATGGTTAAGCTTCT 1956
Query 1860 GAGTCAAAGATTCGATAATTATGTCTGTGAGTGTATGTGTGTGTGGTGGGAAGGAAAAGT 1919
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1957 GAGTCAAAGATTCGATAATTATGTCTGTGAGTGTATTTGTGTGTGGTGGGAAGGAAAGGT 2016
Query 1920 TTATGAAGAAGAGGAATGTACAGAATGAGACATATCCGATTATTGTTTT-AATCCAGTGA 1978
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 2017 TTATGAAGAAGAGGAATGTACAGAATGAGACATATCCGATTGGTGTTTTTAATCCAGTGA 2076
Query 1979 TGTTTACGTGTGAAGCACTCTTTTAATGACCGCCGGAAAAA 2019
|||||||||||||||||||||||||||| | ||||||||||
Sbjct 2077 TGTTTACGTGTGAAGCACTCTTTTAATGGCAGCCGGAAAAA 2117
> AT3G56760.1 | Symbols: | Protein kinase superfamily protein
| chr3:21020558-21023756 REVERSE LENGTH=1837
Length=1837
Score = 1764 bits (955), Expect = 0.0
Identities = 1496/1756 (85%), Gaps = 42/1756 (2%)
Strand=Plus/Plus
Query 6 ATGGGGATCTGTCATGGTAAACCCATCGAACAGCAACAATC-AAAAAGCCTCCCAGTTTC 64
|||||| | |||||||| ||||| |||| | | |||||||| || || |||||| | ||
Sbjct 1 ATGGGGCTGTGTCATGGGAAACCTATCG-A-A-CAACAATCGAAGAA-TCTCCCAATCTC 56
Query 65 CGGCGAAA-CAGATGAAG-CTCCGACGAATTCACAGC-CA-CCGGCGAAATCTTCCGGCT 120
| |||| | || | || | || | ||||| || | || |||||||||||| ||||
Sbjct 57 CAATGAAATC-GAAG-AGACACCTAAGAATT--CATCTCAGAAGGCGAAATCTTCAGGCT 112
Query 121 TTCCGTTTTACAGCCCAAGTCCTGTACCTAGCT-TATTCAAATCCTCACCT--TCCGT-A 176
|||||||||| || ||||| ||| ||||||| | | |||||| |||||||| | || |
Sbjct 113 TTCCGTTTTATAGTCCAAGCCCTTTACCTAG-TCTCTTCAAAACCTCACCTGCTGTGTCA 171
Query 177 TCTTCGAGCGTGAGCTCAACGCCTCTTCGTATCTTCAAGAGACCTTTCCCTCCTCCTTCT 236
|| || ||||||||||| ||||| ||||||||||| ||| |||||||||| ||||| ||
Sbjct 172 TCCTCCAGCGTGAGCTCCACGCCACTTCGTATCTTTAAGCGACCTTTCCCACCTCCATCA 231
Query 237 CCTGCTAAGCACATACGAGCTTTCCTCACGCGTCGCT-ACGGCTCTGTCAAGCCCAATGC 295
|| |||||||| ||||||||| ||||| ||||||| | |||| ||||| ||||||||||
Sbjct 232 CCAGCTAAGCATATACGAGCTCTCCTCGCGCGTCG-TCACGGTTCTGTTAAGCCCAATGA 290
Query 296 GGTTTCGATTCCC-GAAGGCAAAGAGTGTGAGATTGGTC-TCGATAAGAGTTTTGGGTTT 353
| ||||| |||| ||||| | || |||||| |||| | | || |||| ||| |||||
Sbjct 291 AGCTTCGA-TCCCTGAAGGTAGTGAATGTGAGGTTGG-CTTGGACAAGAAATTT-GGTTT 347
Query 354 -TCGAAACAGTTTGCTTCACACTACGAGATTGATGGTGAGGTGGGTCGTGGACATTTTGG 412
|| || |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct 348 CTCTAAGCAGTTTGCTTCACACTACGAGATTGACGGTGAGGTGGGTCGAGGGCATTTTGG 407
Query 413 GTATACTTGCTCTGCTAAGGGTAAAAAAGGTAGCTTGAAAGGTCAAGAAGTTGCTGTTAA 472
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||
Sbjct 408 TTATACTTGCTCTGCTAAGGGGAAAAAAGGTAGCTTGAAAGGTCAAGATGTGGCTGTCAA 467
Query 473 AGTTATTCCTAAATCAAAGATGACAACTGCAATTGCCATTGAGGATGTTAGTAGAGAAGT 532
||||||||| ||||| |||||||| || |||||||| |||||||||||||| ||||||||
Sbjct 468 AGTTATTCCCAAATCCAAGATGACTACGGCAATTGCAATTGAGGATGTTAGAAGAGAAGT 527
Query 533 GAAGATGTTGCGGGCTTTGACTGGTCATAAGAACCTAGTCCAGTTTTATGACGCGTTTGA 592
|||||| ||||||||||| |||||||| ||||||||||||||||| |||||||| || ||
Sbjct 528 GAAGATATTGCGGGCTTTAACTGGTCACAAGAACCTAGTCCAGTTCTATGACGCCTTCGA 587
Query 593 AGATGATGAAAATGTTTATATTGTCATGGAATTATGCAAAGGTGGTGAACTCTTGGACAA 652
|||||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||
Sbjct 588 AGATGATGAAAATGTTTACATTGTCATGGAGTTATGCCAAGGCGGTGAACTCTTGGACAA 647
Query 653 AATACTTCAAAGGGGTGGAAAATACTCAGAAG-ATGATGCTAAAAAAGTTATGGTTCAGA 711
||||||||||||||| || ||||||||||||| | |||||||||||||| ||| ||||||
Sbjct 648 AATACTTCAAAGGGGAGGCAAATACTCAGAAGTA-GATGCTAAAAAAGTAATGATTCAGA 706
Query 712 TTCTCAGTGTTGTGGCTTACTGTCATCTACAAGGTGTTGTTCACCGTGACCTTAAACCCG 771
|||| ||||| || || ||||||||||| ||||| || |||||||||||||| ||||| |
Sbjct 707 TTCTTAGTGTAGTAGCCTACTGTCATCTTCAAGGCGTGGTTCACCGTGACCTCAAACCTG 766
Query 772 AGAACTTTCTTTTCTCAACGAAGGATGAGACTTCTCCTCTGAAAGCAATTGATTTTGGTC 831
|||| ||||| ||| | || ||||||||| |||| ||| ||||||| |||||||||||||
Sbjct 767 AGAATTTTCTCTTCACCACAAAGGATGAGTCTTCCCCTTTGAAAGCCATTGATTTTGGTC 826
Query 832 TTTCTGATTATGTCAAGCCAGACGAGAGGTTGAATGATATTGTAGGAAGTGCATACTACG 891
| || || ||||||| |||||| |||||||||||||| |||||||||||||| || ||||
Sbjct 827 TCTCCGACTATGTCAGGCCAGATGAGAGGTTGAATGACATTGTAGGAAGTGCTTATTACG 886
Query 892 TGGCCCCGGAAGTTTTACACCGTACATATGGAACTGAAGCTGACATGTGGAGCATAGGAG 951
||||||| ||||||||||||||||||||||||||||| || || |||||||| || ||||
Sbjct 887 TGGCCCCTGAAGTTTTACACCGTACATATGGAACTGAGGCAGATATGTGGAGTATTGGAG 946
Query 952 TGATTGCTTATATTCTTCTCTGTGGCAGTCGACCCTTCTGGGCCCGTACTGAATCCGGAA 1011
||||||||||||| || |||||||| || || ||||| ||||||||| ||||||| ||||
Sbjct 947 TGATTGCTTATATACTACTCTGTGGTAGCCGGCCCTTTTGGGCCCGTTCTGAATCTGGAA 1006
Query 1012 TTTTTCGAGCTGTCCT-AAAGGCAGAACCGAATTTTGAAGAAGCTCCTTGGCCATCCCTA 1070
| ||| ||||||| || |||| ||||||| ||||| |||||||||||||||||||| ||
Sbjct 1007 TCTTTAGAGCTGTTCTTAAAG-CAGAACCCAATTTCGAAGAAGCTCCTTGGCCATCTCTT 1065
Query 1071 TCACCTGACGCTGTAGATTTTGTGAAAAGATTGCTTAAC-AAAGATTACCGTAA-ACGAC 1128
||||||||||||||||||||||||||| | ||| |||| |||||||||||||| | |||
Sbjct 1066 TCACCTGACGCTGTAGATTTTGTGAAACGTTTG-TTAAATAAAGATTACCGTAAGA-GAC 1123
Query 1129 TAACTGCGGCCCAGGCTTTGTGTCATCCCTGGCTGGTTGGCTCGCATGAACTAATGATTC 1188
||||||| || |||||||| || ||||| |||||||||||||| |||||| ||| ||| |
Sbjct 1124 TAACTGCTGCACAGGCTTTATGCCATCCGTGGCTGGTTGGCTCACATGAATTAAAGATAC 1183
Query 1189 CATCTGATATGATCATATACAAGCTTGTAAAAGTGTACATAATGTCAACTTCATTGAGAA 1248
|||||||||||||||| |||||||| |||||||| ||||||||||| |||| |||||||
Sbjct 1184 CATCTGATATGATCATTTACAAGCTCGTAAAAGTATACATAATGTCGTCTTCTTTGAGAA 1243
Query 1249 AATCAGCTTTAGCGGCTCTTGCCAAGACATTAACTGTACCGCAGTT-AGCTTATCTGCAG 1307
|||| |||||||||||||||||||| || ||||| ||||||||| | | ||||| ||||
Sbjct 1244 AATCGGCTTTAGCGGCTCTTGCCAAAACTTTAACAGTACCGCAGCTGA-CTTATTTGCAA 1302
Query 1308 GAGCAATTCACAT-TGTTGGGGCCAAGCAAAAATGGATATATCTCTATGCAAAACTACAA 1366
||||| || | || |||| || ||||||||||| ||||||||||| ||||| || || ||
Sbjct 1303 GAGCAGTTTA-ATCTGTTAGGACCAAGCAAAAACGGATATATCTCGATGCAGAATTATAA 1361
Query 1367 AACAGCAATCCTAAAGAGTTCAACAGATGCTATGAAGGATTCACGAGTGTTAGATTTTGT 1426
|||||||||| | ||||| || ||||| |||| |||||||||||||| || ||||||||
Sbjct 1362 AACAGCAATCTTGAAGAGCTCCACAGAAGCTACAAAGGATTCACGAGTCTTGGATTTTGT 1421
Query 1427 TCACATGATAAGTTGTCTTCAATACAAGAAACTAGATTTTGAAGAGTTTTGTGCTTCAGC 1486
|||||||| ||||||||||| || ||||||||||| |||||||||||||| ||||||||
Sbjct 1422 ACACATGATTAGTTGTCTTCAGTATAAGAAACTAGACTTTGAAGAGTTTTGCGCTTCAGC 1481
Query 1487 ATTAAGCGTTTATCAGCTCGAAGCAATGGAAACATGGGAGCAACATGCACGGCGTGCTTA 1546
||||| || |||||||| ||||||||||| || ||||||||||||||||| ||||| ||
Sbjct 1482 TTTAAGTGTATATCAGCTAGAAGCAATGGAGACTTGGGAGCAACATGCACGCCGTGCATA 1541
Query 1547 CGAGTTGTTTGAGAAAGACGGGAATAGACCCATCATGATTGAAGAACTTGC-ATCGGAAC 1605
||||||| |||||| || ||||| ||| ||||||||| ||||||||||| | ||||||
Sbjct 1542 TGAGTTGTATGAGAAGGATGGGAACAGAGTCATCATGATCGAAGAACTTGCCA-CGGAAC 1600
Query 1606 TCGGACTCGGGCCATCAGTGCCGGTGCACGTTGTTCTCCAGGATTGGATAAGACATTCTG 1665
||||||| || ||||| ||||| || || |||||||| || |||||||||||||||||||
Sbjct 1601 TCGGACTAGGTCCATCGGTGCCTGTTCATGTTGTTCTTCAAGATTGGATAAGACATTCTG 1660
Query 1666 ATGGCAAGCTTAGTTTCTTAGGCTTTGTCAGATTACT-ACATGGCGTGTCTTCCCGGACC 1724
|||| ||||| |||||||| || ||||||||| | || ||| ||||| || || || ||
Sbjct 1661 ATGGGAAGCTAAGTTTCTTGGGTTTTGTCAGACT-CTTACACGGCGTCTCCTCTCGTACA 1719
Query 1725 TTACAAAAAGCTTAGA 1740
|| || ||||| ||||
Sbjct 1720 TTGCAGAAAGCGTAGA 1735
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100049686185
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5