BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483213 Length=458 Score E Sequences producing significant alignments: (Bits) Value AT2G41415.1 | Symbols: | Maternally expressed gene (MEG) famil... 409 1e-113 > AT2G41415.1 | Symbols: | Maternally expressed gene (MEG) family protein | chr2:17264402-17265082 REVERSE LENGTH=579 Length=579 Score = 409 bits (221), Expect = 1e-113 Identities = 251/265 (95%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 1 CATTCAAACCATGAAATCATCACATGCATCTCTCATCTGCATACTGTTGCTCTCTCTATT 60 ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| Sbjct 49 CATTCAAACCATGAAATCATCCCATGCATATCTCGTCTGCATACTGTTGCTCTCTCTATT 108 Query 61 TGCTCTACATCAATGTGTGAGGTTACAAAGATCGAACAAAATCGATATGTCTGTATGCGT 120 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 109 TTCTCTACATCAATGTGTGAGGTTAGAAAGATCGAACAAAATCGATATGTCTGTATGCGT 168 Query 121 CCATGACATTTGCGGCGGTGTTTTCGACGGAGGCTGTTATTGCTGTCCCAAAACGCCAGC 180 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 169 CCATGAAATTTGCGGTGGTGTTTTCGACGGAGGCTGTTATTGCTGTCCCAAAACGCCAGC 228 Query 181 TCTTTGCTGGGCAGACA-ACCAATTCTGCACCACCTATTGTCACGCTCAAAGTTAAAACC 239 ||||||||||||||||| || |||||||||||||||||||||| |||||| |||||||| Sbjct 229 TCTTTGCTGGGCAGACATAC-AATTCTGCACCACCTATTGTCAATCTCAAACTTAAAACC 287 Query 240 TTTTAAATAAACTGATCTGGAGCTA 264 || ||||||||||||||||||||| Sbjct 288 TT--AAATAAACTGATCTGGAGCTA 310 Score = 191 bits (103), Expect = 6e-48 Identities = 136/151 (90%), Gaps = 5/151 (3%) Strand=Plus/Plus Query 312 TCTTGAGGTTTAAAGATCTTGTGAAAGGATGTTGAGGTGTAGTCATTA---ATTATGTGT 368 |||||||||||||||||||| |||||| ||||||||||| | || || ||||||| | Sbjct 418 TCTTGAGGTTTAAAGATCTTTTGAAAGCATGTTGAGGTGGAATC-GTAGCCATTATGTAT 476 Query 369 TTCCTTAGTTTACAAGTAATATACCATAATATTTGTTGTGATG-TTTTCTATTTTATAAT 427 ||||||||||||||||||||||||||||||||||||| ||||| |||||| || || ||| Sbjct 477 TTCCTTAGTTTACAAGTAATATACCATAATATTTGTTTTGATGTTTTTCTGTTGTAGAAT 536 Query 428 CGGGGAATCTCATAAATTCAGACTTATTGAG 458 ||||||||||||||||||||||||||||||| Sbjct 537 CGGGGAATCTCATAAATTCAGACTTATTGAG 567 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21816203066 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5