BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483250 Length=1639 Score E Sequences producing significant alignments: (Bits) Value AT2G41705.1 | Symbols: | camphor resistance CrcB family protei... 2418 0.0 > AT2G41705.1 | Symbols: | camphor resistance CrcB family protein | chr2:17397274-17400081 FORWARD LENGTH=1837 Length=1837 Score = 2418 bits (1309), Expect = 0.0 Identities = 1497/1586 (94%), Gaps = 20/1586 (1%) Strand=Plus/Plus Query 1 TTAGCTCGATTTCTCCGCCGGCGACTTTT-GGATCAAATTTGATTCTTCACGATTAAGAT 59 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 163 TTAGCTCGATTTCTCCGCCGGCGACTTTTGGGATCAAATTTGATTCTTCACGATTAAGAT 222 Query 60 TGAATTCGCCATTAGGTAAAGC-TCCTTTAAGAAATAC-TGTGTTTTGGCAACAAAGCCT 117 ||||||||||||||||| ||| || |||||| ||| | | || |||||| |||| |||| Sbjct 223 TGAATTCGCCATTAGGTGGAGCATCATTTAAG-AAT-CTTATGCTTTGGCTACAACGCCT 280 Query 118 ATGGATTCCGGTCAAAGCCGCGTAGAACAACCCTACCGAA-CCAAGTCTTTTAGTCGGGA 176 |||||| | ||||||||| || ||| |||| || | || ||||||||||||||||||| Sbjct 281 ATGGATACGGGTCAAAGCAGCATAG---AACCTTATC-AAGCCAAGTCTTTTAGTCGGGA 336 Query 177 GAGCAGTGTAGCCTCTTCTTTAAGCTTATCACGTAGTTTGCCTCACCTAATTGACAATGA 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 337 GAGCAGTGTAGCCTCTTCTTTAAGCTTATCACGTAGTTTGCCTCACCTAATTGACAATGA 396 Query 237 CGTCGATAGTGAGAGTGTCTCAGAGGCTGGGGATATTGGTGATCGCTCACTTCGGAGAAG 296 ||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 397 CGTCGATAGTGAGAGTGTCTCAGAGGCAGGGGATATTGGGGACCGCTCACTTCGGAGAAG 456 Query 297 GCATAGTGCTGGTCGAAGCAGCCGTTTGTCTGCCGATGATTTGATGGAACAAGGGACTCA 356 ||||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||| Sbjct 457 GCATAGTGCTGGTAGAAGCAGCCGTTTGTCTGCTGATGATTTTATAGAACAAGGGACTCA 516 Query 357 TGATACTTCTCGTCAAGAACAAGATGTATTACATGATCTTCGAGCTTTCAACACAGCTTC 416 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| Sbjct 517 TGATACTTCTCGTCAAGAACAAGATATATTACATGACCTTCGAGCTTTCAACACTGCTTC 576 Query 417 TGTTAATAAACCTTTGCCTGAGGATATAACAGCATCTCCTTTACCGACCAAGTCACTCTT 476 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 577 CGTAAATAAAACTTTGCCTGAGGACATAACAGCATCTCCTTTACCGACCAAGTCACTCTT 636 Query 477 GTCACCTGAGATAAACAAC-CCGGAAAAGGAGGAAGAGCGCGTGTTACCAAAGTCCTTGG 535 ||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||| Sbjct 637 GTCACCTGAAATAAACAACTCCGGAAA-GGAGGAAGAGCGAGTGTTACCAAAGTCCTTGG 695 Query 536 ATTACATATCATGTCTAATTCATTTGGCTGTTTTTGGGATTTTTGGGGCCATTACGAGAT 595 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 696 AGTACATATCATGCCTAATTCATTTGGCTGTTTTTGGGATTTTTGGGGCCATTACGAGAT 755 Query 596 ATTTGCTGCAGAAATTGTTTGGACCAACTGGTGCTCGAGTAACAAGTGATGGAAGCATCT 655 |||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 756 ATTTGCTGCAAAAATTGTTTGGGCCAACTGGTGCTCGAGTAACAAGTGATGGGAGCATCT 815 Query 656 TGTACCTTGATCTTCCCTCCAACATGGTAGGATCATTCTTGATGGGTTGGTTTGGTGTCG 715 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 816 TGTACCTTGATCTTCCCTCCAACATGGTAGGATCATTCTTGATGGGTTGGTTTGGCGTTG 875 Query 716 TATTCAAAGCAGATATAGCAAGAGTTTCTGAATTTGTGGCGATAGGATTATCGACTGGTT 775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 876 TATTCAAAGCAGATATAGCAAGAGTTTCTGAATTTGTGGCGATAGGATTATCGACTGGTT 935 Query 776 ATTTGGGGAGCCTGACAACATTCAGCGGTTGGAACCAGAAAATGCTGGATCTTAGTGCTG 835 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 936 ATTTGGGGAGTCTGACAACATTCAGCGGTTGGAACCAGAAAATGCTGGATCTTAGTGCTG 995 Query 836 ATGGTCAATGGGTATATGCCCTGCTTGGCTTTCTT-TTAGGATTGTTTCTCACGTCATAC 894 ||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||| Sbjct 996 ATGGTCAATGGGTGTATGCTGTGCTTGGCTTT-TTATTAGGATTGTTTCTCACGTCATAC 1054 Query 895 TCCATAATTCTGGGAGTGGAAACGGCCAAAGGGTTTAAATGGCTTCTTCATAGAAGAGCT 954 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1055 TCCATAATTCTGGGAGTGGAAACGGCCAAAGGGTTTAAATGGCTTCTTCATAGAAGAGCT 1114 Query 955 TCTTCTGAGGAAAAACACTC-TTGTCTTAAGGTTAACACCTTCCAGAGCCATATTGTGTC 1013 ||||||||||| ||| | | ||||||||||||||||||||||||||||||||||||||| Sbjct 1115 TCTTCTGAGGATAAATTC-CATTGTCTTAAGGTTAACACCTTCCAGAGCCATATTGTGTC 1173 Query 1014 TATGACCCTGATGCTTCTGTTGCTTGTGGCTTTACTCACTGCGAGTTCCATTCTGCTTGT 1073 | |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1174 TCTGACCCTGATGCTTCTGTTGCTTGTGGCTTTACTCACTGCCAGTTCCATACTGCTTGT 1233 Query 1074 GAAAGAGTTTGACAAAGGAACAAGCGAGGCTCAACTATGGTTAGGTTGCTTAGTTGCAGC 1133 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1234 GAAAGAGTTTGACAAAGGAACAAGCGAGGCTCAGCTATGGTTTGGTTGCTTAGTTGCAGC 1293 Query 1134 CCCTGGTGTCTGGCTCAGATGGTTCTTAGCCCGACTCAATGGACGTGGACTGGGAAAAGA 1193 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1294 CCCTGGTGTCTGGCTCAGATGGTTCTTAGCCCGACTCAATGGACGTGGGCTGGGAAAGGA 1353 Query 1194 TAGACAAAACTTGAGGTGGGTCCCATTTGGCACCCTCATTGCAAATGTAGCTGCAGCTTG 1253 ||| ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1354 TAGTCAAAATTTGAGATGGGTCCCATTTGGCACCCTCATTGCAAATGTAGTTGCAGCTTG 1413 Query 1254 CGTTATGGCAGCATTGGCCAC-TGTAAAGAAATCGGTGAACACGAGAACATGTAACACGG 1312 |||||||||||||||||| || | | |||||||||||||||||||||||||||||||||| Sbjct 1414 CGTTATGGCAGCATTGGCTACCT-TGAAGAAATCGGTGAACACGAGAACATGTAACACGG 1472 Query 1313 TTGCTTCGAGCATACAGTTTGGTCTGTTGGGATGTCTGAGCACAGTTTCCACCTTCATGG 1372 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1473 TTGCTTCGAGCATACAGTTTGGTCTGTTGGGATGTCTGAGCACAGTTTCGACCTTCATGG 1532 Query 1373 CTGAGTTCAATGCGATGAGAGAAAGTGATTACCCATGGAGAGCCTATGCGTATGCATCTT 1432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1533 CTGAGTTCAATGCGATGAGAGAAAGTGATTACCCATGGAGAGCCTATGCGTATGCATCTT 1592 Query 1433 TCACCATTGCAGTTTCTTTTGCGATTGGAACTGTTATATACTCAGTCCCTGTCTGGGTAG 1492 | ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1593 TTACCATTGTGGTTTCTTTTGCGATTGGAACTATTATATACTCAGTCCCTGTCTGGGTAA 1652 Query 1493 TAGGGTTCAGTTAGTTGTATCAAAACTAGATAAGTCTTGTGTAGATGATGTAA-AGATAC 1551 |||| ||||||||||||||||||| |||||||||||||||| ||||||||| | | |||| Sbjct 1653 TAGGATTCAGTTAGTTGTATCAAAGCTAGATAAGTCTTGTGCAGATGATGTGATA-ATAC 1711 Query 1552 ATATTTGTAACATTTGGTAAAGATGA 1577 ||| | ||||||||||||| |||||| Sbjct 1712 ATAGTCGTAACATTTGGTAGAGATGA 1737 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80973479085 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5