BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483269
Length=1596
Score E
Sequences producing significant alignments: (Bits) Value
AT2G41860.1 | Symbols: CPK14 | calcium-dependent protein kinase... 2551 0.0
AT3G57530.1 | Symbols: CPK32, ATCPK32, CDPK32 | calcium-depende... 1279 0.0
> AT2G41860.1 | Symbols: CPK14 | calcium-dependent protein kinase
14 | chr2:17467344-17469786 REVERSE LENGTH=1895
Length=1895
Score = 2551 bits (1381), Expect = 0.0
Identities = 1525/1596 (96%), Gaps = 3/1596 (0%)
Strand=Plus/Plus
Query 1 ATGGGGAATTGTTGTGGAACGGCTGGATCGTTGATTCAAAACGATAAACAGAAGAAAGGT 60
||||| ||||||||||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct 1 ATGGGAAATTGTTGTGGAACGGCTGGATCGTTGATTC--AA-GATAAGCAGAAGAAAGGT 57
Query 61 TTTAAATTGCCAAATCCTTTTTCAAACGATTACGGTAACCACCACGATGGCCTGAAGCTT 120
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct 58 TTTAAATTGCCAAATCCTTTCTCAAACGAGTACGGCAACCACCACGATGGCCTTAAGCTT 117
Query 121 ATCGTGTTGAAGGAACCAACGGGTCACGAGATCAAGCAGAAATACAAATTAGGTCGTGAG 180
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 118 ATCGTGTTGAAGGAACCAACGGGTCATGAGATCAAGCAGAAATATAAATTAGGTCGTGAG 177
Query 181 CTAGGTCGAGGAGAGTTTGGGGTCACGTATCTATGCACCGAGATTGAGACCGGAGAGATT 240
|||||||||||||||| || || |||||||| ||||||||||| |||||||||||||||
Sbjct 178 TTAGGTCGAGGAGAGTTCGGTGTGACGTATCTGTGCACCGAGATCGAGACCGGAGAGATT 237
Query 241 TTCGCATGCAAATCGATTTTAAAGAAGAAGCTGAAAACGTCGATTGATATTGAGGACGTT 300
|||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct 238 TTCGCATGCAAATCAATCTTAAAGAAGAAGCTGAAAACGTCGATTGATATAGAGGACGTT 297
Query 301 AAGAGAGAAGTTGAGATCATGAGGCAAATGCCTGAGCATCCTAATATTGTTACTTTGAAA 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 298 AAGAGAGAAGTTGAGATCATGAGGCAAATGCCTGAACATCCTAATATTGTTACTTTGAAA 357
Query 361 GAGACTTATGAGGATGATAAAGCTGTTCATTTGGTTATGGAGCTTTGTGAAGGCGGTGAG 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 358 GAGACTTATGAGGATGATAAAGCTGTGCATTTGGTTATGGAGCTTTGTGAAGGCGGTGAG 417
Query 421 CTTTTCGATAGGATTGTTGCTAGAGGGCATTATACGGAGAGAGCTGCTGCTTCGGTTATT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 CTTTTCGATAGGATTGTTGCTAGAGGGCATTATACGGAGAGAGCTGCTGCTTCGGTTATT 477
Query 481 AAGACGATCATCGAGGTTGTTCAGATGTGCCATAAGCATGGAGTCATGCACAGAGACTTA 540
|| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct 478 AAAACGATCATCGAGGTTGTTCAGATGTGTCATAAGCATGGAGTAATGCACAGAGATTTA 537
Query 541 AAACCTGAGAACTTCTTGTTTGCAAACAAGAAGGAAACTGCATCTTTGAAGGCTATTGAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 AAACCTGAGAACTTCTTGTTTGCAAACAAGAAGGAAACTGCATCTTTGAAGGCTATTGAT 597
Query 601 TTTGGTCTCTCTATTTTCTTTAAACCAGGCGAGAGATTTAACGAAATCGTTGGGAGTCCT 660
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 598 TTTGGTCTCTCTGTTTTCTTTAAACCAGGCGAGAGATTTAACGAAATTGTTGGGAGTCCT 657
Query 661 TATTACATGGCTCCCGAGGTATTAAGGCGGAGTTATGGACAAGAAATCGACATTTGGAGC 720
|| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 658 TACTACATGGCTCCTGAGGTATTAAGGAGGAGTTATGGACAAGAAATTGACATTTGGAGC 717
Query 721 GCAGGAGTGATTCTTTACATTTTGCTCTGTGGTGTTCCACCTTTTTGGGCAGAAACCGAA 780
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 718 GCAGGAGTGATTCTTTACATATTGCTCTGTGGTGTTCCACCTTTTTGGGCAGAAACCGAA 777
Query 781 CATGGAGTCGCGAAAGCAATTCTTCGATCTGTGATCGACTTCAGAAGAGACCCCTGGCCG 840
||||||||||| |||||||||||| |||||| || ||||| | |||||||||||||||
Sbjct 778 CATGGAGTCGCAAAAGCAATTCTTAAATCTGTAATTGACTTTAAAAGAGACCCCTGGCCT 837
Query 841 AAAGTTTCTGGTAATGCAAAAGATCTGATAAAAAAGATGCTTCATCCAGATCCAAGGCGT 900
|||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 838 AAAGTTTCTGATAATGCAAAAGATCTGATCAAAAAGATGCTTCATCCTGATCCAAGGCGT 897
Query 901 CGTCTAACAGCTCAACAAGTGCTTGATCATCCGTGGATACAGAATGGTAAGAATGCTTCC 960
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 CGTCTAACTGCTCAACAAGTGCTTGATCATCCGTGGATACAGAATGGTAAGAATGCTTCC 957
Query 961 AATGTATCATTGGGTGAAACCGTAAGAGCAAGGCTTAAGCAATTCTCTGTTATGAACAAG 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 AATGTATCATTGGGTGAAACCGTAAGAGCAAGGCTTAAGCAATTCTCTGTTATGAACAAG 1017
Query 1021 CTCAAGAAAAGGGCACTCAGGGTTATTGCTGAGCATCTATCGGTTGAAGAAACATCTTGC 1080
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1018 CTCAAGAAAAGGGCACTCAGGGTTATCGCTGAGCATCTATCGGTTGAAGAAACATCTTGC 1077
Query 1081 ATAAAAGAAAGATTCCAAGTAATGGACACAAGCAATAGAGGGAAGATTACCATCAACGAG 1140
|||||||||||||||||||||||||| |||||||||||||| |||||||| |||| ||||
Sbjct 1078 ATAAAAGAAAGATTCCAAGTAATGGATACAAGCAATAGAGGAAAGATTACTATCACCGAG 1137
Query 1141 CTAGGAATCGGATTGCAGAAACTCGGGATTGTTGTTCCTCAAGATGACATTCAAATATTG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 CTAGGAATCGGATTGCAGAAACTCGGGATTGTTGTTCCTCAAGATGACATTCAAATATTG 1197
Query 1201 ATGGACGCGGGAGATGTTGATAAAGATGGATACTTAGACGTCAATGAATTTGTAGCCATA 1260
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1198 ATGGACGCGGGAGATGTTGATAAAGATGGATATTTAGACGTCAATGAATTTGTAGCCATA 1257
Query 1261 TCGGTACACATCAGGAAGTTAGGCAACGACGAGCACTTAAAGGAAGCCTTTACGTTCTTC 1320
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 1258 TCGGTACACATCAGGAAGTTAGGCAACGACGAGCACTTAAAGAAAGCTTTTACGTTCTTT 1317
Query 1321 GACAAAAACAAGAGTGGTTATATAGAAATACAAGAATTAAGAGATGCTTTGGCAGATGAT 1380
||||||||||||||||||||||| |||||| | || ||||||||||||||||||||||||
Sbjct 1318 GACAAAAACAAGAGTGGTTATATCGAAATAGAGGAGTTAAGAGATGCTTTGGCAGATGAT 1377
Query 1381 ATTGACACTACTAGTGAAGAAGTTGTCGAAGCCATTATCCTTGATGTCGACACCAATAAG 1440
||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct 1378 GTTGACACTACTAGTGAAGAAGTTGTTGAAGCCATTATTCTTGATGTCGATACCAATAAG 1437
Query 1441 GATGGGAAAATAAGTTATGAAGAGTTTACAACGATGATGAAAACGGGAACGGATTGGAGA 1500
||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||
Sbjct 1438 GATGGGAAAATAAGTTACGACGAATTTGCAACGATGATGAAAACGGGAACGGATTGGAGA 1497
Query 1501 AAAGCTTCGAGGCAGTACTCGAGGGACCGGTTTAAGAGTCTTAGCCTTAAGCTGATGCAA 1560
|||||||||||||||||||||||||||| ||||||| ||||||| |||||||| ||||||
Sbjct 1498 AAAGCTTCGAGGCAGTACTCGAGGGACCTGTTTAAGTGTCTTAGTCTTAAGCTCATGCAA 1557
Query 1561 GATGGGTCCTTGCAGTCTAATGGAGATACAAAATAG 1596
|||||||||||||||||||||||||||||||| |||
Sbjct 1558 GATGGGTCCTTGCAGTCTAATGGAGATACAAAGTAG 1593
> AT3G57530.1 | Symbols: CPK32, ATCPK32, CDPK32 | calcium-dependent
protein kinase 32 | chr3:21296554-21299591 REVERSE LENGTH=2201
Length=2201
Score = 1279 bits (692), Expect = 0.0
Identities = 1239/1500 (83%), Gaps = 49/1500 (3%)
Strand=Plus/Plus
Query 115 AAGCTTATCGTGTTGAAGGAACCAACGGGTCACGAGATCAAG-CAGAAATACAAATTAGG 173
||||||||||| ||||| || ||||| |||| |||||| || | ||||||| || ||
Sbjct 379 AAGCTTATCGTTTTGAATGATCCAACAGGTCGTGAGATCGAGTC-TAAATACACGTTGGG 437
Query 174 TCGTGAGCTAGGTCGAGGAGAGTTTGGGGTCACGTATCTATGCACCGAGATTGAGACCGG 233
| ||||||||||| ||||| || || || ||||||||||| || || | |||| | |
Sbjct 438 GAGAGAGCTAGGTCGTGGAGAATTCGGTGTTACGTATCTATGTACTGATAAGGAGA-CAG 496
Query 234 A-GA-GATTTTCGCATGCAAATCGATTTTAAAGAAGAAGCTGAAAAC-GTC-GATTGATA 289
| || | |||| || || ||||||||||| ||||||||||||| || | | | ||||||
Sbjct 497 ACGACG-TTTTTGCTTGTAAATCGATTTTGAAGAAGAAGCTGAGGACAG-CTG-TTGATA 553
Query 290 TTGAGGACGTTAAGAGAGAAGTTGAGATCATGAGGCAAATGCCTGAGCATCCTAATATTG 349
|||| || |||| |||||| |||||||| |||||||| |||||||||||||||||| |||
Sbjct 554 TTGAAGATGTTAGGAGAGAGGTTGAGATTATGAGGCATATGCCTGAGCATCCTAATGTTG 613
Query 350 TTACTTTGAAAGAGACTTATGAGGATGATAAAGCTGTTCATTTGGTTATGGAGCTTTGTG 409
|||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 614 TTACTTTGAAGGAGACTTATGAGGATGAGCATGCTGTTCATTTGGTTATGGAGCTTTGTG 673
Query 410 AAGGCGGTGAGCT-TTTCGATAGGATTGTTGCTAGAGGGCATTATACGGAGAGAGCTGCT 468
|||| ||||| | ||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 674 AAGGTGGTGAATTGTTT-GATAGGATTGTTGCTAGAGGGCATTATACTGAGAGAGCTGCT 732
Query 469 GCTTCGGTTATTAAGACGATCATCGAGGTTGTTCAGATGTGCCATAAGCATGGAGTCATG 528
||| | || | |||||| ||||| || ||||||||| |||| ||||||||||| || |||
Sbjct 733 GCTGCTGTCACTAAGACCATCATGGAAGTTGTTCAGGTGTGTCATAAGCATGGGGTAATG 792
Query 529 CACAGAGACTTAAAACCTGAGAACTTCTTGTTTGCAAACAAGAAGGAAACTGCATCT-TT 587
||||| ||| | |||||||||||||||||||||| |||||||||||| |||||| || ||
Sbjct 793 CACAGGGACCTGAAACCTGAGAACTTCTTGTTTGGAAACAAGAAGGAGACTGCACCTCTT 852
Query 588 GAAGGCTATTGATTTTGGTCTCTCTATTTTCTTTAAACCAGGCGAGAGATTTAACGAAAT 647
||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 853 -AAGGCGATTGATTTTGGTCTCTCTGTTTTCTTTAAACCAGGCGAGAGGTTTAACGAAAT 911
Query 648 CGTTGGGAGTCCTTATTACATGGCTCCCGAGGTATTAAGGCGGAGTTATGGACAAGAAAT 707
|||||| ||||| || ||||||||||||||||| ||| |||| |||||| | |||| |
Sbjct 912 CGTTGGTAGTCCGTACTACATGGCTCCCGAGGTGCTAAAACGGAATTATGGTCCAGAAGT 971
Query 708 CGACATTTGGAGCGCAGGAGTGATTCTTTACATTTTGCTCTGTGGTGTTCCACCTTTTTG 767
|| |||||||| ||||| || ||||||||||| |||| |||||||| || ||||| ||
Sbjct 972 TGATATTTGGAGTGCAGGTGTAATTCTTTACATACTGCTATGTGGTGTCCCGCCTTTCTG 1031
Query 768 GGCAGAAACCGAACATGGAGTCGCGA-AAGCAATTCTTCGATCTGTGA-TCGACTTCAGA 825
||||||||| ||||| ||||| || | |||||||| |||||||||| | | |||||||||
Sbjct 1032 GGCAGAAACTGAACAAGGAGTTGC-ACAAGCAATTATTCGATCTGT-ACTAGACTTCAGA 1089
Query 826 AGAGACCCCTGGCCGAAAGTTTCTGGTAATGCAAAAGATCTGATAAA-AAAGATGCTTCA 884
|| ||||| ||||| || ||||||| || |||||||| || || | ||| |||||| |
Sbjct 1090 AGGGACCCATGGCCCAAGGTTTCTGAAAACGCAAAAGACCTTATCAGGAAA-ATGCTTGA 1148
Query 885 TCCAGATCCAAG-GCGTCGTCTAACAGCTCAACAAGTGCTTGATCATCCGTGGATACAGA 943
||| || |||| ||||||||| |||||||||||||| || ||||| |||||| ||||||
Sbjct 1149 TCCTGA-CCAAAAGCGTCGTCTTACAGCTCAACAAGTCCTAGATCACCCGTGGTTACAGA 1207
Query 944 ATGGTAAGA-ATGCTTCCAATGTATCATTGGGTGAAACCGTAAGAGCAAGGCTT-AAGCA 1001
||| |||| | || |||||||||||||||||||||| || || |||||| || |||||
Sbjct 1208 ATGCAAAGACA-GCCCCCAATGTATCATTGGGTGAAACAGTGAGGGCAAGG-TTGAAGCA 1265
Query 1002 ATTCTCTGTTATGAACAAGCTCAAGAAAAGGGCACTCAGGGTTATTGCTGAGCATCTATC 1061
||| | || |||||||||||||||||| | |||||||||||||||||||||||| ||||
Sbjct 1266 GTTCACCGTCATGAACAAGCTCAAGAAACGAGCACTCAGGGTTATTGCTGAGCATTTATC 1325
Query 1062 GGTTGAAGAAACATCTTGCATAAAAGAAAGATTCCAAGTAATGGACACAAGC-AATAGAG 1120
| ||||||| | || | |||| |||| | |||||| |||||||||||||| || ||||
Sbjct 1326 AGATGAAGAAGCTTCAGGTATAAGAGAAGGGTTCCAAATAATGGACACAAGCCAA-AGAG 1384
Query 1121 GGAAGATTACCATCAACGAGCT-AGGAATCGGATTGCAGAAACTCGGG-ATTGTTGTTCC 1178
||||||||| |||| ||||||| | |||||| ||||||||||| || || | ||||
Sbjct 1385 GGAAGATTAACATCGACGAGCTTAA-AATCGGGTTGCAGAAACTTGGTCAT-GCCATTCC 1442
Query 1179 TCAAGATGACATT-CAAATATTGATGGACGCGGGAGATGTTGATAAAGATGGATACTTAG 1237
|||||||| || ||||| |||||||| || ||||| | |||| ||||||||| || |
Sbjct 1443 GCAAGATGAT-TTACAAATTTTGATGGATGCTGGAGACATCGATAGAGATGGATATTTGG 1501
Query 1238 AC-GTCAATGAATTTGTAGCCATATCGGTACACATCAGGAAGTTAGGCAACGACGAGCA- 1295
|| || | || ||| | ||||||||||||||| | ||||| | ||||| ||||||||
Sbjct 1502 ACTGTGAC-GAGTTTATTGCCATATCGGTACACCTAAGGAAAATGGGCAATGACGAGCAT 1560
Query 1296 CTTAAAGGAAGCCTTTACGTTCTTCGA-CAAAAACAAGAGTGGTTATATAGAAATACAAG 1354
|| || | |||| ||| ||||||| || ||||| ||| | || ||||| |||||| | |
Sbjct 1561 CTCAA-GAAAGCGTTTGCGTTCTTTGATCAAAA-CAATAACGGATATATCGAAATAGAGG 1618
Query 1355 AATTAAGAGATGCTTTGGCAGATGATA-TTGACACTACTAGTGAAGAAGTTGTCGAAGCC 1413
| ||||| || || ||| | || || | ||| || | |||||||||||||| || |||
Sbjct 1619 AGTTAAGGGAAGCCTTGTCTGACGA-ACTTGGTAC-A--AGTGAAGAAGTTGTTGATGCC 1674
Query 1414 ATTATCCTTGATGTCGACACCAATAAGGATGGGAA-AATAAGTTATGAAGAGTTTACAAC 1472
||||||| |||||| |||||| | |||||||| || ||||||||| ||||||||| |||
Sbjct 1675 ATTATCCGTGATGTTGACACCGACAAGGATGG-AAGAATAAGTTACGAAGAGTTTGTAAC 1733
Query 1473 GATGATGAAAACGGGAACGGATTGGAGAAAAGCTTCGAGGCAGTACTCGAGGGACCGGTT 1532
|||||||||||| ||||| |||||||||||||||||||| ||||||||||| || |||||
Sbjct 1734 GATGATGAAAACAGGAACAGATTGGAGAAAAGCTTCGAGACAGTACTCGAGAGAACGGTT 1793
Query 1533 TAAGAGTCTTAGCCTTAAGCTGATGCAAGATGGGTCCTTGCAG-TCTAATGGAGATACAA 1591
||| ||| | || || || ||||||||||||| ||| |||||| || ||||| |||||||
Sbjct 1794 TAACAGTATCAGTCTCAAACTGATGCAAGATGCGTCGTTGCAGGTC-AATGGTGATACAA 1852
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78814855650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5