BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483312
Length=2135
Score E
Sequences producing significant alignments: (Bits) Value
AT2G42230.2 | Symbols: | C-CAP/cofactor C-like domain-containi... 2704 0.0
AT3G57890.2 | Symbols: | Tubulin binding cofactor C domain-con... 1068 0.0
> AT2G42230.2 | Symbols: | C-CAP/cofactor C-like domain-containing
protein | chr2:17593411-17596629 REVERSE LENGTH=2067
Length=2067
Score = 2704 bits (1464), Expect = 0.0
Identities = 1645/1733 (95%), Gaps = 10/1733 (1%)
Strand=Plus/Plus
Query 1 TGTTCAAAGATCTGCAACTTC-TTCATAACTGTTCTCTCATTCTCT--TTCTCTGGTTTT 57
||||||||||||||||||||| |||||||| ||||| | |||||| |||||||| |||
Sbjct 2 TGTTCAAAGATCTGCAACTTCATTCATAACAGTTCT-T-TTTCTCTCGTTCTCTGG-TTT 58
Query 58 GAGGCATAATGACGGAAGAACTCATCGACCAATCACCACCACCTGACCCAGACCCGATT- 116
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 59 AAAGCATAATGACGGAAGAGCTCATCGACCAATCACCACCACCTGACCCAGACCCGATTC 118
Query 117 AAAACTCCGAATTTAGTAATCCACCCGAGACGTGTTCCTTTCGAGCACGGCCTTCTTCCG 176
|||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 119 AAAA-TTCGAATTTAATAATCCACCCAAGACGTGTTCCTTTCGAGCACGGCCTTCTTCCG 177
Query 177 ATCCAGAAGCTTGTTTTTACCGACCCGATTCAAACTCTAGCTCCGATCAAGCAAAAGCTA 236
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 178 ATCCAGAAGCTCGTTTTTACCGACCCGATTCAAACTCTAGCTCCGATCAAGCAAAAGTTA 237
Query 237 GCTGCTTCCGCAACGAATAACCGCGTCGGATCTGCTGCCATTTCCGATGCACTCTCGATC 296
||| ||| || |||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 238 GCTTCTTTGGCGACGAATCATCGCGTCGGATCTGCTGCCATTTCCGATGCACTCTCGATC 297
Query 297 TCCAATGACCATGCGCGGCTCGTTCTTGAAACTCTCGGTTCGGTGCTCCATTGCGAGACT 356
||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||
Sbjct 298 TCCGATGACCATGCGCGCCTCGTTCTCGAAACTCTCTCTTCGGTGCTCCATTGCGAGACT 357
Query 357 GACCCATTGGTTTTGGCCAAACCTGAGGAAGTTGATTCCGTCGGAGCTGATTTGAGGGAT 416
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 358 GACCCATTGGTTTTGGCCAAACCTGAGGAAGTTGATTCCGTGGGAGCTGATTTGAGGGAT 417
Query 417 CTGATATTGTTTCTCTACATTCAATCGTATAAGAAGTTGTTGCCTAGGACGCATAAGGAC 476
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 418 CTGATATTGTTTCTCTACATTCAATCGTATAAGAAGTTATTGCCTAGGACGCATAAAGAC 477
Query 477 TCTGCTTCTGTGGCTGATGTTTGGCCATCGACTTCTGCTTTTGATGGATACTTGTCAGCA 536
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 478 TCTGCTTCTGTGGCTGATGTTTGGCCTTCGACTTCTGCTTTTGATGGATACTTGTCGGCA 537
Query 537 TTATCTCCAATTCAGCTTGTTCGTAGCAACAGCCGTCGGTTTATGCCATCACCTACAGAT 596
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 538 TTATCTCCAATTCAGCTTGTTCGTAGCAACAGCCGTCGGTTTATGCCATCACCGACAGAT 597
Query 597 GAAGAAGCTCATCAATTATCGTATCTGCAAAAGCACATAGCAAATATTGTTGCTCTCCTT 656
|||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct 598 GAAGAAGCTCATCAATTATCGTATCTGCAAAAGCACATTGCAAATATTATTTCTCTCCTT 657
Query 657 GCAGAGCCTGGGGAGGGAGAAGGAGATGAATCTTTGGTCCTGTCTATGGAGAGTTTGGAG 716
|||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 658 GCAGAGCCTGTGGAGGGACAAGGAGATGATTCTTTGGTCCTGTCTATGGAGAGTTTGGAG 717
Query 717 CATATTGGGTTTCTTGTTCATTATGGTGATAAGGGATTTGATGTACCTTCTTTAAGCCAA 776
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 CACATTGGGTTTCTTGTTCATTATGGTGATAAGGGATTTGATGTACCTTCTTTAAGCCAA 777
Query 777 GCTAGTCCtttttttGCAAATTCTGATCCCAATATGCCCGCTGTCCCCGTTCCTGCTTCC 836
|||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 778 GCTACTCCTTTTTTTGCGAATTCTGATCCTGATATGCCCGCTGTCCCCGTTCCTGCTTCC 837
Query 837 CAAGTGAATGATTGGCTTCTCAAAGACATAGCTTCTGCCATAGAAAGCATTTCTGACAGA 896
||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||
Sbjct 838 CAAGTGAATGATTGGCTTCTCAAAGACATAGCTTCCGCCTTAGAAAGCATTTCTAACAGA 897
Query 897 ATTTCTGGAAAAGAAAATGGGGCATCTAATGCCTCTGATCAAG-ATGCTGCAATGGCAAA 955
|| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||| |
Sbjct 898 ATCTCTGGGAAAGAAAATGGGGCATCTAATGCCTCTGATC-AGAATGCTGCAATGGCTGA 956
Query 956 TTCTTTTGGAGCTCTTAATAAAGTTTCATCTAATGACAGAGGTCCGTGTATTATTGAGGG 1015
|||| || |||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 957 TTCTAGTGTAGCTCTTAATAAAGTTTCATCTAACGACAGAGGTCCATGTATTATTGAGGG 1016
Query 1016 AGTCTCTAAGACCTCACTTTTCAAGCAGGCTTCTGATCTTAAGGGTAGATCAGTGAAGGT 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 AGTCTCTAAGACCTCACTTTTCAAGCAGGCTTCTGATCTTAAGGGTAGATCAGTGAAGGT 1076
Query 1076 TGCCAATTGCCATGATTCTGTTATTTATCTGTTAGCACCATTGAGATATGCAACTGTGTA 1135
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1077 TGCCAATTGCCATGATTCTGTTATTTATCTGTTAGCGCCATTGAGATATGCAACTGTGTA 1136
Query 1136 TGGATGTTCTGATTCTACTATCATTCTGGGAGCTACTGGCAAGGCAGTAAGAGTTGAGCA 1195
||| |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||
Sbjct 1137 TGGGTGTTCTGATTCTACTATCGTTCTGGGAGCTGCTGGCAAGGCAGTAAAAGTTGAGCA 1196
Query 1196 TTGTGAGAGAGTTCATGTGATTGTAGCTACCAAACGAATCTGCATCGCCAATTGCCGTGA 1255
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1197 TTGTGAGAGAGTTCATGTGATTGTAGCTACCAAACGAATTTGCATCGCCAATTGCCGTGA 1256
Query 1256 ATGTGTGTTATTTTTGGGAGTCAATCAGCGACCTCTTATTGTTGGTGACAACCACAAACT 1315
||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1257 ATGTGTGTTCTTTTTGGGAGTCAATCAGCGACCTCTTATAGTTGGTGATAACCACAAACT 1316
Query 1316 ACAGGTTGCTCCATATAATACATTTTACTCACACTTGGAGGAGCACATAACCGAGGTAGG 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 ACAGGTTGCTCCATATAATACATTTTACTCACACTTGGAGGAGCACATAACCGAGGTAGG 1376
Query 1376 AATTCAGCCAACTATCAACAAATGGAATGAATCCTTGGCACTGGGAGCAGTTGATCCGCA 1435
||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||
Sbjct 1377 AATTCAGCCAACTATCAACAAATGGAACGAATCCTTGGCGCTCGGAGCAATTGATCCGCA 1436
Query 1436 TGACTCACTATCACATCCGACTGGTGCCTCTGATAAACAATCTGAACCGGCTTCTTGTGT 1495
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1437 TGACTCACTATCACATCCGACTGGTGCCTCTGATAAACAAGCTGAACCGGCTTCTTGTGT 1496
Query 1496 GGACCCTGACCAGTTCACTACCTTTTTGATTCCAAACTGGTTTGAGGGCGAAGCGCTTGG 1555
|||||||||||||||||||||||||||||| ||||||||||||| ||| || ||| ||||
Sbjct 1497 GGACCCTGACCAGTTCACTACCTTTTTGATCCCAAACTGGTTTGCGGGTGAGGCGATTGG 1556
Query 1556 TTCCACGAAAGACAATCCATTTCCATTGCCAGATGCATATAAGGCAGTGCAGCAGACAAA 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1557 TTCCACGAAAGACAATCCATTTCCATTGCCAGATGCATATAAGGCAGTGCAGCAGACAAA 1616
Query 1616 CCTTAAGAACTTAGAAGAAACAAGACAATCATTAAGAGAATCATCTCTTGAAGAAAACCG 1675
||||||||||||||| |||||||||||||| || |||||| || |||| |||||||||||
Sbjct 1617 CCTTAAGAACTTAGAGGAAACAAGACAATCCTTGAGAGAAACACCTCTCGAAGAAAACCG 1676
Query 1676 AAAACGAGAACTTACTACAGCGTTCCACATGCATTTCAAAGACTGGCTCTACG 1728
|||||||||||| |||||||||||||||||| |||||||||||||||| ||||
Sbjct 1677 AAAACGAGAACTCACTACAGCGTTCCACATGTATTTCAAAGACTGGCTATACG 1729
Score = 340 bits (184), Expect = 3e-92
Identities = 299/348 (86%), Gaps = 33/348 (9%)
Strand=Plus/Plus
Query 1808 ATA-GCAACTGGAAATATTCGGCAACTTTACTGCCTACAAGGCGACTAAAGACCAATGGC 1866
||| || || ||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 1725 ATACGCGACGGGAAATATTCGGCAACTTTACTGCCTACAAGGCGA-TTAAGACCAATGGC 1783
Query 1867 GATGGAAAATGTCAGAGTCACTGTAGAGTTCTCTTGATCCG-------T------TTTGC 1913
||| ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1784 GATTGAAAATGTCAGAGTCACTGTAGAGTTCTCTTGATCCGTTCCTTCTCAGAGATTTGC 1843
Query 1914 TAGCACGTTTGACATCAGAACTTAAATGCACAGCACTCTCTCTAACTCCTAAAGCTCTG- 1972
|||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||
Sbjct 1844 TAGCACGTTTGACATCAGAATTTAACTGCACAGCACGCTCTCTAACTCCTAAAGCTCTGT 1903
Query 1973 ----TT-TGTGTAGGTTTCTCTCTGCTTTGATCATATTTATTAGTTTTAAATATCCACGT 2027
|| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||
Sbjct 1904 TTTTTTGTGTGTAGGTTTCTCTCTGCTTTTATCGTATTTATTAGTCTTAAATATCCACGT 1963
Query 2028 TTTTGTCCTTGAAAAACATTATGCAACCTTGTCTTTTTAAGTGTTGATTTCTTTCAATTG 2087
||||||||||||||||||||| || | |||||||| || || | |||||||||||||||
Sbjct 1964 TTTTGTCCTTGAAAAACATTAAGCCATCTTGTCTTGTT--GT-T-GATTTCTTTCAATTG 2019
Query 2088 TTATAAGCAGATATCAACTTTGCTCAATACCATCTATATAAATCTTTT 2135
|||||| || | | ||| ||||||||||| ||||||||||||||
Sbjct 2020 TTATAA-CA-AC-T----TTT-CTCAATACCATATATATAAATCTTTT 2059
> AT3G57890.2 | Symbols: | Tubulin binding cofactor C domain-containing
protein | chr3:21438084-21441888 FORWARD LENGTH=2210
Length=2210
Score = 1068 bits (578), Expect = 0.0
Identities = 996/1195 (83%), Gaps = 40/1195 (3%)
Strand=Plus/Plus
Query 551 GCTTGTTCGTAGCAACAGCCGTCGGTTTATGCCATCACCTACAGATGAAGAAGCTCATCA 610
||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct 802 GCTTGTTCGCAGCAACAGCCGTCGATTTATGCCATCACAGGCAGATGATGAAGCTCATCA 861
Query 611 ATTATCGTATCTGCAAAAGCACATAGCAAATATTGTTGCTCTCCTTGCAGAGCCTGGGGA 670
|| || ||||||||||| || ||||||| || || |||||||||||||||||| |||
Sbjct 862 GTTGTCATATCTGCAAAAACATTTAGCAAACATCATTTCTCTCCTTGCAGAGCCTGTGGA 921
Query 671 GGGAGAAGGAGATGAATCTTTGGTCCTGTCTATGGA-GAGTTTGGAGCATATTG-GGTTT 728
|||||||||||||||||| ||||| | |||||||| | | || |||||| || | |||
Sbjct 922 GGGAGAAGGAGATGAATCATTGGTTTTCTCTATGGAGGCG-TTCGAGCAT-CTGCGTTTT 979
Query 729 CTTGTTCA-TTATGGTGATAAGGGATTTGATGTACCTTCTTTAAGCCAAGCTAGTCCttt 787
|||||||| || |||||||||||||| ||||||| || | || |||||||||| ||||||
Sbjct 980 CTTGTTCAGTT-TGGTGATAAGGGATCTGATGTATCTCCATTGAGCCAAGCTACTCCTTT 1038
Query 788 ttttGCAAATTCTGATCCCAATATGCCCGCTGTCCCCGTTCCTGCTTCCCAAGTGAATGA 847
|||||||||||||||||| ||||||||||||| || || || |||||||||||| ||||
Sbjct 1039 TTTTGCAAATTCTGATCCGGATATGCCCGCTGTTCCAGTCCCCGCTTCCCAAGTGCATGA 1098
Query 848 TTGGCTTCT-CAAAGACATAGCTTCTGCCATAGAAAGCATTTCTGACAGAATTTCTGGAA 906
|||||||| |||| |||||||||| || ||||||||||| |||| |||||||||||||
Sbjct 1099 CTGGCTTCTGCAAA-ACATAGCTTCCGCTTTAGAAAGCATTACTGAGAGAATTTCTGGAA 1157
Query 907 AAGAAAATGGGGCATCTAATGCCTCTGATCAAGATGCTGCAATGGCAAATTCTTT-TGGA 965
|||| || || | ||||| | |||||||||| ||| ||| || | | ||| ||
Sbjct 1158 AAGAGAACGGACCTTCTAA-----C-GATCAAGATGATGCGATGTCAGA-TGTTTGTGCT 1210
Query 966 GCTCTTAATAAAGTTTCATCTAATGAC-AGAGGTCCGTGTATT-ATTGAGGGAGTCTCTA 1023
|||| || || ||| || ||| | || ||||| |||||| || || ||||||||||| |
Sbjct 1211 GCTCCGAACAAGGTTGCACCTAGT-ACTAGAGGCCCGTGT-TTAATCGAGGGAGTCTCCA 1268
Query 1024 AGACCTCACTT-TTCAAGCAGGCTTCTGATCTTAA-GGGTAGATCAGTGAAGGTTGCCAA 1081
|||| |||||| || ||||| || || |||| ||| ||||||||| |||||||||| |||
Sbjct 1269 AGACTTCACTTGTT-AAGCAAGCCTCCGATC-TAAGGGGTAGATCTGTGAAGGTTGTCAA 1326
Query 1082 TTGCCATGATTCTGTTATTTATCTGTTAGCACCATTGAGATATGCAACTGTGTATGGATG 1141
||||||||||||||| |||||||| |||||||||||| |||||||||||||| | |||||
Sbjct 1327 TTGCCATGATTCTGTAATTTATCTTTTAGCACCATTGCGATATGCAACTGTGCACGGATG 1386
Query 1142 TTCTGATTCTACTATCA-TTCTGGGAGCTACTGGCAAGGCAGTAAGAGTTGAGCATTGTG 1200
||||||| ||||||| | || |||||||| |||||||||| ||| ||||||||| ||||
Sbjct 1387 TTCTGATACTACTAT-AGTTTTGGGAGCTGTTGGCAAGGCAATAAAAGTTGAGCACTGTG 1445
Query 1201 AGAGAGTTCATGTGATTGTAGCTACCAAACGAATCTGCATCGCCAATTGCCGTGAATGTG 1260
| ||||||||||||||||||||| |||||||| | ||||| |||||||| ||||||||||
Sbjct 1446 AAAGAGTTCATGTGATTGTAGCTGCCAAACGAGTGTGCATTGCCAATTGTCGTGAATGTG 1505
Query 1261 TGTTATTTTTGGGAGTCAATCAGCGACCTCTTATTGTTGGTGACAACCACAAACTACAGG 1320
| || || ||||||||||||||||| || |||||||||||||| ||||||||||| ||||
Sbjct 1506 TATTCTTCTTGGGAGTCAATCAGCGGCCACTTATTGTTGGTGATAACCACAAACTGCAGG 1565
Query 1321 TTGCTCCATATAATACATTTTACTCACACTTGGAGGAGCACATAACCGAGGTAGGAATTC 1380
| ||||||||||||||||||||||| || ||||| |||||||| | |||||||| ||
Sbjct 1566 TCGCTCCATATAATACATTTTACTCTCATTTGGAAGAGCACATGAGGGAGGTAGGGCTTG 1625
Query 1381 AGCCAACTATCAACAAATGGAATGAATCC-TTGGCACTGGGAGCAGTTGATCCGCATGAC 1439
||||||| |||||||||||| | || || ||||| |||||||| || ||||| ||||||
Sbjct 1626 AGCCAACGATCAACAAATGGGA-CAAACCATTGGCCCTGGGAGCTGTGGATCCACATGAC 1684
Query 1440 TCACTATCACATCC-GACTGGTGCCT-CTGATAAACAATCTGAACCGGCTTCTTGTGTGG 1497
|| || |||||||| | | |||| | ||||| ||| ||||| | ||| ||| ||| |
Sbjct 1685 TCCCTGTCACATCCTG-CCGGTG-TTGCTGATGCACAGGCTGAATCAGCTGCTTCTGTAG 1742
Query 1498 ACCCTGACCAGTTCACT-ACCTTTTTGATTCCAAACTGGTTTGAG-GGCGAAGCGCTTGG 1555
|||||||||||||| | | ||||||||| |||||||||||| || |||| | ||||||
Sbjct 1743 ACCCTGACCAGTTC-GTAAACTTTTTGATCCCAAACTGGTTT-AGCGGCGCGGAGCTTGG 1800
Query 1556 TTCCACGAAAGACAATCCATTTCCATTGCCAGATGCATATAAGGCAG-TGCAGCAGACAA 1614
||| |||||||||||||||||||||||||||||||| |||| ||||| | ||||||| ||
Sbjct 1801 TTCGACGAAAGACAATCCATTTCCATTGCCAGATGCTTATATGGCAGCT-CAGCAGAGAA 1859
Query 1615 ACCTTAAGAACTTAGAAGAAACAAGACAATCATTAAGAGAATCATCTCTTGAAGAAAACC 1674
||||||||||||| ||||||||||||| ||| |||| ||| | |||| ||||||||||
Sbjct 1860 ACCTTAAGAACTTTGAAGAAACAAGACGATCGTTAAAAGAGGCGCCTCTAGAAGAAAACC 1919
Query 1675 GAAAACGAGAACT-TACTACAGCGTTCCACATGCATTTCAAAGACTGGCTCTACG 1728
| |||||||| || | | | || |||| | |||||||||||||||| ||||
Sbjct 1920 GGAAACGAGAGCTAT-CAAGTGCACTCCATGTTTATTTCAAAGACTGGCTTTACG 1973
Score = 440 bits (238), Expect = 2e-122
Identities = 372/436 (85%), Gaps = 12/436 (3%)
Strand=Plus/Plus
Query 122 TCCGAATTTAGTAATCCACCCGAGACGTGT-TCCTTTCGAGCACGGCCTTCTTCCGATCC 180
|||||||| ||||||||| || || ||||| | ||||||||||||| || || |||||||
Sbjct 265 TCCGAATTCAGTAATCCATCCAAGGCGTGTGT-CTTTCGAGCACGGACTCCTCCCGATCC 323
Query 181 AGAAGCTTGTTTTTACCGACCCGATTCAAA-CTCTAGCTCC-GATCAAGCAAAAGCTAGC 238
|||| || ||||| ||||||||||| |||| || |||| || | ||||||| ||||||||
Sbjct 324 AGAAACTCGTTTTCACCGACCCGATCCAAACCT-TAGCCCCTG-TCAAGCAGAAGCTAGC 381
Query 239 TGCTTCCGCAACGAATAACCGCGTCGGATCTGCTGCCATTTCCGATGCACTCTC-GATCT 297
| | | || ||||||||||||| ||||| ||||| || |||| | ||| | |||||
Sbjct 382 CGATGCGGCTTCGAATAACCGCGTTGGATCGGCTGCAATCGCCGACGTTCTC-CAGATCT 440
Query 298 CCAATGACCATGCGCGGCTCGTTCTTGAAACTCTCGGTTCGGTGCTCCATTGCGAGACTG 357
|| ||||||||||| |||||||| || ||||||||||||||||| |||| |||| |||
Sbjct 441 CCGGCGACCATGCGCGTCTCGTTCTCGAGACTCTCGGTTCGGTGCTTCATTCCGAGTCTG 500
Query 358 ACCCAT-TGGTTTTGGCCAAACCTGAGGAAGTTGATTCCGTCGGAGCTGATTTGAGGGAT 416
|||| | ||||| ||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 501 ACCC-TCTGGTTCGGGCGAAACCTGAGGAAGTTGATTCCGTCGGAGCTGATTTGCGGGAT 559
Query 417 CTGATATTGTTTCTCTACATTCAATCGTATAAGAAGTTG-TTGCCTAGGACGCATAAGGA 475
|| || ||||| || |||||||||||||||||||||||| || |||||||||||||||||
Sbjct 560 CTTATTTTGTTCCTGTACATTCAATCGTATAAGAAGTTGCTT-CCTAGGACGCATAAGGA 618
Query 476 CTCTGCTTCTGTGGCTGATGTTTGGCCATCGACTTCTGCTTTTGATGGATACTTGTCAGC 535
||| || | |||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 619 CTCCGCAGCGGTGGCTGATGTTTGGCCATCGACTTCAGCTTTTGATGGATACTTGTCTGC 678
Query 536 ATTATCTCCAATTCAG 551
||||| |||||||||
Sbjct 679 GTTATCGCCAATTCAG 694
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105872949405
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5