BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483320
Length=2144
Score E
Sequences producing significant alignments: (Bits) Value
AT2G42290.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3144 0.0
AT3G57830.1 | Symbols: | Leucine-rich repeat protein kinase fa... 990 0.0
> AT2G42290.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr2:17616841-17619593 REVERSE LENGTH=2213
Length=2213
Score = 3144 bits (1702), Expect = 0.0
Identities = 2008/2154 (93%), Gaps = 28/2154 (1%)
Strand=Plus/Plus
Query 1 CTTCACTGTTTATCGTTTTTCCTCGGCAACTTCTCGTTG-CT-TCACTATATGAATGATT 58
|||||||||||| ||||||||||| |||||||||||||| || |||||||||||| ||
Sbjct 1 CTTCACTGTTTACCGTTTTTCCTCTGCAACTTCTCGTTGCCTCACACTATATGAATCATC 60
Query 59 TGTAATTTGTAGCTTCTTTAACAAAC-AAAAGATTTCAAGATTCGTATATACTAACCaaa 117
|||||||||||||||||||||||| | ||||| ||||||||||| ||||| |||| | ||
Sbjct 61 TGTAATTTGTAGCTTCTTTAACAACCAAAAAG-TTTCAAGATTCCTATATCCTAAGC-AA 118
Query 118 aaaaTGAAGTTACTTTGGATT-TTCTCACTTCTTGTTTCTTCCATCTTTCTCTGCATTAG 176
||||||||||||| | |||| || |||||| ||||||||||||||||||||||||| ||
Sbjct 119 AAAATGAAGTTACCATCGATTCTT-TCACTTGTTGTTTCTTCCATCTTTCTCTGCATGAG 177
Query 177 CTTTTGCTCTTCTCTCAATTCCGACGGTTTATCTCTACTAGCTCTAAAATCCGCCGTCGA 236
||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 178 CTTTTGCTCCTCTCTCAATTCCGACGGTTTATCTCTCCTAGCTCTCAAATCCGCCGTCGA 237
Query 237 TAACGACCCGACCCGAGTAATGACTCACTGGTCTGAATCCGACCCGACTCCTTGCCATTG 296
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 238 TAACGACCCGACCCGAGTAATGACCCACTGGTCTGAATCCGACCCGACTCCTTGCCATTG 297
Query 297 GTCCGGAATCGTTTGCACAAAGGGCCGAGTCACTTCACTTGTCCTCTTCGCG-AAAAGTC 355
|||||||||||| |||||||| ||||||||||| | ||||| ||||||| | |||||||
Sbjct 298 GTCCGGAATCGTCTGCACAAACGGCCGAGTCACAACTCTTGTACTCTTCG-GAAAAAGTC 356
Query 356 TCTCCGGTTACATTCCATCAGAACTCGGTTTACTCAACTCGCTTAACCGGCTTGATCTAG 415
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 357 TCTCCGGTTACATTCCATCAGAACTCGGTTTACTCAACTCGCTAAACCGGCTTGATCTAG 416
Query 416 CTCACAACAATTTCTCCAAAACCGTACCGGTTCGACTCTTCGAAGCAACCAAGCTCCGGT 475
|||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||
Sbjct 417 CTCACAACAATTTCTCTAAAACCATACCGGTTCGTCTCTTCGAAGCAACCAAGCTCCGGT 476
Query 476 ACATCGATCTCTCTCACAACTCACTCTCCGGCCCAATTCCGGCCCAAATCAAATCCATGA 535
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 477 ACATCGATCTCTCTCACAACTCACTCTCCGGCCCAATACCGGCCCAAATCAAGTCCATGA 536
Query 536 AATCACTCAACCACCTTGATATCTCCTCCAATCATCTCAACGGGTCACTCCCTGAGTCAC 595
| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 537 AGTCACTCAACCACCTTGATTTCTCCTCCAATCATCTCAACGGTTCACTCCCTGAGTCAC 596
Query 596 T--C-G-A-----AAGCCTCGTCGGAACCTTAAATCTCTCTTTTAACCAATTCACCGGCG 646
| | | | |||||||||||||||||| ||| ||||||| ||||||||||||||||
Sbjct 597 TCACTGAACTCGGAAGCCTCGTCGGAACCTTGAATTTCTCTTTCAACCAATTCACCGGCG 656
Query 647 AGATTCCACCGTCGTACGGTCGATTTCCAGCTCACGTAAGCTTAGATTTTAGTCAAAACA 706
||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||
Sbjct 657 AGATTCCACCGTCGTACGGTCGATTTCGAGTTCACGTCAGCTTAGATTTTAGTCACAACA 716
Query 707 ATCTCACCGGAAAAGTACCTCAGGTGGGATCTCTGTTGAACCAAGGACCAAACGCATTCG 766
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 717 ATCTCACCGGAAAAGTACCTCAGGTGGGATCTCTGTTGAATCAAGGACCAAACGCATTCG 776
Query 767 CTGGAAACTATCATCTCTGTGGCTTTCCATTGCAAACACCGTGCGAAGAAATCGAAACCC 826
||||||||| ||||||||||||||| ||||||||||| ||||| ||| ||||| ||||||
Sbjct 777 CTGGAAACTCTCATCTCTGTGGCTTCCCATTGCAAACGCCGTGTGAAAAAATCAAAACCC 836
Query 827 CTAATTTCGCCAATGCAAAGCCGGAGGGAACTCAAGAACTCCAGAAACCAAACCCTAGTC 886
| ||||||| | |||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 837 CAAATTTCGTCGCTGCAAAGCCGGAAGGTACTCAAGAACTCCAGAAACCAAACCCTAGTG 896
Query 887 TAATCAGCAATGACGACGCAAAGCAGAAGAAGCAGCAGATCACCGGATCAGTAACAGTGT 946
||||||||||||||||||||||| |||||||||||||||||||||| |||||||| || |
Sbjct 897 TAATCAGCAATGACGACGCAAAGGAGAAGAAGCAGCAGATCACCGGTTCAGTAACCGTTT 956
Query 947 CTTTGATTTCTGGAGTATCGGTTGTAATCGGAGCTGTTTCTGTCTCGGTATGGCTTCTGA 1006
|| ||||||||||||| |||||||||||||||||||||||| |||| |||||| ||||
Sbjct 957 CTCTGATTTCTGGAGTTTCGGTTGTAATCGGAGCTGTTTCTCTCTCTGTATGG---CTGA 1013
Query 1007 TCCGGAGAAAACGAAGCTCCAACGGGTACAAATCGGAGACGAAGACGACGACGGTGGTTT 1066
|||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||||
Sbjct 1014 TCCGGAGAAAACGAAGCTCCGATGGGTACAATTCGGAGACAAAGACGACGACGGTGGTTT 1073
Query 1067 CAGAGTTTGACGAAGAAGGGCAAGAAGGTAAATTCGTAGCGTTTGACGAAGGATTCGAGC 1126
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1074 CAGAGTTCGACGAAGAAGGGCAAGAAGGTAAATTCGTAGCGTTTGATGAAGGATTCGAGC 1133
Query 1127 TCGAGCTTGAGGATTTGCTGGGAGCATCGGCTTACGTGATAGGCAAGAGCAGAAGTGGGA 1186
| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1134 TTGAGCTTGAGGATTTGCTGAGAGCATCGGCTTACGTGATAGGCAAGAGCAGAAGCGGGA 1193
Query 1187 TTGTGTACAGAGTAGTGGCGGCGGAATCGTCCTCCACTGTTGTCGCCGTTAGAAGGCTCA 1246
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1194 TTGTGTATAGAGTAGTGGCGGCGGAATCGTCCTCCACCGTTGTCGCCGTTAGAAGGCTCA 1253
Query 1247 ACGACGGCGATG-CTACGTGGCGGTTTAAGGATTTTGTGAATGAAGTTGAGAGCATTGGT 1305
||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1254 GCGACGGCAATGAC-ACGTGGCGATTTAAGGATTTTGTGAATGAAGTTGAGAGCATTGGT 1312
Query 1306 AGGATCAATCACCCTAACATCGTACGGCTTAGAGCTTACTACTATGCAGAGGACGAGAAG 1365
||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1313 AGGATCAATCATCCTAACATTGTACGGCTAAGAGCTTACTACTATGCAGAGGACGAGAAG 1372
Query 1366 CTTCTCATCACTGATTTCATTAGCAATGGCAGCTTGTACTCTGCCTTACATGGTGGACCT 1425
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1373 CTTCTCATCACTGATTTCATTAACAATGGCAGCTTGTACTCTGCCTTACATGGTGGACCT 1432
Query 1426 TTGAATACTCGGCCTACACTCTCTTGGGCTGAGAGGTTATGTATAGCTCAAGGAACTGCT 1485
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1433 TCGAATACTCGGCCTACACTCTCTTGGGCTGAGAGGTTATGTATAGCTCAAGGGACTGCT 1492
Query 1486 CGGGGTTTGATGTATATACATGAATACAGTTCGAGAAAGTATGTACACGGCAACCTAAAA 1545
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1493 CGGGGTTTGATGTATATACATGAATACAGTTCGAGAAAGTATGTTCACGGCAACCTAAAA 1552
Query 1546 TCAAGCAAAATCCTGTTAGATAATGAGCTGCATCCTCACATCTCAGGATTTGGTCTCACA 1605
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1553 TCAAGCAAAATCCTGTTAGATAATGAGCTGCATCCTCACGTCTCAGGATTTGGTCTCACA 1612
Query 1606 CGTCTGGTTTCCGGTTATCCCAAAGTTGA-TGATCATTCACCATCAACCAAAACGCAAAG 1664
|| ||||||||||| |||||||||| | | ||| ||||||| |||| ||| ||||||||
Sbjct 1613 CGACTGGTTTCCGGCTATCCCAAAG-TCACTGACCATTCACTATCATCCATGACGCAAAG 1671
Query 1665 CAAAGACCAAGCATTTGCCACAAGGCTCTCAGTCTCAGCTCCTGCAGCTGTTTACCTTGC 1724
| |||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 1672 TATAGACCAAGGATTTGCCACAAGACTCTCAGTCTCAGCTCCTGCAGCTGCTTACCTTGC 1731
Query 1725 ACCCGAAGCCCGAGTTTCATCTGGTTGCAAATCATTTCAGAAATGCGATGTTTATTCATT 1784
|||||||||||||| ||| |||| |||||||| || ||| ||||||||||||||||| ||
Sbjct 1732 ACCCGAAGCCCGAGCTTCTTCTGATTGCAAATTATCTCACAAATGCGATGTTTATTCTTT 1791
Query 1785 TGGGGTGATTCTATTGGAGTTGTTGACTGGTCGATTACCTAATGGTTCCTCTGAAAACGA 1844
||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1792 TGGTGTGATTCTATTGGAGCTGTTGACTGGTCGATTACCTTATGGTTCCTCTGAAAACGA 1851
Query 1845 A-G-G-AGAAGAACTCGTGAATGTTTTGAGGAATTGGCACAAGGAAGAGAGATCGTTGGC 1901
| | | ||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1852 AGGAGAAGAAGAACTCGTGAATGTTTTGAGGAAGTGGCACAAGGAAGAGAGATCTTTGGC 1911
Query 1902 TGAGATCTTAGACCCAAAGCTTCTGAAACAGGATTTTGCGGATAAGCAGGTTATTGCAAC 1961
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1912 TGAGATCTTAGACCCAAAGCTTCTGAAACAGGATTTTGCGAATAAGCAGGTTATTGCAAC 1971
Query 1962 CATTCATGTCGGTTTGAACTGCACGGAAATGGATCCAGATATGCGTCCTAGGATGAGATC 2021
||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1972 CATCCATGTCGCTTTAAACTGCACGGAAATGGATCCAGATATGCGTCCTAGGATGAGATC 2031
Query 2022 TGTGTCTGAAATTCTAGGTCGGATCAAATAGGAATAAACCTCTTTTTAAAGAGCCGGGAA 2081
||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct 2032 TGTGTCTGAAATTCTAGGTCGGATCAAATAGGAATTAACCACTTCTTAAAGAGCCGGGAT 2091
Query 2082 TAATTAGTTGTGTATGTGTTAGTCTCAGGCTAAGTGGAGTTTTGTAGTTTCTAT 2135
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2092 TAATTAGTTGTGTATGTATTAGTCTCAGGCTAAGTGGAGTTTTGTAGTTTCTAT 2145
> AT3G57830.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:21419517-21422546 FORWARD LENGTH=2476
Length=2476
Score = 990 bits (536), Expect = 0.0
Identities = 1559/2026 (77%), Gaps = 177/2026 (9%)
Strand=Plus/Plus
Query 143 CACTTCTTGTTTCTTCCAT-C-T-TTC-TCTGCATTAGCTTTTGCTCTTCTCTCAATTCC 198
||||||||||||||||| | | | ||| ||| ||| | ||| | ||| || || || |||
Sbjct 284 CACTTCTTGTTTCTTCC-TACTTCTTCTTCTTCATCAACTTCTCCTCCTCACTGAA-TCC 341
Query 199 -GACGGTTTATCTCTACTAGCTCTAAAATCCGCCGTCGATAAC--GACCCGACCCGAGTA 255
|| || || |||||||| ||||| |||||||| || | || |||||||| || |||
Sbjct 342 AGATGGGTTGTCTCTACTTGCTCTCAAATCCGCAATC--TTACGAGACCCGACACGTGTA 399
Query 256 ATGAC-TCACTGGTCTGAATCCGACCCGACTCCTTGCCATTGGTCC-GGAATCGTTTGCA 313
||||| || ||||||||| |||||||||||||| || || ||| || |||||| | ||||
Sbjct 400 ATGACTTC-CTGGTCTGAGTCCGACCCGACTCCATGTCACTGG-CCTGGAATCATCTGCA 457
Query 314 CAAAGGGCCGAGTCACTTCACTTGTCCTCTTCGCGAA-AAGTCTCTCCGGTTACATTCCA 372
|| | ||||||||||| ||||| || |||| || ||| ||| ||||| |||||||| ||
Sbjct 458 CACATGGCCGAGTCACCTCACTCGTTCTCTCCG-GAAGAAGACTCTCAGGTTACATACCC 516
Query 373 TC-AGAACTCGGTTTACTCAACTCGCT--TAACCGGCTTGATCTAGCTCACAACAATTTC 429
|| | |||||||| ||||| |||| || ||| || || || |||| |||||||||
Sbjct 517 TCTA-AACTCGGTCTACTCGACTCACTCATAA--AACTCGACCTTGCTCGTAACAATTTC 573
Query 430 TCCAAAACC-GTACCGGTTCGACTCTTCGAA-GCAACCAAGCTCCGGTACATCGATCTCT 487
| ||||||| || ||| ||| |||||| || || || ||||| ||||| |||||||
Sbjct 574 T-CAAAACCAGTGCCGACTCGTCTCTTC-AACGCCGTTAATCTCCGTTACATTGATCTCT 631
Query 488 CTCACAACTCACTCTCCGGCCCAATTCCGGCCCAAATCAAATCCATGAAATCA-CTCAAC 546
||||||||||| |||||||||||||||||||||||||| ||||| | || | ||| ||
Sbjct 632 CTCACAACTCAATCTCCGGCCCAATTCCGGCCCAAATCCAATCCCT-CAAGAATCTC-AC 689
Query 547 -CACCTTGATATCTCCTCCAATCAT-CTCAACGGGTCACTCCCT--G------AGTC-AC 595
||| ||||| |||||||||||| | |||||||| ||||||||| | | || ||
Sbjct 690 TCACATTGATTTCTCCTCCAATC-TACTCAACGGTTCACTCCCTCAGTCACTCACTCAAC 748
Query 596 TCGAAAGCCTCGTCGGAAC-CTTAAATCTCTCTTTTAACCA-ATTCACCGGCGAGATTCC 653
||| |||| | ||||| || | | |||||||||| || || ||| ||||||| |||||
Sbjct 749 TCGGAAGCTTAGTCGGCACAC-TCAATCTCTCTTACAA-CAGTTTCTCCGGCGAAATTCC 806
Query 654 ACCGTCGTACGGTCGATTTCCAGCTC-ACGTAAGCTTAGATTTTAGTCAAAACAATCTCA 712
|||||||| || || ||||||| || || ||||||||| | | || || |||||||
Sbjct 807 GCCGTCGTATGGCCGTTTTCCAG-TCTTTGTCAGCTTAGATCTCGGCCACAATAATCTCA 865
Query 713 CCGGAAAAGTACCTCAGGTGGGATCTCTGTTGAACCAAGGACCAAAC-GCATTCGCTGGA 771
|||||||| |||||||| | || ||||| || ||||||||||| ||| || ||||| |||
Sbjct 866 CCGGAAAAATACCTCAGATTGGCTCTCTCTTAAACCAAGGACC-AACAGCGTTCGCCGGA 924
Query 772 AACTATCATCTCTGTGGCTTT-CCATTGCA-AACACCGTGCGAAGA--AA--T-CGAAAC 824
|||| | | |||||||| ||| ||||| || || | ||| |||| || | || ||
Sbjct 925 AACTCTGAGCTCTGTGG-TTTCCCATTACAGAA-GCTGTGTAAAGATGAAGGTACG-AA- 980
Query 825 CCCTAATTTCGCCAATGCAAAGCCGGAGGGAACTCAAGA-ACT-CC--AGAAACCAAACC 880
|||||| ||| | | |||| || || || | ||| | || || ||||||||||||
Sbjct 981 CCCTAAGCTCGTCGCTCCAAAACCAGAAGGCTCGCAA-ATCCTCCCGAAGAAACCAAACC 1039
Query 881 CTAGTC-TAATCAG-CAATGACGACGCAAAGCAGAAGAAGCAGCAGATCACCGGATCAGT 938
|||| | | ||| | ||| | |||| ||| | ||||| | | |||||||||||| ||
Sbjct 1040 CTAG-CTTCATC-GACAA-G--GACG-GAAG-A-AAGAATAAACCGATCACCGGATCCGT 1091
Query 939 AACAGTGTCTTTGATTTCTGGAGTATCGGTTGTAATCGGAGCTGTTTCTGTCTCGGTATG 998
||| || ||| | || || ||||| || | ||||||||||| |||||| |||| |||||
Sbjct 1092 AACGGTTTCTCTCATCTCCGGAGTCTCAATCGTAATCGGAGCAGTTTCTATCTCCGTATG 1151
Query 999 GCTTCTGATCCGGAGAAAACGAAGCTCCAAC-G-G-GTACAAATCGGAGACGAAGACGAC 1055
| ||||| || |||||| ||||||| || | | |||| | |||| | || || ||
Sbjct 1152 G---CTGATTCGAAGAAAATTAAGCTCC-ACTGTGAGTAC--ACCGGA-A-AAAAACAAC 1203
Query 1056 GACGGTGGTTTCA---GA-G-TTTGAC-GA--AGAAGG-GCAA-GAAGGTAAATTCGTAG 1105
|||| || || || | | | | || || ||| | || |||||||||||||| |
Sbjct 1204 -ACGGCGGCGCCATTGGATGATGCGGCGGATGAGGAGGAG-AAGGAAGGTAAATTCGTGG 1261
Query 1106 CGTTTGACGAAGGATTCGAGCTCGAGCTTGAGGATTTGCTGGGAGCATCGGCTTACGT-G 1164
| | ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |
Sbjct 1262 TGATGGACGAAGGATTCGAGCTCGAGCTCGAGGATTTGCTGAGAGCATCGGCTTACGTCG 1321
Query 1165 ATAGGCAAGAGCAGAAGTGGGATTGTGTACAGAGTAGTGGC-GGC--GGAATC-G-TCC- 1218
| || ||||||||||||||||||||||||||||||||||| || || ||| | | |
Sbjct 1322 -TCGGAAAGAGCAGAAGTGGGATTGTGTACAGAGTAGTGGCCGGAATGGGATCAGGTACA 1380
Query 1219 -T--C--C-AC-T----GT--T-----GTCGCCG-T-T-AGAAGGCTCAA-CGACGGCGA 1256
| | | || | || | |||| | | | |||||||| || |||||| ||
Sbjct 1381 GTGGCGGCTACGTTTACGTCATCCACCGTCGTTGCTGTGAGAAGGCT-AAGCGACGGAGA 1439
Query 1257 TGCTACGTGGCGGTTTAAGGATTTTGTGAATGAAGTTGAGAGC-ATTGGTAG-GATC-AA 1313
||| ||||||||| |||||||| | |||||||| ||| || || |||| | || ||
Sbjct 1440 TGCCACGTGGCGGCGGAAGGATTTCGAAAATGAAGTGGAG-GCTATAAGTAGAG-TCCAA 1497
Query 1314 TCACCCTAACATCGTACGGCTTAGAGCTTACTACTATGCAGAGGACGAGAAGCTTCTC-A 1372
|| || || ||||||||||| |||||||| |||||||| |||||||||| ||| || |
Sbjct 1498 -CATCCAAATATCGTACGGCTAAGAGCTTATTACTATGCTGAGGACGAGAGGCT-CTTGA 1555
Query 1373 TCACTGATTTCATTA-GCAATGGCAGCTTGTACTCTGCCTTACATGGTGGACCTTTGAAT 1431
||||||||| ||| | |||| |||||||||||||||||||||||||||||||| | ||||
Sbjct 1556 TCACTGATTACAT-ACGCAACGGCAGCTTGTACTCTGCCTTACATGGTGGACCCTCGAAT 1614
Query 1432 ACTCGGCCTACACTCTCTTGGGCTGAGAGGTTA-TGTATAGCTCAAGGAACTGCTCGGGG 1490
|||| |||| ||||||||||| |||| || ||| | ||| || |||||||| ||||| ||
Sbjct 1615 ACTCTGCCTTCACTCTCTTGGCCTGAAAGATTACT-TATTGCACAAGGAACAGCTCGTGG 1673
Query 1491 TTTGATGTATATACATGAATACAGTTCGAGAAAGTATGTACACGGCAACCTAAAATCAAG 1550
||||||||||||||||| ||||| | |||||||| || || |||||||| |||||||
Sbjct 1674 CTTGATGTATATACATGAGTACAGCCCAAGAAAGTACGTTCATGGCAACCTGAAATCAAC 1733
Query 1551 CAAAATCCTG-TTAGATAATGAGCTGCAT-CCTCACATCTCAGGATTTGGTCTCACACGT 1608
|||||||||| || ||| |||| | | | |||| ||||||||| || ||||| ||||||
Sbjct 1734 CAAAATCCTGCTT-GATGATGAATTAC-TGCCTCGCATCTCAGGCTTCGGTCTTACACGT 1791
Query 1609 CTGGTTTCCGGTTA-TCCCAAAGTTGAT-GATCATTCACCATCAACCAAAACGCAAAGCA 1666
|||| || ||||| ||| ||| | || | | | | | ||| ||| || |||||||
Sbjct 1792 TTGGTATCAGGTTACTCC-AAACTC-ATCGGT--T-CGCTATCCGCCACAAGGCAAAGCT 1846
Query 1667 AAGACCAAGC--A-TT----T--GCCACAA-GGCTCTCA-G--TCTCAGCTCCTGCAGCT 1713
||||||| | | || | || |||| || | || | || ||||||| | | |
Sbjct 1847 TAGACCAAACCTACTTAACCTCTGCTACAACGG-TGACAAGAATCACAGCTCCCACTGTT 1905
Query 1714 GTTTACCTTGCACCCGAAGCCCGAGTTTCATCTGGTTGCAAATCATTTCAGAAATGCGAT 1773
| |||||||||||| || || || | ||| ||||||||||||| || |||||| ||||||
Sbjct 1906 GCTTACCTTGCACCTGAGGCTCGGGCTTCTTCTGGTTGCAAATTATCTCAGAAGTGCGAT 1965
Query 1774 GTTTATTCATTTGGGGT-GATTCTATTGGAGTTGTTGACTGGTCGATTACCTAATGGTTC 1832
|| ||||| |||||||| | | ||| |||||||||||||||| || || || |||| |||
Sbjct 1966 GTCTATTCGTTTGGGGTTG-TCCTAATGGAGTTGTTGACTGGCCGTTTGCCCAATGCTTC 2024
Query 1833 CTCTGAAAACGAA-GGAGAAGAACTCGTGAATGTTTTGAGGAATTGGCACAAGGAAGAGA 1891
|||| ||||| || || |||||||||||| |||| ||||||| ||| |||||||||||
Sbjct 2025 CTCTAAAAAC-AATGGCGAAGAACTCGTGCGTGTTGTGAGGAACTGGGTCAAGGAAGAGA 2083
Query 1892 GATC-GTTG-GCTGAGATCTTAGACCCAAAGCTTCTGAA-ACAGGATTTTGCGGATAAGC 1948
| | |||| | |||||| |||||||| || ||||||| | ||| | || |||||||
Sbjct 2084 -AGCCGTTGAG-TGAGATTTTAGACCCGGAGATTCTGAACAAAGG-TCACGCAGATAAGC 2140
Query 1949 AGGTTATTGCAACCATTCATGTCGGTTTGAACTGCACGGAAATGGATCCAGATATGCGTC 2008
| ||||||||| |||||||||||| |||||||||||||||||||||||||| | ||||
Sbjct 2141 AAGTTATTGCAGCCATTCATGTCGCCTTGAACTGCACGGAAATGGATCCAGAGGTTCGTC 2200
Query 2009 CTAGGATGAGATCTGTGTCTGAAATTCTAGGTCGGATCAAATAGGA 2054
| ||||||||||| |||||||| | ||| || |||||||||| |||
Sbjct 2201 CGAGGATGAGATCAGTGTCTGAGAGTCTCGGCCGGATCAAATCGGA 2246
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106324754310
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5