BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483345
Length=2155
Score E
Sequences producing significant alignments: (Bits) Value
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosp... 3417 0.0
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prot... 1679 0.0
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosp... 1384 0.0
> AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17704832-17708947
FORWARD LENGTH=2252
Length=2252
Score = 3417 bits (1850), Expect = 0.0
Identities = 2074/2177 (95%), Gaps = 36/2177 (2%)
Strand=Plus/Plus
Query 3 TTTTCTTTTCTATTGACGATTATAAAGTAAAAAGAGCAGCTTTGAGAATTTGATTGTTGA 62
|||| | ||||||||| ||||||||| |||| ||| |||||||||||||||||||||||
Sbjct 35 TTTTGTATTCTATTGAAGATTATAAACTAAAGGGAGGAGCTTTGAGAATTTGATTGTTGA 94
Query 63 TATCCAAGGATTTGGAAGCTTGTTTTGGTTTTAGGACGTTATACTTTTCGATTATGAGTG 122
|||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 95 TATCCAAGGATTTGCAAGCTAGTTTTTTTTTTACGACGTTATACTTTTCGATTATGAGTG 154
Query 123 CATCATGGGCTGATGTGGCTGACTCAGAGAACACGGGTTCTGGGTCTTCTAATCAGAATT 182
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 155 CATCATGGGCTGATGTAGCTGACTCAGAGAACACGGGTTCTGGGTCTTCTAATCAGAATT 214
Query 183 CTCATCCGTCACGACCTGCTTATGTTCCTCCACATCTAAGGAACAGGCCAGCCA-CTTCT 241
||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 215 CTCATCCTTCACGACCTGCTTATGTTCCTCCACATCTAAGGAACAGGCCAG-CAGCTTCT 273
Query 242 GAGCCTGTTGCTCCTTTACCAGCTAATGATCGTGTAGGCTT-TGGTGGTCCACCTTCTGG 300
|||||||||||||| || |||||||||||||||||||| || ||||||||||||||||||
Sbjct 274 GAGCCTGTTGCTCCATTGCCAGCTAATGATCGTGTAGG-TTATGGTGGTCCACCTTCTGG 332
Query 301 CTCTCGATGGGCTCCTGGTGGTAGTAGTGTTGGTG-T-----TGGTGGTGGTTATAGGGC 354
||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||
Sbjct 333 CTCTCGATGGGCTCCTGGTGGTAGTGGTGTTGGTGTTGGAGGTGGTGGTGGTTATAGGGC 392
Query 355 TGATGCAGGTCGCCCTGGCTCTGGCTATGGCTCTGGTGGACGAGGAGGTGGTGGTTGGAA 414
|||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 393 TGATGCAGGTCGTCCTGGCTCTGGCTCTGGCTATGGTGGACGAGGAGGTGGTGGTTGGAA 452
Query 415 CAACAGAAGTGGAGGCTGGGACCGTAGGGAACGTGAAGTAAACCCCTTTGATAATGATGA 474
||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 453 CAACAGAAGCGGAGGGTGGGACCGTAGGGAACGTGAAGTAAACCCCTTTGAAAATGATGA 512
Query 475 TTCCGAACCAGAACCAGCCTTTACTGAGCAGGATAATACCGTCATTAATTTTGACGCCTA 534
|||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct 513 TTCCGAACCAGAACCAGCTTTTACTGAGCAGGATAATACGGTTATTAATTTTGATGCCTA 572
Query 535 TGAAGATATTCCAATTGAGACCAGTGGGGATAATGTGCCTCCTCCTGTTAACACATTCGC 594
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 573 TGAAGATATTCCGATTGAGACCAGTGGGGATAATGTGCCTCCTCCTGTTAACACATTCGC 632
Query 595 AGAGATAGATCTCGGGGAGGCCTTGAATCTAAATATCCGTAGATGCAAATATGTTAAGCC 654
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 633 AGAGATAGATCTCGGGGAGGCATTGAATCTAAATATCCGTAGATGCAAATATGTTAAGCC 692
Query 655 AACACCTGTACAGCGTCATGCGATCCCGATATTGCTTGAAGGGAGGGATTTGATGGCCTG 714
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 693 AACACCTGTTCAGCGTCATGCGATTCCGATATTGCTTGAAGGGAGGGATTTGATGGCCTG 752
Query 715 TGCTCAGACAGGCTCTGGGAAGACAGCTGCTTTTTGCTTTCCAATTATTAGTGGGATAAT 774
|||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 753 TGCTCAGACAGGGTCGGGGAAGACAGCTGCTTTTTGCTTTCCAATCATTAGTGGAATAAT 812
Query 775 GAAAGATCAGCATGTACAGAGACCCCGTGGTTCACGAACAGTCTACCCTCTTGCAGTTAT 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 GAAAGATCAGCATGTACAGAGACCCCGTGGTTCACGAACAGTCTACCCTCTTGCAGTTAT 872
Query 835 TCTCTCACCAACAAGAGAGTTGGCAAGTCAGATACATGATGAGGCTAAAAAGTTCTCCTA 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 873 TCTCTCACCAACAAGAGAGTTGGCAAGTCAGATACATGATGAGGCTAAAAAGTTCTCTTA 932
Query 895 CCAAACTGGTGTGAAGGTGGTTGTTGCATATGGAGGAACACCTATTAACCAGCAGCTCCG 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 933 CCAAACTGGTGTGAAGGTGGTTGTTGCATATGGAGGAACACCTATTAACCAGCAGCTCCG 992
Query 955 GGAACTTGAGAGGGGAGTCGATATTCTTGTGGCAACTCCTGGTCGATTAAATGATTTGCT 1014
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 993 GGAACTTGAGAGGGGAGTCGATATTCTTGTGGCAACGCCTGGTCGATTAAATGATTTGCT 1052
Query 1015 CGAGAGAGCTAGAGTCTCTATGCAGATGATTAGATTTTTAGCTCTTGATGAGGCCGATAG 1074
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1053 CGAGAGAGCTAGAGTCTCAATGCAGATGATTAGATTTTTAGCTCTTGATGAGGCCGATAG 1112
Query 1075 AATGCTTGACATGGGTTTTGAACCACAAATTAGAAAGATTGTCGAACAAATGGACATGCC 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1113 AATGCTTGACATGGGTTTTGAACCACAAATTAGAAAGATTGTCGAACAAATGGACATGCC 1172
Query 1135 TCCACGTGGAGTTAGACAGACACTGTTGTTTAGTGCTACTTTTCCCAGAGAAATTCAGAG 1194
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1173 TCCACGTGGAGTTAGACAGACACTGTTGTTTAGTGCTACATTTCCAAGAGAAATTCAGAG 1232
Query 1195 ACTGGCAGCTGACTTCCTAGCAAATTATATATTTTTGGCTGTGGGTAGAGTGGGTTCAAG 1254
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1233 ACTCGCAGCTGACTTCCTAGCAAATTATATATTTTTGGCTGTGGGTAGAGTGGGTTCAAG 1292
Query 1255 TACCGATTTAATTGTCCAAAGGGTTGAGTTTGTCCTTGACTCTGACAAAAGAAGTCATCT 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1293 TACCGATTTAATTGTCCAAAGGGTTGAGTTTGTCCTTGACTCTGACAAAAGAAGTCATCT 1352
Query 1315 CATGGACCTGCTTCACGCTCAGAGAGAGAATGGCATCCAAGGCAAGCAAGCCCTGACCTT 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1353 CATGGACCTGCTTCACGCTCAGAGAGAGAATGGCATCCAAGGCAAGCAAGCCCTGACCTT 1412
Query 1375 AGTTTTTGTGGAGACAAAGAGGGGAGCTGACTCTTTGGAAAATTGGTTGTGCATCAATGG 1434
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1413 AGTTTTTGTGGAGACAAAGAGAGGAGCTGACTCTTTGGAAAATTGGTTGTGCATCAATGG 1472
Query 1435 GTTTCCAGCAACCTCCATTCACGGTGACAGAACACAGCAGGAAAGAGAAGTGGCACTGAA 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1473 GTTTCCAGCAACCTCCATTCACGGTGACAGAACACAGCAGGAAAGAGAAGTGGCATTGAA 1532
Query 1495 AGCCTTCAAGAGTGGGAGAACACCGATTTTGGTTGCAACAGATGTAGCAGCACGTGGCCT 1554
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1533 AGCCTTCAAGAGTGGGAGAACACCGATTTTGGTTGCAACTGATGTAGCAGCACGTGGCCT 1592
Query 1555 TGACATTCCCCACGTGGCTCATGTGGTCAACTTCGATCTACCAAATGACATTGATGACTA 1614
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1593 TGACATTCCCCACGTGGCTCATGTGGTCAACTTCGATCTGCCAAATGACATTGATGACTA 1652
Query 1615 TGTCCACCGTATTGGACGAACAGGACGTGCTGGCAAATCAGGACTAGCAACTGCTTTCTT 1674
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1653 TGTCCACCGTATTGGACGAACAGGACGTGCTGGCAAATCAGGACTAGCAACTGCCTTCTT 1712
Query 1675 CAACGATGGCAACACCTCACTGGCCAGACTGCTCGCTGAGCTGATGCAAGAAGCTAACCA 1734
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1713 CAACGATGGCAACACCTCACTGGCCAGACCGCTCGCTGAGCTGATGCAAGAAGCTAACCA 1772
Query 1735 GGAAGTCCCTGCGTGGCTCACACGGTATGCATCACGGTCTTCTTTTGGTGGTGGTAAGAA 1794
|||||||||| ||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct 1773 AGAAGTCCCTGAGTGGCTCACTCGGTATGCGTCACGGTCCTCTTTTGGTGGTGGTAAGAA 1832
Query 1795 CCGGCGGTCTGGTGGTCGGTTTGGTGGCCGTGACTTTAGAAGGGAAGGGTCTTTCGGTAg 1854
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1833 CCGGCGGTCTGGTGGTCGATTTGGTGGCCGTGACTTTAGAAGGGAAGGGTCTTTCGGTAG 1892
Query 1855 ----ag-g-agg-t--gg---tggaggaggaggatatggaggcggaggaggctatggtgg 1902
|| | ||| | || |||||||||||| ||||| ||||||||||||||||||||
Sbjct 1893 CGGTAGAGGAGGCTATGGCGGTGGAGGAGGAGGGTATGGCGGCGGAGGAGGCTATGGTGG 1952
Query 1903 cggaggaggatatggtggcggaggaggctatggcggtggaTATAGTGGTGCTCCAAGTGG 1962
|||||||| ||||| ||||||||||||||||| ||||||||| |||||||| |||||||
Sbjct 1953 TGGAGGAGGCTATGGCGGCGGAGGAGGCTATGGTGGTGGATATGGTGGTGCTTCAAGTGG 2012
Query 1963 TGGATATGGCGGAGAACCTCCAAGTGCTTGGGACTAAGCTCCCAATGttttttttttttt 2022
||||||||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 2013 TGGATATGGTGGAGAACCTCCAAGTGCTTGGGACTAAGCTTCCAATGTTCTTTTT----- 2067
Query 2023 GTTTTGGTTATAACTTTTGACaaaaaaa-T-T--CTTCTACATTCACGAAGAGAGAGTAT 2078
|||||||||| ||||||||||||||||| | | ||||||||||||| || |||||||||
Sbjct 2068 GTTTTGGTTACAACTTTTGACAAAAAAAATATTTCTTCTACATTCAC-AA-AGAGAGTAT 2125
Query 2079 GTATTGCCCCTTACACCTATGAGATTTCTTCACTGAAGAGATGGATATATAACAATTGTT 2138
|||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||
Sbjct 2126 GTATTGCCCCTTACACCTATGAGATTTC---ACTCAGGAGATGGATATATAACAATTGTT 2182
Query 2139 GATGTTTTAGGTGTTTT 2155
|||||||||||||||||
Sbjct 2183 GATGTTTTAGGTGTTTT 2199
> AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21639978-21643795 FORWARD LENGTH=2348
Length=2348
Score = 1679 bits (909), Expect = 0.0
Identities = 1487/1760 (84%), Gaps = 64/1760 (4%)
Strand=Plus/Plus
Query 197 CCTGCTTATGTTCCTCCACATCTAAGGAACAGGCCAGCCACTTCTGAGCCTG-T--TGCT 253
||| |||||||||| ||||| ||| |||||| | |||| || ||||||| | ||||
Sbjct 236 CCTCCTTATGTTCCCCCACACCTACGGAACA-G---GCCA--TCAGAGCCTGTTGCTGCT 289
Query 254 CCTTTACCAGC-TAATGATCGTGTAGGCTTTGGTGGTCCACCTTCTGGCTCTCGATGGGC 312
||||| ||| | ||||||| || ||| | |||||||| ||| |||| ||||| |||||
Sbjct 290 CCTTTGCCA-CAAAATGATCATGCAGGGTATGGTGGTCAACCAGCTGGGTCTCGTTGGGC 348
Query 313 TCCTGGT-G--GTAGTAGTGTTGGTG---TTGGTGGTGGTTATAGGGCTGATGCAGGTCG 366
|||| | | || | ||| ||||| || ||||| |||||| ||||| ||| ||
Sbjct 349 TCCTCCTAGCAGTGGGGGTGGTGGTGCCAGCGGCGGTGGCTATAGGAATGATGGAGGGCG 408
Query 367 CCCTGGCTCTGGCTATGGCT-CTGGTGGACGA---GGAGGTGGTGGT---TGGAACAACA 419
| |||||| ||| ||||| | |||| ||| || || ||||||||| ||||||||||
Sbjct 409 CACTGGCTATGGTTATGG-TGCTGGAGGAGGAGGTGGTGGTGGTGGTGGCTGGAACAACA 467
Query 420 GAAGTGGAGGCTGGGACCGTAGGGAACGTGAAGTAAACCCCTTTGATAATGATGATTCCG 479
|||||||||| ||||||||||||||||||||||||||||| |||| | |||||| | |
Sbjct 468 GAAGTGGAGGGTGGGACCGTAGGGAACGTGAAGTAAACCCATTTG--GA-GATGATGCTG 524
Query 480 AACCAGAACCAGCCTTTACTGAGCAGGATAATACCGTCATTAATTTTGACGCCTATGAAG 539
| |||||| | |||||| |||||||| ||||| | |||||||||||| ||||||||||
Sbjct 525 AGTTAGAACCGGTCTTTACAGAGCAGGAGAATACTGGCATTAATTTTGATGCCTATGAAG 584
Query 540 ATATTCCAATTGAGACCAGT-GGGGATAATGTGCCTCCTCCTGTTAACACATTCGCAGAG 598
|||||||| ||||||||||| ||||| | ||||| ||||||||||||||||| || ||
Sbjct 585 ATATTCCAGTTGAGACCAGTGGGGGA-GACGTGCCCCCTCCTGTTAACACATTTGCTGAC 643
Query 599 ATAGATCTCGGGGAGGCCTTGAATCTAAATATCCGTAGATGCAAATATGTTAAGCCAACA 658
|||||||| ||||| || || ||||| || ||||| || ||||| ||||| | |||||||
Sbjct 644 ATAGATCTTGGGGATGCATTAAATCTGAACATCCGGAGGTGCAAGTATGTGAGGCCAACA 703
Query 659 CCTGTACAGCGTCATGCGATCCCGATATTGCTTGAAGGGAGGGATTTGATGGCCTGTGCT 718
|| |||||||||||||| || || ||| |||||| || ||| |||||||||||||||||
Sbjct 704 CCGGTACAGCGTCATGCTATTCCAATACTGCTTGCAGAGAGAGATTTGATGGCCTGTGCC 763
Query 719 CAGACAGGCTCTGGGAAGACAGCTGCTTTTTGCTTTCCAATTATTAGTGGGATAATGAAA 778
||||| || ||||||||||| |||||||||||||||||||| |||||||| || ||||||
Sbjct 764 CAGACTGGGTCTGGGAAGACTGCTGCTTTTTGCTTTCCAATAATTAGTGGAATCATGAAA 823
Query 779 GATCAGCATGTACAGAGACCCCGTGGTTCACGAACAGTCTACCCTCTTGCAGTTATTCTC 838
|||||||||||| | ||||||||||||||||| | || |||||| ||||||| || |||
Sbjct 824 GATCAGCATGTAGAAAGACCCCGTGGTTCACGGGCGGTTTACCCTTTTGCAGTCATCCTC 883
Query 839 TCACCAACAAGAGAGTTGGCAAGTCAGATACATGATGAGGCTAAAAAGTTCTCCTACCAA 898
||||||||||| || |||||| | |||||||||||||| || ||||| ||||||||||||
Sbjct 884 TCACCAACAAGGGAATTGGCATGCCAGATACATGATGAAGCCAAAAAATTCTCCTACCAA 943
Query 899 ACTGGTGTGAAGGTGGTTGTTGCATATGGAGGAACACCTATTAACCAGCAGCTCCGGGAA 958
|||||||||||||| |||||||| |||||||||||||| ||| ||||||||||| |||||
Sbjct 944 ACTGGTGTGAAGGTTGTTGTTGCTTATGGAGGAACACCCATTCACCAGCAGCTCAGGGAA 1003
Query 959 CTTGAGAGGGGA-GTCGATATTCTTGTGGCAACTCCTGGTCGATTAAATGATTTGCTCGA 1017
|| ||||||||| || ||||| ||||||||||||||||| || |||||||||||||| ||
Sbjct 1004 CTCGAGAGGGGATGT-GATATCCTTGTGGCAACTCCTGGCCGGTTAAATGATTTGCTTGA 1062
Query 1018 GAGAGCTAGAGTCTCTATGCAGATGATTAGATTTTTAGCTCTTGATGAGGCCGATAGAAT 1077
|||||||||||||| |||||||||||||| ||||||||||| |||||||| || || ||
Sbjct 1063 AAGAGCTAGAGTCTCAATGCAGATGATTAGGTTTTTAGCTCTAGATGAGGCAGACAGGAT 1122
Query 1078 GCTTGACATGGGTTTTGAACCACAAATTAGAAAGATTGTCGAACAAATGGACATGCCTCC 1137
||| |||||||||||||| ||||| |||||||||||||| || || ||||||||||||||
Sbjct 1123 GCTGGACATGGGTTTTGAGCCACAGATTAGAAAGATTGTTGAGCAGATGGACATGCCTCC 1182
Query 1138 ACGTGGAGTTAGACAGACACTGTTGTTTAGTGCTACTTTTCCCAGAGAAATTCAGAGACT 1197
|||||| || ||||||||| || |||| |||||||| ||||| || | |||||||||||
Sbjct 1183 ACGTGGGGTGAGACAGACAATGCTGTTCAGTGCTACATTTCCAAGTCAGATTCAGAGACT 1242
Query 1198 GGCAGCTGACTTCCTAG-CAAATTATATATTTTTGGCTGTGGGTAGAGTGGGTTCAAGTA 1256
|||||||| ||| | | |||| |||||||||||||||||||| ||||| |||||||| |
Sbjct 1243 TGCAGCTGATTTCAT-GTCAAACTATATATTTTTGGCTGTGGGAAGAGTTGGTTCAAGCA 1301
Query 1257 CCGATTTAATTGTCCAAAGGGTTGAGTTTGTCCTTGACTCTGACAAAAGAAGTCATCTCA 1316
| ||||||||| |||||||||||||||||||| || |||||||| ||||| |||||||
Sbjct 1302 CTGATTTAATTACCCAAAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGAAGCCATCTCA 1361
Query 1317 TGGACCTGCTTCACGCTCAGAGAGAGAATGGCATCCAAGGCAAGCAAGCCCTGACCTTAG 1376
|||||||||||||||| || | |||| | | | ||||| ||||||| | |||| ||||
Sbjct 1362 TGGACCTGCTTCACGCGCA-A-AGAG-A--G-ACCCAAGACAAGCAATCATTGACATTAG 1415
Query 1377 TTTTTGTGGAGACAAAGAGGGGAGCTGACT-CTTTGGAAAATTGGTTGTGCATCAATGGG 1435
|||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||| |
Sbjct 1416 TTTTTGTGGAGACAAAGAGGGGAGCTGA-TACTTTGGAAAATTGGCTGTGCATGAATGAG 1474
Query 1436 TTTCCAGCAACCTCCATTCACGGTGACAGAACACAGCAGGAAAGAGAAGTGGCACTGAAA 1495
|||||||||||||||||||| || || |||||||| ||||||||||||||||||||| |
Sbjct 1475 TTTCCAGCAACCTCCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTG-AG 1533
Query 1496 G-CCTTCAAGAGTGGGAGAACACCGATTTTGGTTGCAACAGATGTAGCAGCACGTGGCCT 1554
| ||||||| | |||||| ||||| ||||||||||||||||| || ||||||||||| ||
Sbjct 1534 GTCCTTCAAAACTGGGAGGACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGTCT 1593
Query 1555 TGACATTCCCCACGTGGCTCATGTGGTCAACTTCGATCTACCAAATGACATTGATGACTA 1614
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1594 TGACATTCCCCACGTGGCTCATGTTGTAAACTTCGATCTACCAAATGACATTGATGACTA 1653
Query 1615 TGTCCACCGTATTGGACGAACAGGACGTGCTGGCAAATCAGGACTAGCAACTGCTTTCTT 1674
|||||||||||| ||||||||||||||||| |||||||| ||| |||||||||| |||||
Sbjct 1654 TGTCCACCGTATCGGACGAACAGGACGTGCAGGCAAATCTGGAATAGCAACTGCCTTCTT 1713
Query 1675 CAACGATGG-CAACACCTCA-CTGGCCAGA-CTGCTCGCTGAGCTGATGCAAGAAGCTAA 1731
|||||| | ||| | || ||||| || | ||| |||||||| ||||||||||| ||
Sbjct 1714 CAACGA-GAACAATGCA-CAACTGGCTAGGTC-GCTTGCTGAGCTAATGCAAGAAGCCAA 1770
Query 1732 CCAGGAAGTCCCTGCGTGGCTCACACGGTATGCATCACG-GTCTTCTTTTGGTGGTGGTA 1790
|| || ||||| | |||||||||||| ||||| ||||| | |||| |||||||||||||
Sbjct 1771 TCAAGAGGTCCCCGAGTGGCTCACACGATATGCTTCACGTG-CTTCATTTGGTGGTGGTA 1829
Query 1791 AGAACCGGCGGTCTGGTGGTCGGTTTGGTGGCCGTGACTTTAGAAGGGAAGGGTCTTTCG 1850
|||| ||| ||||||||||||||||||||||||||||| ||||||||||| |||| |
Sbjct 1830 AGAAACGG---TCTGGTGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAAGGCTCTTACA 1886
Query 1851 GTAgaggaggtggtggaggaggaggatatggaggcgg-ag-gagg-ctatggtggcggag 1907
|||||||||| || || || || ||| |||||||| || || |||||| |||||
Sbjct 1887 GTAGAGGAGGAGGCGGCGGCGGCGGA---GGAGGCGGCAGTGATTACTATGG---CGGAG 1940
Query 1908 gaggatatggtggcggagga 1927
|||| |||||||| || |||
Sbjct 1941 GAGGCTATGGTGGTGGTGGA 1960
> AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21656504-21660532
FORWARD LENGTH=2341
Length=2341
Score = 1384 bits (749), Expect = 0.0
Identities = 1245/1481 (84%), Gaps = 48/1481 (3%)
Strand=Plus/Plus
Query 407 GGTTGGAACAACAGAAGTGGAGGCTGGGACCGTAGGGA-ACGTG-AAGTAAACCCCTTTG 464
|||||||| |||||||||||| ||||||||| |||| || || || | ||||| ||||
Sbjct 482 GGTTGGAATGCCAGAAGTGGAGGTTGGGACCGTCGGGATAC-TGAAACT-AACCCGTTTG 539
Query 465 ATAATGAT-G-ATTCCGAACCAGAACCAGCCT-TT-ACTGAGCAGGATAATACCGTCATT 520
||||||| | | | | ||| ||| | || || || |||||||| || || ||||||
Sbjct 540 GTAATGATGGAAAT--G---CAG-ACCCGGCTGTTAAC-GAGCAGGAAAACACTGTCATT 592
Query 521 AATTTTGACGCCTATGAAGATATTCCAATTGAGACCAGTGGGGATAATGTGCCTCCTCCT 580
|| ||||| ||||||||||||||||| || ||||| ||||||||||||||||| ||||||
Sbjct 593 AACTTTGAGGCCTATGAAGATATTCCCATCGAGACAAGTGGGGATAATGTGCCACCTCCT 652
Query 581 GTTAACACATTCGCAGAGATAGATCTCGGGGAGGCCT-TGAATCTAAATATCC-GTAGAT 638
||||| ||||| ||||||||||| ||||| || | || | ||||||||||||| | || |
Sbjct 653 GTTAATACATTTGCAGAGATAGACCTCGGAGAAG-CTCTCAATCTAAATATCCAG-AGGT 710
Query 639 GCAAATATGTTAAGCCAACACCTGTACAGCGTCATGCGA-TCCCGATATT-GCTTGAAGG 696
||||||| || ||||| || ||||| |||||| |||| | |||| ||||| || || |||
Sbjct 711 GCAAATACGTGAAGCCGACCCCTGTGCAGCGTAATGCAATTCCC-ATATTGGC-TGCAGG 768
Query 697 GAGGGATTTGATGGCCTGTGCTCAGACAGGCTCTGGGAAGACAGCTGCTTTTTGCTTTCC 756
|||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 769 AAGGGATTTGATGGCTTGTGCTCAGACAGGCTCTGGGAAGACAGCTGCCTTTTGTTTTCC 828
Query 757 AATTATTAGTGGGATAATGAAAGATCAGCATGTACAGAGACCCCGTGG--TTCACGAACA 814
|||||||||||||| ||||| ||||||||| || ||||||| ||||| ||| | |
Sbjct 829 GATTATTAGTGGGATTATGAAGGATCAGCATATAGAGAGACCACGTGGAGTTCGGGGA-- 886
Query 815 GTCTACCCTCTTGCAGTTATTCTCTCACCAACAAGAGAGTTGGCAAGTCAGATACATGAT 874
||||| |||||||| || ||||||||||||||||| || ||||| | ||||||||||||
Sbjct 887 GTCTATCCTCTTGCTGTCATTCTCTCACCAACAAGGGAATTGGCTTGCCAGATACATGAT 946
Query 875 GAGGCTAAAAAGTTCTCCTACCAAACTGGTGTGAAGGTGGTTGTTGCATATGGAGGAACA 934
|| || | |||||||||||| |||||||| ||||| || || ||||| || |||||||||
Sbjct 947 GAAGCCAGAAAGTTCTCCTATCAAACTGGAGTGAAAGTTGTGGTTGCTTACGGAGGAACA 1006
Query 935 CCTATT-AACCAGCAGCTCCGGGAACTTGAGAGGGGAGTCGATATTCTTGTGGCAACTCC 993
|| | | ||||| ||| | |||| ||||| || ||||| ||||||||||| ||||||||
Sbjct 1007 CC-AGTCAACCAACAGATTAGGGAGCTTGAAAGAGGAGTTGATATTCTTGTTGCAACTCC 1065
Query 994 TGGTCGATTAAATGATTTGCTCGAGAGAGCTAGAGTCTCTATG-CAGATGATTAGATTTT 1052
||| |||||||||||||||| ||||||| ||||||||| || |||||| | ||||| |
Sbjct 1066 TGGGAGATTAAATGATTTGCTTGAGAGAGGTAGAGTCTC-ATTACAGATGGTAAGATTCT 1124
Query 1053 TAGCTCTTGATGAGGCCGATAGAATGCTTGACATGGGTTTTGAACCACAAATTAGAAAGA 1112
| || ||||||||||| || |||||||| ||||||||||||||||||||||| || ||||
Sbjct 1125 TGGCACTTGATGAGGCGGACAGAATGCTGGACATGGGTTTTGAACCACAAATCAGGAAGA 1184
Query 1113 TTGT-CGAACAAATGGACATGCCTCCACGTGGAGTTAGACAGACACTGTTGTTTAGTGCT 1171
| || | | || |||||||||||||| | ||| || | |||||| ||||||| ||||||
Sbjct 1185 TCGTTC-AGCAGATGGACATGCCTCCTCCTGGTGTCCGGCAGACAATGTTGTTCAGTGCT 1243
Query 1172 ACTTTTCCCAGAGAAATTCAGAGACTGGCAGCTGACTTCCTAGCAAATTATATATTTTTG 1231
|| ||||| || || || |||||||| ||| |||| || || ||||||| |||||| ||
Sbjct 1244 ACATTTCCTAGGGAGATACAGAGACTTGCATCTGATTTTCTTTCAAATTACATATTTCTG 1303
Query 1232 GCTGTGGGTAGAGTGGGTTCAAGTACCGATTTAATTGTCCAAAGGGTTGAGTTTGTCCTT 1291
||||| || ||||||||||||||||| ||||||||||||||||| || |||||||| | |
Sbjct 1304 GCTGTTGGAAGAGTGGGTTCAAGTACGGATTTAATTGTCCAAAGAGTAGAGTTTGTTCAT 1363
Query 1292 GACTCTGACAAAAGAAGTCATCTCATGGACCTGCTTCACGCTCAGAGAGAGAATGGCATC 1351
|| |||||||||||||| ||||| |||||||| ||||| || ||||| |||||||| | |
Sbjct 1364 GATTCTGACAAAAGAAGCCATCTAATGGACCTTCTTCATGCCCAGAGGGAGAATGGTAAC 1423
Query 1352 CAAGGCAAGCAAGCCCTGAC-CTTAGTTTTTGTGGAGACAAAGAGGGGAGCTGACTCTTT 1410
||||| |||||||| |||| || |||||||||||||||||||| |||||||||||||||
Sbjct 1424 CAAGGAAAGCAAGCTTTGACTCT-AGTTTTTGTGGAGACAAAGAAGGGAGCTGACTCTTT 1482
Query 1411 GGAAAATTGGTTGTGCATCAATGGGTTTCC-AGCAACCTCCATTCACGGTGACAGAACAC 1469
||| |||||||||||||||||||| ||||| |||||| ||||||| ||||| || |||
Sbjct 1483 GGAGAATTGGTTGTGCATCAATGG-TTTCCCAGCAACGACCATTCATGGTGATAGGTCAC 1541
Query 1470 AGCAGGAAAGAGAAGTGGCACTGAAAGCCTTCAAGAGTGGGAGAACACCGATTTTGGTTG 1529
| |||||||||||||||||||||| | | ||||||| |||| | ||||| ||||||||||
Sbjct 1542 AACAGGAAAGAGAAGTGGCACTGAGATCATTCAAGACTGGGCGGACACCTATTTTGGTTG 1601
Query 1530 CAACAGATGTAGCAGCACGTGGCCTTGACATTCCCCACGTGGCTCATGTGGTCAACTTCG 1589
|||| ||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| |
Sbjct 1602 CAACCGATGTGGCAGCACGTGGTCTTGACATTCCGCACGTGGCTCATGTAGTGAACTTTG 1661
Query 1590 ATCTACCAAATGACATTGATGACTATGTCCACCGTATTGGACGAACAGGACGTGCTGGCA 1649
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct 1662 ATCTACCAAACGACATTGATGACTATGTCCACCGTATCGGACGAACAGGACGTGCAGG-A 1720
Query 1650 AAT-CAGGACTAGCAACTGCTTTCTTCAACGATGGCAACACCTCACTGGCCA-GACTGCT 1707
||| ||||||||||||||||||||||||| || |||||| || |||||| | | ||
Sbjct 1721 AATTCAGGACTAGCAACTGCTTTCTTCAATGACAACAACACAACAATGGCCAAGCCA-CT 1779
Query 1708 CGCTGAGCTGATGCAAGAAGCTAACCAGGAAGTCCCTG-CGTGGCTCACACGGTATGCAT 1766
|||||||| |||||||||||||||||||| ||||||| | ||||| || || || ||||
Sbjct 1780 GGCTGAGCTAATGCAAGAAGCTAACCAGGAGGTCCCTGAC-TGGCTGACTCGATACGCAT 1838
Query 1767 CACG-GTCTTCTTTTGGTGGTGGTAAGAACCGGCGGTCTGGTGGTCGGTTTGGTGGCCGT 1825
| || | |||| ||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1839 CTCGTG-CTTCATTTGGAGGTGGTAAGAACCGGCGGTCTGGTGGACGGTTTGGTGGTCGT 1897
Query 1826 GACTTTAGAAGGGAAGGGTCTTTCGGTAgaggaggtggtgg 1866
||||| || || ||| ||||| || |||| ||||||||
Sbjct 1898 GACTTCAGGAGAGAA---TCTTTTAGTCGAGGCGGTGGTGG 1935
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106876960305
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5