BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483364
Length=1363
Score E
Sequences producing significant alignments: (Bits) Value
AT2G42690.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 2113 0.0
> AT2G42690.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:17776241-17777717 REVERSE LENGTH=1389
Length=1389
Score = 2113 bits (1144), Expect = 0.0
Identities = 1294/1367 (95%), Gaps = 8/1367 (1%)
Strand=Plus/Plus
Query 1 ACACACCATTTCTCTCTAATGGCTACAAC-A--ACATCATGGGAAGAGCTCTTAGGCTCA 57
||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||
Sbjct 18 ACACACCATTTCTCTCTAATGGCTACAACAACCACATCATGGGAAGAACTCTTAGGCTCA 77
Query 58 AAGAATTGGGACACTCTCCTAGACCCACTAGACCAATCACTTCGCGAACTCATTC-TCCG 116
||||||||||||||| || |||||||| |||||||||||||| | ||||||| || | ||
Sbjct 78 AAGAATTGGGACACTATCTTAGACCCATTAGACCAATCACTTAGGGAACTCA-TCTTACG 136
Query 117 TTGTGGCGATTTTTGTCAAGCCACCTACGATGCTTTCGTCAACGACCAAAACTCCAAGTA 176
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 137 TTGTGGCGACTTTTGTCAAGCCACCTACGATGCCTTCGTCAACGACCAAAACTCCAAGTA 196
Query 177 CTGTGGAGCCAGCCGCTACGGCAAATCTTCCTTCTTCGACAAGGTCATGCTCGAATCCGC 236
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 197 CTGTGGAGCCAGCCGCTACGGCAAATCTTCTTTCTTCGACAAGGTCATGCTCGAAAACGC 256
Query 237 TTCTGACTACGAGGTTGCAAACTTCCTCTACGCCACAGCTCGTGTTTCTCTCCCCCAAGG 296
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 257 TTCCGACTACGAGGTTGTAAACTTCCTCTACGCCACAGCTCGTGTTTCTCTCCCCGAAGG 316
Query 297 TTTGCTTCTCCAATCACAATCACGAGATTCTTGGGACCGTGAGTCTAATTGGTTTGGTTA 356
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||
Sbjct 317 TTTGCTTCTCCAATCACAATCAAGAGATTCTTGGGACCGTGAGTCTAACTGGTTTGGCTA 376
Query 357 CATTGCTGTCACGTCTGATGAACGGACTAAGGCTTTAGGACGCCGTGAGATCTATATAGC 416
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 377 CATTGCTGTCACGTCTGATGAACGGTCTAAGGCTTTAGGACGCCGTGAGATCTATATAGC 436
Query 417 TATGAGAGGAACGAGCAGGAACTATGAGTGGGTCAATGTTTTGGGTGCTAGGCCCACTTC 476
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 437 TTTGAGAGGAACGAGCAGGAACTATGAGTGGGTCAATGTTTTGGGTGCTAGGCCAACTTC 496
Query 477 AGCTGACCCGTTGCTGCACGGACCAGAGCAGGATGGTTCTGCTGGTGTGGTTGAAGGTAC 536
||||||||| |||||||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct 497 AGCTGACCCCTTGCTGCACGGACCCGAGCAGGATGGTTCTGGTGGTGTAGTTGAAGGTAC 556
Query 537 GACTTTTGATAGTGACAGTGAAGATGAAGAAGGGTGTAAGGTGATGCTCGGGTGGCTCAC 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 557 GACTTTTGATAGTGACAGTGAAGATGAAGAAGGGTGTAAGGTGATGCTCGGGTGGCTCAC 616
Query 597 TATCTATACATCTAATCACCCTGAATCGAAATTCACCAAGCTGAGTCTACGGTCACAGTT 656
|||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 617 AATCTATACTTCTAATCACCCCGAATCGAAATTCACTAAGCTGAGTCTACGGTCACAGTT 676
Query 657 GTTAGCTAAGATTAAGGAGCTTCTATTGAAGTATAAGGACGAGAAACCGAGTATTGTGTT 716
|||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 677 GTTAGCCAAGATCAAGGAGCTTCTGTTGAAGTATAAGGACGAGAAACCGAGCATTGTGTT 736
Query 717 GACTGGACACAGCTTGGGAGCTACAGAGGCTGTTCTCGCCGCCTATGATATAGCTGAGAA 776
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 737 GACTGGACATAGCTTGGGAGCTACAGAGGCTGTTCTGGCCGCCTATGATATAGCTGAGAA 796
Query 777 CGGTTCCAGTGATGATGTTCTGGTCACTGCTATAGTCTTTGGTTGTCCACAGGTAGGAAA 836
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 797 CGGTTCCAGTGATGATGTTCCGGTCACTGCTATAGTCTTTGGTTGTCCACAGGTAGGAAA 856
Query 837 CAAGGAGTTCAGAGACGAAGTAATGCGTCACAAGAACTTAAAGATCCTCCATGTAAGGAA 896
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 857 CAAGGAGTTCAGAGACGAAGTAATGAGTCACAAGAACTTAAAGATCCTCCATGTAAGGAA 916
Query 897 CACAATTGATCTCTTAACTCGATATCCAGGGGGACTTTTAGGGTATGTGGACATGGGAAT 956
||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 917 CACGATTGATCTCTTAACTCGATACCCAGGGGGACTTTTAGGGTATGTGGACATAGGAAT 976
Query 957 CAACTTTGTTATCAATACAAAGAAGTCACCGTTCCTAAAAGAATCAAGGAATCCGGGGGA 1016
|||||||| ||| |||||||||||||||||||||||| || ||||||||||| |||||
Sbjct 977 AAACTTTGTGATCGATACAAAGAAGTCACCGTTCCTAAGCGATTCAAGGAATCCAGGGGA 1036
Query 1017 TTGGCATAATCTTCAGGCAATGCTCCATATTGTTGCGGGATGGAATGGGAAGAAGGGAGA 1076
|||||||||||||||||| ||| | ||| |||| || ||||||||||||||||| |||||
Sbjct 1037 TTGGCATAATCTTCAGGCGATGTTACATGTTGTAGCTGGATGGAATGGGAAGAAAGGAGA 1096
Query 1077 GTTTAAACTGATGGTGAAGAGAAGTATTGCATTAGTGAACAAGTCATGCGAGTTCTTGAA 1136
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1097 GTTTAAACTGATGGTTAAGAGAAGTATTGCATTAGTGAACAAGTCATGCGAGTTCTTGAA 1156
Query 1137 AGATGAGTGTTTAGTGCCAGGATCTTGGTGGGTAGAGAAGAACAAAGGACTGATCAAGAA 1196
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157 AGCTGAGTGTTTGGTGCCAGGATCTTGGTGGGTAGAGAAGAACAAAGGACTGATCAAGAA 1216
Query 1197 CGAAGATGGTGAATGGGTTCTTGCTCCAGTTGAAGAAGAACCTGTACCTGAATTCTAAAC 1256
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1217 CGAAGATGGTGAATGGGTTCTTGCTCCCGTTGAAGAAGAACCTGTACCTGAATTCTAAAT 1276
Query 1257 TGTATTTCTGTATTATTGGTTCTAAGTTCATGTTAAATCAACAATAAGAAGTTCAACTGT 1316
|||||||||||||| || | ||||| ||||| ||||||||||||||| ||||||||| |
Sbjct 1277 TGTATTTCTGTATTTTTC-T-CTAAGGTCATGATAAATCAACAATAAGCAGTTCAACTAT 1334
Query 1317 GTGATGAAAAGACCCAAGTTATTTATATTGATATGAGTTTATGAGAT 1363
||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1335 GTGATGAAAAGACCCAAGTTATT-ATATTGATATGAGTTTATGAGAT 1380
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67118128665
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5