BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483403
Length=1985
Score E
Sequences producing significant alignments: (Bits) Value
AT2G43018.1 | Symbols: CPuORF17 | conserved peptide upstream op... 3147 0.0
AT2G43020.1 | Symbols: ATPAO2, PAO2 | polyamine oxidase 2 | chr... 3147 0.0
AT3G59052.1 | Symbols: CPuORF18 | conserved peptide upstream op... 1275 0.0
AT3G59050.1 | Symbols: ATPAO3, PAO3 | polyamine oxidase 3 | chr... 1275 0.0
> AT2G43018.1 | Symbols: CPuORF17 | conserved peptide upstream
open reading frame 17 | chr2:17891504-17894633 FORWARD LENGTH=2107
Length=2107
Score = 3147 bits (1704), Expect = 0.0
Identities = 1902/1995 (95%), Gaps = 23/1995 (1%)
Strand=Plus/Plus
Query 1 tttttttgttttctctctctagaag--tctctgttttcatctttctctctctagc-ct-t 56
||||||||||||||||||||||||| ||||||||||||||||||||||||| | || |
Sbjct 22 TTTTTTTGTTTTCTCTCTCTAGAAGTCTCTCTGTTTTCATCTTTCTCTCTCT--CTCTCT 79
Query 57 tgctcttctttctcgtttctggcgtttctGGGAATTTTGATCTATTTTGCCCCCATTGTT 116
||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||| |
Sbjct 80 AGCTCTTCTTCCTCGTTTCTGGCTTTTCTGGGAATTTTGATC-CTTTGGCCCCCATTGCT 138
Query 117 CTCTTGAAGTACGCATCCGATATCGCCGATCGTCGTAGATCTGCGTTGATATTAG-CCGG 175
| |||||| |||| ||| ||||||||||||||||||||||||||||||||| | | ||||
Sbjct 139 CGCTTGAATTACGAATCAGATATCGCCGATCGTCGTAGATCTGCGTTGATACT-GTCCGG 197
Query 176 CTGAGTaaaagcagagtgaacaaaaaccaaaaaca-a-agggggtttaaaaatcctgaag 233
|||||| ||| ||| |||||||||||||||||||| | |||||||||||||||||| |
Sbjct 198 CTGAGT-AAA-CAGGGTGAACAAAAACCAAAAACAGAGAGGGGGTTTAAAAATCCT---G 252
Query 234 aaaagagaaaTCGCATGAATTTGTTTGGAAGCCTGATTTTTTCATCTTCGATTTCGAGCC 293
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 253 --AAGA-AAATCGCATGAATTTGTTTGGAAGCCTGATTTTTTCATCTTCGATTTCGAGCC 309
Query 294 ACTTCACGACTTGTCTTCTCATATTTATTCTTCATTTCTCTCCTCAGCTtaattgtaata 353
|||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||
Sbjct 310 ACTTCACGACTTGTCTTCTCATCTTTATTCTTCATTTCTCTCCCCAGCTTAATAGTAATA 369
Query 354 ataataataataatagtaatcgtaattccaataatCTCGAGAGTAATCGTTTGATCAATT 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 370 ATAATAATAATAATAGTAATCGTAATTCCAATAATCTCGAGAGTAATCGTTTGATCAATT 429
Query 414 G---AATAAATCATGGAGTCTAGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGC 470
| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 430 GAAAAAAAAATCATGGAGTCCAGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGC 489
Query 471 TTTTCAGCTGGTGAGAGGATGAAGACAAGGTCTCCGTCCGTGATTGTGATCGGAGGTGGT 530
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 490 TTTTCAGCTGGTGAGAGGATGAAGACAAGGTCGCCCTCCGTGATTGTGATCGGAGGTGGT 549
Query 531 TTTGGTGGGATTTCAGCTGCTCGCACTCTTCAAGATGCTTCCTTTCAGGTTATGGTACTG 590
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 550 TTCGGTGGGATTTCAGCTGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTATGGTACTG 609
Query 591 GAGTCCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCTGTT 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 610 GAGTCCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCTGTT 669
Query 651 GATCTTGGTGCATCATGGCTGCATGGAGTATGCAAAGAGAATCCTCTGGCACCAGTAATT 710
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct 670 GATCTTGGTGCATCATGGCTGCATGGAGTATGCAAGGAGAATCCTCTCGCACCAGTTATT 729
Query 711 GGAAGACTGGGACTGCCCTTGTATCGTACTAGCGGTGACAATTCTGTCCTGTATGATCAT 770
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 730 GGAAGACTTGGACTGCCCTTGTATCGTACTAGCGGTGACAATTCCGTCCTGTATGATCAT 789
Query 771 GATCTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAGTTGGTA 830
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 790 GATCTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAATTGGTA 849
Query 831 ACTCAGATTGGCGTAACTTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAGGGATGAG 890
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 ACTCAGATTGGCGTAACGTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAGGGATGAG 909
Query 891 CAGGATGCAGACATTTCAATTTCTCAGGCTTTCTCAATTGTCTTTGCTAGGAAACCCGAG 950
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 910 CAGGATGCTGACATTTCAATTTCTCAGGCTTTCTCAATTGTCTTTTCTAGGAAACCCGAG 969
Query 951 CTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTATGTATGCCGCATGGAAGGA 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 970 CTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTATGTATGCCGCATGGAAGGA 1029
Query 1011 TGGTTTGCTGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGAGGAATTGCTG 1070
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1030 TGGTTTGCCGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGAGGAATTGTTG 1089
Query 1071 CCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAACACTCTGGCGAAA 1130
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1090 CCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAATACTCTGGCGAAA 1149
Query 1131 GGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCAGGCGTTACAATGGGGTG 1190
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1150 GGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCAGGCGGTACAATGGAGTG 1209
Query 1191 AAGGTAACGACAGAAAACGGGGAAACATTTGTTGCGGATGCTGCAGTCATTGCGGTTCCT 1250
||||||||||||||||||||| |||| |||||||||||||||||||||||||| || |||
Sbjct 1210 AAGGTAACGACAGAAAACGGGCAAACTTTTGTTGCGGATGCTGCAGTCATTGCTGTCCCT 1269
Query 1251 CTCGGAGTCTTAAAATCTGGAACCATAAAGTTCGAACCAAAGCTACCTGAGTGGAAACAA 1310
|| ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1270 CTTGGAGTTTTAAAATCGGGAACCATAAAGTTCGAACCTAAGCTACCTGAGTGGAAACAA 1329
Query 1311 GAAGCAATCAACGACCTAGGAGTAGGTATCGAGAACAAGATCATACTACATTTTGAGAAA 1370
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1330 GAAGCAATCAACGACCTAGGAGTAGGTATTGAGAACAAGATCATACTACATTTTGAGAAA 1389
Query 1371 GTCTTCTGGCCGAAAGTAGAGTTTCTAGGAGTGGTAGCTGAAACCTCCTACGGTTGCAGT 1430
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1390 GTCTTTTGGCCGAAAGTAGAGTTTCTAGGAGTGGTAGCTGAAACCTCCTACGGTTGCAGT 1449
Query 1431 TATTTTTTGAACCTGCACAAGGCCACAGGTCATCCAGTTCTGGTTTACATGCCGGCTGGT 1490
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1450 TATTTTTTGAACCTGCACAAGGCCACGGGTCATCCGGTTCTGGTTTACATGCCGGCTGGT 1509
Query 1491 CAGCTCGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAAATTTTGCCGTCTTG 1550
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1510 CAGCTTGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAAATTTCGCCGTCTTG 1569
Query 1551 CAACTCCAGAGAATTCTTCCCGATGCATTGCCTCCAGTTCAATATCTTGTATCGAGGTGG 1610
||||||||||||||||||||||||||||||||||| || || ||||| || |||||||||
Sbjct 1570 CAACTCCAGAGAATTCTTCCCGATGCATTGCCTCCGGTACAGTATCTCGTGTCGAGGTGG 1629
Query 1611 GGATCGGATGTGAATTCAATGGGATCTTATAGCTATGATATCGTGGGGAAACCTCATGAG 1670
||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1630 GGATCTGATGTGAATTCAATGGGATCTTATAGCTATGATATCGTGGGCAAACCTCATGAT 1689
Query 1671 CTCTACGAGAGGCTTAGGGTTCCAGTGGATAACTTATTCTTTGCCGGTGAAGCGACAAGC 1730
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1690 CTCTACGAGAGGCTTAGGGTTCCAGTGGATAACTTATTCTTTGCCGGTGAAGCGACGAGC 1749
Query 1731 TCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGATTGATGGCAGCTGAAGAA 1790
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1750 TCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGATTGATGGCAGCTGAAGAT 1809
Query 1791 TGTAGGATGCGAGTTTTGGAGCGGTATGGTGAGTTGGATCTGTTCCAGCCTGTGATGGGC 1850
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 TGTAGGATGCGAGTTCTGGAGCGGTATGGTGAGTTGGATCTGTTCCAGCCTGTGATGGGC 1869
Query 1851 GAGGAAGGACCTGCCTCTGTTCCTCTTCTTATATCTCGTCTCTAAACTCCATCAGTTATC 1910
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1870 GAGGAAGGACCTGCCTCTGTACCTCTTCTTATATCTCGTCTCTAAACTCCATCAGTTATC 1929
Query 1911 GTTTACTTACAAAGAACCTCAAGTGATGCTGGTCTTAATTTGAAACTAAAGCTATTCTCG 1970
||||||| | || ||||||||||||||| | |||||||| |||||||||| ||||||||
Sbjct 1930 GTTTACT-AGAAGGAACCTCAAGTGATGATTGTCTTAATATGAAACTAAAATTATTCTCG 1988
Query 1971 TATCGGATCGGTTAA 1985
| |||||||| ||||
Sbjct 1989 TGTCGGATCGTTTAA 2003
> AT2G43020.1 | Symbols: ATPAO2, PAO2 | polyamine oxidase 2 | chr2:17891503-17894635
FORWARD LENGTH=2110
Length=2110
Score = 3147 bits (1704), Expect = 0.0
Identities = 1902/1995 (95%), Gaps = 23/1995 (1%)
Strand=Plus/Plus
Query 1 tttttttgttttctctctctagaag--tctctgttttcatctttctctctctagc-ct-t 56
||||||||||||||||||||||||| ||||||||||||||||||||||||| | || |
Sbjct 23 TTTTTTTGTTTTCTCTCTCTAGAAGTCTCTCTGTTTTCATCTTTCTCTCTCT--CTCTCT 80
Query 57 tgctcttctttctcgtttctggcgtttctGGGAATTTTGATCTATTTTGCCCCCATTGTT 116
||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||| |
Sbjct 81 AGCTCTTCTTCCTCGTTTCTGGCTTTTCTGGGAATTTTGATC-CTTTGGCCCCCATTGCT 139
Query 117 CTCTTGAAGTACGCATCCGATATCGCCGATCGTCGTAGATCTGCGTTGATATTAG-CCGG 175
| |||||| |||| ||| ||||||||||||||||||||||||||||||||| | | ||||
Sbjct 140 CGCTTGAATTACGAATCAGATATCGCCGATCGTCGTAGATCTGCGTTGATACT-GTCCGG 198
Query 176 CTGAGTaaaagcagagtgaacaaaaaccaaaaaca-a-agggggtttaaaaatcctgaag 233
|||||| ||| ||| |||||||||||||||||||| | |||||||||||||||||| |
Sbjct 199 CTGAGT-AAA-CAGGGTGAACAAAAACCAAAAACAGAGAGGGGGTTTAAAAATCCT---G 253
Query 234 aaaagagaaaTCGCATGAATTTGTTTGGAAGCCTGATTTTTTCATCTTCGATTTCGAGCC 293
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 254 --AAGA-AAATCGCATGAATTTGTTTGGAAGCCTGATTTTTTCATCTTCGATTTCGAGCC 310
Query 294 ACTTCACGACTTGTCTTCTCATATTTATTCTTCATTTCTCTCCTCAGCTtaattgtaata 353
|||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||
Sbjct 311 ACTTCACGACTTGTCTTCTCATCTTTATTCTTCATTTCTCTCCCCAGCTTAATAGTAATA 370
Query 354 ataataataataatagtaatcgtaattccaataatCTCGAGAGTAATCGTTTGATCAATT 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATAATAATAATAATAGTAATCGTAATTCCAATAATCTCGAGAGTAATCGTTTGATCAATT 430
Query 414 G---AATAAATCATGGAGTCTAGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGC 470
| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 431 GAAAAAAAAATCATGGAGTCCAGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGC 490
Query 471 TTTTCAGCTGGTGAGAGGATGAAGACAAGGTCTCCGTCCGTGATTGTGATCGGAGGTGGT 530
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 491 TTTTCAGCTGGTGAGAGGATGAAGACAAGGTCGCCCTCCGTGATTGTGATCGGAGGTGGT 550
Query 531 TTTGGTGGGATTTCAGCTGCTCGCACTCTTCAAGATGCTTCCTTTCAGGTTATGGTACTG 590
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 551 TTCGGTGGGATTTCAGCTGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTATGGTACTG 610
Query 591 GAGTCCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCTGTT 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 GAGTCCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCTGTT 670
Query 651 GATCTTGGTGCATCATGGCTGCATGGAGTATGCAAAGAGAATCCTCTGGCACCAGTAATT 710
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct 671 GATCTTGGTGCATCATGGCTGCATGGAGTATGCAAGGAGAATCCTCTCGCACCAGTTATT 730
Query 711 GGAAGACTGGGACTGCCCTTGTATCGTACTAGCGGTGACAATTCTGTCCTGTATGATCAT 770
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 731 GGAAGACTTGGACTGCCCTTGTATCGTACTAGCGGTGACAATTCCGTCCTGTATGATCAT 790
Query 771 GATCTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAGTTGGTA 830
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 791 GATCTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAATTGGTA 850
Query 831 ACTCAGATTGGCGTAACTTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAGGGATGAG 890
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 851 ACTCAGATTGGCGTAACGTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAGGGATGAG 910
Query 891 CAGGATGCAGACATTTCAATTTCTCAGGCTTTCTCAATTGTCTTTGCTAGGAAACCCGAG 950
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 911 CAGGATGCTGACATTTCAATTTCTCAGGCTTTCTCAATTGTCTTTTCTAGGAAACCCGAG 970
Query 951 CTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTATGTATGCCGCATGGAAGGA 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 971 CTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTATGTATGCCGCATGGAAGGA 1030
Query 1011 TGGTTTGCTGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGAGGAATTGCTG 1070
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1031 TGGTTTGCCGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGAGGAATTGTTG 1090
Query 1071 CCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAACACTCTGGCGAAA 1130
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1091 CCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAATACTCTGGCGAAA 1150
Query 1131 GGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCAGGCGTTACAATGGGGTG 1190
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1151 GGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCAGGCGGTACAATGGAGTG 1210
Query 1191 AAGGTAACGACAGAAAACGGGGAAACATTTGTTGCGGATGCTGCAGTCATTGCGGTTCCT 1250
||||||||||||||||||||| |||| |||||||||||||||||||||||||| || |||
Sbjct 1211 AAGGTAACGACAGAAAACGGGCAAACTTTTGTTGCGGATGCTGCAGTCATTGCTGTCCCT 1270
Query 1251 CTCGGAGTCTTAAAATCTGGAACCATAAAGTTCGAACCAAAGCTACCTGAGTGGAAACAA 1310
|| ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1271 CTTGGAGTTTTAAAATCGGGAACCATAAAGTTCGAACCTAAGCTACCTGAGTGGAAACAA 1330
Query 1311 GAAGCAATCAACGACCTAGGAGTAGGTATCGAGAACAAGATCATACTACATTTTGAGAAA 1370
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1331 GAAGCAATCAACGACCTAGGAGTAGGTATTGAGAACAAGATCATACTACATTTTGAGAAA 1390
Query 1371 GTCTTCTGGCCGAAAGTAGAGTTTCTAGGAGTGGTAGCTGAAACCTCCTACGGTTGCAGT 1430
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1391 GTCTTTTGGCCGAAAGTAGAGTTTCTAGGAGTGGTAGCTGAAACCTCCTACGGTTGCAGT 1450
Query 1431 TATTTTTTGAACCTGCACAAGGCCACAGGTCATCCAGTTCTGGTTTACATGCCGGCTGGT 1490
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1451 TATTTTTTGAACCTGCACAAGGCCACGGGTCATCCGGTTCTGGTTTACATGCCGGCTGGT 1510
Query 1491 CAGCTCGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAAATTTTGCCGTCTTG 1550
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1511 CAGCTTGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAAATTTCGCCGTCTTG 1570
Query 1551 CAACTCCAGAGAATTCTTCCCGATGCATTGCCTCCAGTTCAATATCTTGTATCGAGGTGG 1610
||||||||||||||||||||||||||||||||||| || || ||||| || |||||||||
Sbjct 1571 CAACTCCAGAGAATTCTTCCCGATGCATTGCCTCCGGTACAGTATCTCGTGTCGAGGTGG 1630
Query 1611 GGATCGGATGTGAATTCAATGGGATCTTATAGCTATGATATCGTGGGGAAACCTCATGAG 1670
||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1631 GGATCTGATGTGAATTCAATGGGATCTTATAGCTATGATATCGTGGGCAAACCTCATGAT 1690
Query 1671 CTCTACGAGAGGCTTAGGGTTCCAGTGGATAACTTATTCTTTGCCGGTGAAGCGACAAGC 1730
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1691 CTCTACGAGAGGCTTAGGGTTCCAGTGGATAACTTATTCTTTGCCGGTGAAGCGACGAGC 1750
Query 1731 TCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGATTGATGGCAGCTGAAGAA 1790
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1751 TCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGATTGATGGCAGCTGAAGAT 1810
Query 1791 TGTAGGATGCGAGTTTTGGAGCGGTATGGTGAGTTGGATCTGTTCCAGCCTGTGATGGGC 1850
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811 TGTAGGATGCGAGTTCTGGAGCGGTATGGTGAGTTGGATCTGTTCCAGCCTGTGATGGGC 1870
Query 1851 GAGGAAGGACCTGCCTCTGTTCCTCTTCTTATATCTCGTCTCTAAACTCCATCAGTTATC 1910
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1871 GAGGAAGGACCTGCCTCTGTACCTCTTCTTATATCTCGTCTCTAAACTCCATCAGTTATC 1930
Query 1911 GTTTACTTACAAAGAACCTCAAGTGATGCTGGTCTTAATTTGAAACTAAAGCTATTCTCG 1970
||||||| | || ||||||||||||||| | |||||||| |||||||||| ||||||||
Sbjct 1931 GTTTACT-AGAAGGAACCTCAAGTGATGATTGTCTTAATATGAAACTAAAATTATTCTCG 1989
Query 1971 TATCGGATCGGTTAA 1985
| |||||||| ||||
Sbjct 1990 TGTCGGATCGTTTAA 2004
> AT3G59052.1 | Symbols: CPuORF18 | conserved peptide upstream
open reading frame 18 | chr3:21824696-21827509 REVERSE LENGTH=2039
Length=2039
Score = 1275 bits (690), Expect = 0.0
Identities = 1228/1485 (83%), Gaps = 48/1485 (3%)
Strand=Plus/Plus
Query 364 taatagtaat-cgtaattccaataatCTCGAGAGTAA-T-CGTTTGATCAATTGAATAAA 420
|||||||| | | ||||| |||||||| |||||||| | | | | || |||| | ||
Sbjct 279 TAATAGTAGTAC-TAATTTTAATAATCTTGAGAGTAATTAC-TCCGTTC-ATTG-TTGAA 334
Query 421 TCATGGAGT-C-TAGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGCTTTTCAGC 478
||||||||| | ||| |||| || ||||||| |||||| ||||| |||| | ||| |
Sbjct 335 TCATGGAGTCCGGAGGCAAAA--CTAATCGTCAGCTGCGTAAAGCTATTTGCGTCTCAAC 392
Query 479 TGGTGAGAGGATGAAG-ACAAG-G-TCTCCGTCCGTGATTGTGATCGGAGGTGGTTTTGG 535
| |||| ||||||| | ||| | || || || ||||| ||||| |||||||| | |||
Sbjct 393 AGACGAGAAGATGAAGAAGAAGAGATCACCTTCAGTGATAGTGATTGGAGGTGG-TATGG 451
Query 536 -TGGGATTTCAGCTGCTCGCACTCTTCAAGATGCTTCCTTTCAGGTTATGGTACTGGAGT 594
||| |||||||| |||||||||||||| |||||||||||||||||| | ||| ||||||
Sbjct 452 CTGGAATTTCAGCCGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTGTTGTATTGGAGT 511
Query 595 CCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCTGTTGATC 654
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 512 CTCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCAGTTGATC 571
Query 655 TTGGTGCATCATGGCTGCATGGAGTATGCAAAGAGAATCCTCTGGCACCAGTAATTGGAA 714
| |||||||| ||| ||||||| || || |||||||||||| |||| |||||||||| |
Sbjct 572 TCGGTGCATCTTGGTTGCATGGTGTCTGTAAAGAGAATCCTTTGGCTGCAGTAATTGGTA 631
Query 715 GACTGGGACTGCC-CTTGTATCGTACTAGCGGTGACAATTCTGTCCTGTATGATCATGAT 773
|| | ||| | || ||| ||||||||||||||||||||||| || |||||||||| |||
Sbjct 632 GATTAGGATTACCTCTT-TATCGTACTAGCGGTGACAATTCGGTTTTGTATGATCACGAT 690
Query 774 CTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAGTTGGTAACT 833
|| ||||| ||||||||||| || | || ||| ||||||||| ||||||||||||| ||
Sbjct 691 CTTGAGAGTTATGCTCTGTTCGACAAGGCTGGTAACCAAGTTTCTCAAGAGTTGGTGACA 750
Query 834 CA-GATTGGCGTAACTTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAGGGATGAGCA 892
| | |||||| || |||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct 751 AAAG-TTGGCGAAAATTTTGAGCACATTCTGGAAGAGATCTGTAAAGTCAGGGATGAGCA 809
Query 893 GGATGCAGACATTTCAATTTCTCAGGC-TTTCTCAATTGTCTTTGCTAGGAAACCC-GAG 950
||| | |||||| ||||| |||| || ||| || ||||| ||| ||||| ||| ||
Sbjct 810 GGACGAAGACATGTCAATAGCTCAAGCCTTT-TCTATTGTATTTAAGAGGAA-CCCTGAA 867
Query 951 CTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTA-TGTATGCCGCATGGAAGG 1009
||||||| ||||| ||||| || || || ||||| ||||| | | ||||||||||||||
Sbjct 868 TTGAGGTTGGAGGGACTTGCCCATAATGTGCTTCAGTGGTACT-TGTGCCGCATGGAAGG 926
Query 1010 ATGGTTTGCTGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGAGGAATTGCT 1069
|||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||| || |
Sbjct 927 ATGGTTTGCTGCTGATGCTGAAACCATCTCGGCAAAGTGTTGGGATCAGGAAGAACTGTT 986
Query 1070 GCCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAACACTCTGGCGAA 1129
||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 987 GCCCGGTGGACATGGTCTTATGGTTAGAGGGTATCGCCCTGTAATCAACACTCTCTCGAA 1046
Query 1130 AGGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCA-GGCGTTACAATGGGG 1188
|||||||||||| ||| || | ||||| |||| |||||| ||| |||| |||| ||| |
Sbjct 1047 AGGTCTTGATATACGACTAAGTCACAGAATTACCAAGATT-TCAAGGCGCTACAGTGGTG 1105
Query 1189 TGAAGGTAACGACAGA-AAACGGGGAAACATTTGTTGCGGATGCTGCAGTCATTGCGGTT 1247
||||||| || ||||| ||| || || || |||||||||||||||||||||||||| ||
Sbjct 1106 TGAAGGTGACTACAGAGAAA-GGAGACACGTTTGTTGCGGATGCTGCAGTCATTGCTCTT 1164
Query 1248 CCTCTCGGAGTCTTAAAATCTGGAACCATAA-AGTTCGAACCAAAGCTACCTGAGTGGAA 1306
||||| ||||||||||| || |||| |||| | |||||||||||||| || |||||||
Sbjct 1165 CCTCTAGGAGTCTTAAAGTCAGGAATGATAACA-TTCGAACCAAAGCTTCCACAGTGGAA 1223
Query 1307 ACAAGAAGCAATCAACGACCTAGGAGTAGGTATCGAGAACAAGATCATACT-ACATTTTG 1365
||||||||| |||||||| || || || || |||||||||||||||||| | | ||||||
Sbjct 1224 ACAAGAAGCTATCAACGATCTCGGTGTTGGAATCGAGAACAAGATCATATTGA-ATTTTG 1282
Query 1366 AGAAAGTCTTCTGGCCGAAA-GTAGAGTTTCTAGGAGTGGTAGCTGAAACCTCCTACGGT 1424
| || ||||| ||||| ||| ||||||||| ||||||| || || ||||| ||||||||
Sbjct 1283 ACAACGTCTTTTGGCC-AAACGTAGAGTTTTTAGGAGTCGTTGCAGAAACTTCCTACGGA 1341
Query 1425 TGCAGTTATTTTTTGAACCTGCACAAGGCCACAGGTCATCCAGTTCTGGTTTACATGCCG 1484
||||||||||| ||||||||||| || |||||| | ||||| || || ||||||||||||
Sbjct 1342 TGCAGTTATTTCTTGAACCTGCATAAAGCCACAAGCCATCCTGTCCTTGTTTACATGCCG 1401
Query 1485 GCTGGTCAGCTCGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAAATTTTGCC 1544
|||||||||||||| | |||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct 1402 GCTGGTCAGCTCGCTAGAGACATCGAGAAAAAGTCCGATGAAGCAGCTGCAAATTTTGCC 1461
Query 1545 GTCTT-GCAACTCCAGAGAATTCTTCCCGATGCAT-TGCCTCCAGTTCAAT-ATCTTG-T 1600
| || |||||| |||| ||||||||| ||||| | | | || | | ||| || ||| |
Sbjct 1462 TT-TTCGCAACTACAGAAAATTCTTCCAGATGCCTCTTCA-CC-GATAAATTAT-TTGGT 1517
Query 1601 ATCGAGGTGGGGATCGGATGTGAATTCAATGGGATCTTATAGCTATGATATCGTGGGGAA 1660
||| ||||||||||| || | |||||| ||||||| ||||||||||| || ||| ||
Sbjct 1518 ATCAAGGTGGGGATCAGACATCAATTCATTGGGATCATATAGCTATGACATTGTGAACAA 1577
Query 1661 ACCTCATGAGCTCTACGAGAGGCTTAGGGTTCCAGTGGATAA-CTTATTCTTTGCCGGTG 1719
|||||| || ||||| ||||| || || || ||| ||||||| || ||||||||| || |
Sbjct 1578 ACCTCACGACCTCTATGAGAGACTGAGAGTGCCATTGGATAATCT-ATTCTTTGCGGGGG 1636
Query 1720 AAGCGACAAGCTCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGATTGATGG 1779
|||| || ||||| |||| |||||| || || ||||| ||||||||||| ||| || |||
Sbjct 1637 AAGCCACTAGCTCAAGCTACCCGGGATCAGTGCACGGTGCTTATTCAACCGGAGTGCTGG 1696
Query 1780 CAGCTGAAGAATGTAGGATGCGAGTT-TTGGAGCGGTATGGTGAG 1823
|||||||||| || |||||||| || ||| |||| ||||| |||
Sbjct 1697 CAGCTGAAGACTGCAGGATGCGTGTGCTTG-AGCGCTATGGAGAG 1740
> AT3G59050.1 | Symbols: ATPAO3, PAO3 | polyamine oxidase 3 | chr3:21824696-21827509
REVERSE LENGTH=2039
Length=2039
Score = 1275 bits (690), Expect = 0.0
Identities = 1228/1485 (83%), Gaps = 48/1485 (3%)
Strand=Plus/Plus
Query 364 taatagtaat-cgtaattccaataatCTCGAGAGTAA-T-CGTTTGATCAATTGAATAAA 420
|||||||| | | ||||| |||||||| |||||||| | | | | || |||| | ||
Sbjct 279 TAATAGTAGTAC-TAATTTTAATAATCTTGAGAGTAATTAC-TCCGTTC-ATTG-TTGAA 334
Query 421 TCATGGAGT-C-TAGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGCTTTTCAGC 478
||||||||| | ||| |||| || ||||||| |||||| ||||| |||| | ||| |
Sbjct 335 TCATGGAGTCCGGAGGCAAAA--CTAATCGTCAGCTGCGTAAAGCTATTTGCGTCTCAAC 392
Query 479 TGGTGAGAGGATGAAG-ACAAG-G-TCTCCGTCCGTGATTGTGATCGGAGGTGGTTTTGG 535
| |||| ||||||| | ||| | || || || ||||| ||||| |||||||| | |||
Sbjct 393 AGACGAGAAGATGAAGAAGAAGAGATCACCTTCAGTGATAGTGATTGGAGGTGG-TATGG 451
Query 536 -TGGGATTTCAGCTGCTCGCACTCTTCAAGATGCTTCCTTTCAGGTTATGGTACTGGAGT 594
||| |||||||| |||||||||||||| |||||||||||||||||| | ||| ||||||
Sbjct 452 CTGGAATTTCAGCCGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTGTTGTATTGGAGT 511
Query 595 CCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCTGTTGATC 654
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 512 CTCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCAGTTGATC 571
Query 655 TTGGTGCATCATGGCTGCATGGAGTATGCAAAGAGAATCCTCTGGCACCAGTAATTGGAA 714
| |||||||| ||| ||||||| || || |||||||||||| |||| |||||||||| |
Sbjct 572 TCGGTGCATCTTGGTTGCATGGTGTCTGTAAAGAGAATCCTTTGGCTGCAGTAATTGGTA 631
Query 715 GACTGGGACTGCC-CTTGTATCGTACTAGCGGTGACAATTCTGTCCTGTATGATCATGAT 773
|| | ||| | || ||| ||||||||||||||||||||||| || |||||||||| |||
Sbjct 632 GATTAGGATTACCTCTT-TATCGTACTAGCGGTGACAATTCGGTTTTGTATGATCACGAT 690
Query 774 CTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAGTTGGTAACT 833
|| ||||| ||||||||||| || | || ||| ||||||||| ||||||||||||| ||
Sbjct 691 CTTGAGAGTTATGCTCTGTTCGACAAGGCTGGTAACCAAGTTTCTCAAGAGTTGGTGACA 750
Query 834 CA-GATTGGCGTAACTTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAGGGATGAGCA 892
| | |||||| || |||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct 751 AAAG-TTGGCGAAAATTTTGAGCACATTCTGGAAGAGATCTGTAAAGTCAGGGATGAGCA 809
Query 893 GGATGCAGACATTTCAATTTCTCAGGC-TTTCTCAATTGTCTTTGCTAGGAAACCC-GAG 950
||| | |||||| ||||| |||| || ||| || ||||| ||| ||||| ||| ||
Sbjct 810 GGACGAAGACATGTCAATAGCTCAAGCCTTT-TCTATTGTATTTAAGAGGAA-CCCTGAA 867
Query 951 CTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTA-TGTATGCCGCATGGAAGG 1009
||||||| ||||| ||||| || || || ||||| ||||| | | ||||||||||||||
Sbjct 868 TTGAGGTTGGAGGGACTTGCCCATAATGTGCTTCAGTGGTACT-TGTGCCGCATGGAAGG 926
Query 1010 ATGGTTTGCTGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGAGGAATTGCT 1069
|||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||| || |
Sbjct 927 ATGGTTTGCTGCTGATGCTGAAACCATCTCGGCAAAGTGTTGGGATCAGGAAGAACTGTT 986
Query 1070 GCCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAACACTCTGGCGAA 1129
||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 987 GCCCGGTGGACATGGTCTTATGGTTAGAGGGTATCGCCCTGTAATCAACACTCTCTCGAA 1046
Query 1130 AGGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCA-GGCGTTACAATGGGG 1188
|||||||||||| ||| || | ||||| |||| |||||| ||| |||| |||| ||| |
Sbjct 1047 AGGTCTTGATATACGACTAAGTCACAGAATTACCAAGATT-TCAAGGCGCTACAGTGGTG 1105
Query 1189 TGAAGGTAACGACAGA-AAACGGGGAAACATTTGTTGCGGATGCTGCAGTCATTGCGGTT 1247
||||||| || ||||| ||| || || || |||||||||||||||||||||||||| ||
Sbjct 1106 TGAAGGTGACTACAGAGAAA-GGAGACACGTTTGTTGCGGATGCTGCAGTCATTGCTCTT 1164
Query 1248 CCTCTCGGAGTCTTAAAATCTGGAACCATAA-AGTTCGAACCAAAGCTACCTGAGTGGAA 1306
||||| ||||||||||| || |||| |||| | |||||||||||||| || |||||||
Sbjct 1165 CCTCTAGGAGTCTTAAAGTCAGGAATGATAACA-TTCGAACCAAAGCTTCCACAGTGGAA 1223
Query 1307 ACAAGAAGCAATCAACGACCTAGGAGTAGGTATCGAGAACAAGATCATACT-ACATTTTG 1365
||||||||| |||||||| || || || || |||||||||||||||||| | | ||||||
Sbjct 1224 ACAAGAAGCTATCAACGATCTCGGTGTTGGAATCGAGAACAAGATCATATTGA-ATTTTG 1282
Query 1366 AGAAAGTCTTCTGGCCGAAA-GTAGAGTTTCTAGGAGTGGTAGCTGAAACCTCCTACGGT 1424
| || ||||| ||||| ||| ||||||||| ||||||| || || ||||| ||||||||
Sbjct 1283 ACAACGTCTTTTGGCC-AAACGTAGAGTTTTTAGGAGTCGTTGCAGAAACTTCCTACGGA 1341
Query 1425 TGCAGTTATTTTTTGAACCTGCACAAGGCCACAGGTCATCCAGTTCTGGTTTACATGCCG 1484
||||||||||| ||||||||||| || |||||| | ||||| || || ||||||||||||
Sbjct 1342 TGCAGTTATTTCTTGAACCTGCATAAAGCCACAAGCCATCCTGTCCTTGTTTACATGCCG 1401
Query 1485 GCTGGTCAGCTCGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAAATTTTGCC 1544
|||||||||||||| | |||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct 1402 GCTGGTCAGCTCGCTAGAGACATCGAGAAAAAGTCCGATGAAGCAGCTGCAAATTTTGCC 1461
Query 1545 GTCTT-GCAACTCCAGAGAATTCTTCCCGATGCAT-TGCCTCCAGTTCAAT-ATCTTG-T 1600
| || |||||| |||| ||||||||| ||||| | | | || | | ||| || ||| |
Sbjct 1462 TT-TTCGCAACTACAGAAAATTCTTCCAGATGCCTCTTCA-CC-GATAAATTAT-TTGGT 1517
Query 1601 ATCGAGGTGGGGATCGGATGTGAATTCAATGGGATCTTATAGCTATGATATCGTGGGGAA 1660
||| ||||||||||| || | |||||| ||||||| ||||||||||| || ||| ||
Sbjct 1518 ATCAAGGTGGGGATCAGACATCAATTCATTGGGATCATATAGCTATGACATTGTGAACAA 1577
Query 1661 ACCTCATGAGCTCTACGAGAGGCTTAGGGTTCCAGTGGATAA-CTTATTCTTTGCCGGTG 1719
|||||| || ||||| ||||| || || || ||| ||||||| || ||||||||| || |
Sbjct 1578 ACCTCACGACCTCTATGAGAGACTGAGAGTGCCATTGGATAATCT-ATTCTTTGCGGGGG 1636
Query 1720 AAGCGACAAGCTCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGATTGATGG 1779
|||| || ||||| |||| |||||| || || ||||| ||||||||||| ||| || |||
Sbjct 1637 AAGCCACTAGCTCAAGCTACCCGGGATCAGTGCACGGTGCTTATTCAACCGGAGTGCTGG 1696
Query 1780 CAGCTGAAGAATGTAGGATGCGAGTT-TTGGAGCGGTATGGTGAG 1823
|||||||||| || |||||||| || ||| |||| ||||| |||
Sbjct 1697 CAGCTGAAGACTGCAGGATGCGTGTGCTTG-AGCGCTATGGAGAG 1740
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98342867655
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5