BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483426
Length=1833
Score E
Sequences producing significant alignments: (Bits) Value
AT2G43200.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 2750 0.0
> AT2G43200.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr2:17958230-17960536
FORWARD LENGTH=1836
Length=1836
Score = 2750 bits (1489), Expect = 0.0
Identities = 1731/1846 (94%), Gaps = 23/1846 (1%)
Strand=Plus/Plus
Query 1 ATGAATCCATCACAACAACACTTATTC-AAGCTATGTCCTAAGCGTCTATTCTTCTTCTT 59
|||||||||||||||||||||||| | ||||||||||||||||| |||||| |||||||
Sbjct 1 ATGAATCCATCACAACAACACTTA-CCAAAGCTATGTCCTAAGCGCCTATTCCTCTTCTT 59
Query 60 CACTCCATTCCTATTCTTCTTC-CTCTATTACATCCTCACCACTATCAAAACCATCACCT 118
|||||||||| |||| ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 60 CACTCCATTCTTATTGTTC-TCTCTCTATTACATCCTCACCACTATCAAAACCATCACCA 118
Query 119 TCTCTTCCCAAGTTCCTCACCATCCTCCACAGATTCAGGTACCCTCCATTTCCCATTACG 178
|||||||||||| || |||||||||||||||| |||| ||||| |||||||||||||||
Sbjct 119 TCTCTTCCCAAGATCGTCACCATCCTCCACAGCTTCATGTACCTTCCATTTCCCATTACT 178
Query 179 CCTCCCTTCCAGAAACTTCAAAAAACCAATCGCCACCACCACca-t-c--ct--catcc- 231
||||||||||||||||||| |||||| |||| ||||||| ||| | | || || ||
Sbjct 179 ACTCCCTTCCAGAAACTTCAGAAAACCGATCGTCACCACCTCCACTACTACTACCA-CCA 237
Query 232 tcatcatcatcatcatcatcatcaccatcTTACTTTCCACTCTGTCCCAAGAACTTCACC 291
|| ||||||| |||||||| | | | |||||||||||||||||||||||||||||||||
Sbjct 238 CCACCATCATCCTCATCATCGTTATCTTCTTACTTTCCACTCTGTCCCAAGAACTTCACC 297
Query 292 AACTACTTGCCATGCCACGATCCATCAACAGCACGACAGTACAGCATTCAGAGACACTAT 351
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 298 AACTACTTGCCTTGCCACGATCCATCAACAGCACGACAGTACAGCATTGAGAGACACTAT 357
Query 352 CGGAGAGAGAGACACTGTCCTGACATAGCCCAAGAGAAGTTCAGGTGTTTGGTCCCAAAG 411
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 CGGAGAGAGAGGCACTGTCCTGACATAGCCCAAGAGAAGTTCAGGTGTTTGGTCCCAAAG 417
Query 412 CCCACTGGCTTCAAAACGCCTTTTCCATGGCCTGAGAGTAGAAAATATGCTTGGTTCAAG 471
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 418 CCCACTGGCTACAAAACGCCTTTTCCATGGCCTGAGAGTAGAAAATATGCTTGGTTTAGG 477
Query 472 AACGTACCATTCAAGAGGCTAGCTGAGTTGAAAAAGACTCAGAATTGGATTAGGCTTGAA 531
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 478 AACGTACCATTCAAGAGGCTAGCTGAGTTGAAAAAGACTCAGAATTGGGTTAGACTTGAA 537
Query 532 GGAGACCGTTTTGTTTTCCCTGGAGGCGGGACTTCCTTT-CCCGGTGGTGTGAAGGACTA 590
|||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||
Sbjct 538 GGAGACCGTTTTGTTTTCCCAGGAGGCGGGACTT-CTTTCCCCGGTGGTGTGAAGGACTA 596
Query 591 TGTTGATGTGATTCTGAGTGTTTTGCCTTTGGCTTCTGGGAGTATCAGGACTGTTCTCGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 TGTTGATGTGATTCTGAGTGTTTTGCCTTTGGCTTCTGGGAGTATCAGGACTGTTCTCGA 656
Query 651 TATTGGATGTGGAGTAGCGAGTTTTGGAGCCTTTTTGCTGAACTATAACATTTTGACAAT 710
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 657 TATTGGATGTGGAGTAGCGAGTTTTGGAGCCTTTTTGCTGAACTATAAGATTTTGACAAT 716
Query 711 GTCCATTGCACCGAGGGATATACACGAGGCTCAAGTTCAGTTCGCATTAGAACGTGGACT 770
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 717 GTCCATTGCACCGAGGGATATACATGAGGCTCAAGTTCAGTTCGCATTAGAACGTGGACT 776
Query 771 CCCTGCTATGCTCGGTGTTCTAAGCACTTATAAGTTGCCTTACCCGTCGAGGTCTTTCGA 830
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||
Sbjct 777 CCCTGCTATGCTCGGTGTTTTAAGCACTTATAAGCTGCCTTACCCGTCGAGGTCTTTTGA 836
Query 831 CATGGTCCACTGTTCTAGATGCCTGGTCAATTGGACTGCCTATGATGGGCTTTACTTGAT 890
||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 837 CATGGTCCATTGTTCTAGATGCCTTGTCAATTGGACTTCCTATGATGGGCTTTACTTGAT 896
Query 891 GGAGGTGGATCGTGTTCTACGTCCTGATGGATACTGGGTGTTGTCTGGACCACCTGTAGC 950
|||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 897 GGAGGTGGATCGTGTTTTACGTCCTGAGGGATACTGGGTGTTGTCTGGACCCCCTGTAGC 956
Query 951 ATCAAGTGTTAAATCCAAGAACCAGAAGAGAGATTCCAAGGAATTGCAGAACCAGATGGA 1010
|||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 957 ATCAAGGGTTAAATTTAAGAACCAGAAGAGAGATTCCAAGGAGTTGCAGAACCAGATGGA 1016
Query 1011 GCAACTAAATGATGTTTTTAGAAGACTTTGTTGGGAGAAGATTGCTGAAAGTTACCCAGT 1070
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1017 GAAACTAAATGATGTTTTTAGAAGACTTTGTTGGGAGAAGATTGCTGAAAGTTACCCGGT 1076
Query 1071 TGTCATCTGGAGAAAGCCTTCTAATCATTTGCAGTGTAG-ACAAAGACTACAAGCTCTTA 1129
||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||
Sbjct 1077 TGTCATCTGGAGAAAGCCTTCTAATCATTTGCAGTGTAGGA-AAAGACTAAAAGCTCTTA 1135
Query 1130 AGTTTCCTGGATTCTGCTCTTCTAGTGACCTTGAATCTGCGTGGTACAAAGAGATGGAGC 1189
||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||
Sbjct 1136 AGTTTCCTGGATTATGCTCTTCTAGTGACCCTGACGCTGCGTGGTATAAAGAGATGGAGC 1195
Query 1190 CGTGTATCACTCCTCTTCCAGATGTTAACGACACACACAAGATCGTTCTCAGAAACTGGC 1249
|||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||
Sbjct 1196 CGTGCATCACTCCTCTTCCAGATGTTAACGACACAAACAAGACCGTTCTCAAAAACTGGC 1255
Query 1250 CTGAGAGACTAAATAATGTGCCTCGACGAATCAAAACCGGGTTGATAAAGGGAACAACTA 1309
||||||||||||| ||||||||||| | | |||||||||| |||| ||||||||||||
Sbjct 1256 CTGAGAGACTAAACCATGTGCCTCGA--A-TGAAAACCGGGTCGATACAGGGAACAACTA 1312
Query 1310 TTGCCAGCTTCAAATCTAACAATAACATGTGGCAAAGAAGAGTATTGTACTATGACACCA 1369
||||| |||||||| || ||| ||| |||||||||||||||| ||||||||||||||||
Sbjct 1313 TTGCCGGCTTCAAAGCTGACACGAACCTGTGGCAAAGAAGAGTTTTGTACTATGACACCA 1372
Query 1370 AGTTAAAGTTTCTCAGCAATGGAAAATACAGAAACATCATTGATATGAACGCTGGATTAG 1429
|||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 1373 AGTTTAAGTTTCTCAGCAATGGAAAATACAGAAACGTCATTGATATGAACGCAGGATTAG 1432
Query 1430 GTGGTTTTGCTGCAGCTTTGAACAAATA-CACAATGTGGGTTATGAATGTGGTTCCGTTT 1488
||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| |||
Sbjct 1433 GTGGTTTTGCTGCAGCTTTGATCAAATATC-CAATGTGGGTTATGAATGTGGTTCCATTT 1491
Query 1489 GATCTTAAACCGAACACACTCGGTGTTGTGTATGATCGCGGTCTCATTGGAACTTACATG 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492 GATCTTAAACCGAACACACTCGGTGTTGTGTATGATCGCGGTCTCATTGGAACTTACATG 1551
Query 1549 AACTGGTGTGAAGCTTTCTCTACATACCCTCGAACCTATGATCTGATTCATGCCAATGGT 1608
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1552 AACTGGTGTGAAGCTTTATCTACATACCCTCGAACCTATGACCTGATTCATGCCAATGGT 1611
Query 1609 GTGTTCAGTTTGTACTTGGACAAATGTGACATTGTTGATATACTCTTGGAGATGCAGAGG 1668
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1612 GTATTCAGTTTGTACTTGGACAAATGTGACATTGTTGATATACTCTTGGAGATGCAGAGG 1671
Query 1669 ATTCTTAGACCAGAAGGCGCAGTTATAATACGAGACCGTTTAGATGTTCTTATCAAAGTG 1728
||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 1672 ATTCTTAGACCAGAAGGAGCAGTTATAATACGAGACCGTTTTGATGTTCTTGTCAAAGTG 1731
Query 1729 AAAGCTATAACCAGTCAAATGAGATGGAATGGGACAGTTTATCCAGACGATAACAGTGGT 1788
||||| ||||||| |||||||||||||||||||||| | |||||||| ||||| |||| |
Sbjct 1732 AAAGCCATAACCAATCAAATGAGATGGAATGGGACAATGTATCCAGAAGATAATAGTG-T 1790
Query 1789 TTT-GATCATGGAACAATACTAATTGTAGATAATTCAGTTAAATAA 1833
||| |||||||||||||||||||| |||||||| ||| ||||||||
Sbjct 1791 TTTCGATCATGGAACAATACTAATCGTAGATAACTCAATTAAATAA 1836
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90712384815
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5