BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483427 Length=1763 Score E Sequences producing significant alignments: (Bits) Value AT2G43210.1 | Symbols: | Ubiquitin-like superfamily protein | ... 2545 0.0 > AT2G43210.1 | Symbols: | Ubiquitin-like superfamily protein | chr2:17960711-17963727 FORWARD LENGTH=1854 Length=1854 Score = 2545 bits (1378), Expect = 0.0 Identities = 1648/1776 (93%), Gaps = 28/1776 (2%) Strand=Plus/Plus Query 12 GGTGGCGTTTAGTCGTTAATCGGCGTCTGATCTACCCGAAGCTTCTTCGTTCTTGAGCAG 71 ||||||||| ||||||||| | ||||||||||||| || ||||||||||||||| |||| Sbjct 1 GGTGGCGTTAAGTCGTTAA-CTGCGTCTGATCTACTCGTAGCTTCTTCGTTCTTCAGCAT 59 Query 72 TTGATC-G-G-A-T---C--------T-----ATGGAAGCTCTGTCTTCTCTTACGTTCA 111 |||||| | | | | | | |||||||||||||||||||||||||||| Sbjct 60 TTGATCGGAGTAGTGACCTTTTTGATTGACAGATGGAAGCTCTGTCTTCTCTTACGTTCA 119 Query 112 AGGGTTCTGTTCCGGAAGCCATATTTGAAGCCAAAGGGCAGAAGAAGCTTTTTGTTGTCT 171 |||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 120 AGGGTTCTCTTCCAGAAGCCATATTTGAAGCCAAAGGGAAGAAGAAGCTTTTTGTTGTCT 179 Query 172 ACATCTCTGGAGAGGATGAAGAGTCAGATAAGTTGAACAGATTGACTTGGACTGATGCAT 231 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 180 ACATTTCTGGAGAGGATGAAGAGTCGGATAAGTTGAACAGATTGACTTGGACTGATGCAT 239 Query 232 CGGTGGCAGAGTCGCTGTCGAAGTATTGTATTTTAGTGCATATTCAAGCTGGAAGTGTTG 291 |||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 240 CGGTGGCAGATTCGTTGTCGAAGTATTGTATTTTAGTGCATATCCAAGCTGGAAGTGTTG 299 Query 292 ACGCCACAAACTTCTCCGCAATATACCCATATTCATCTGTTCCTTGTATAGCTGCCATTG 351 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 ACGCCACAAACTTCTCTGCAATATACCCATATTCATCTGTTCCTTGTATAGCTGCCATTG 359 Query 352 GATTCAGTGGTACACAAGTTTGGAAAAATGAAGGATTTATCGCTGCTGAAGACATTGCAT 411 |||||||||||||||||||||||| || |||||||||||| ||||||||||| |||||| Sbjct 360 GATTCAGTGGTACACAAGTTTGGAGAACCGAAGGATTTATCACTGCTGAAGACCTTGCAT 419 Query 412 CCAGTTTAGAGAAGGCGTGGTTAGGACTTCATATCCAGGAAACAACTGCAAGTATCTTTT 471 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 CCAGTTTAGAGAAAGCGTGGTTAGGACTTCATATCCAGGAAACAACTGCAAGTATCTTTT 479 Query 472 CAGCAGCACTTGCATCACAGAACTCAGAGAAACCTGCTTCTAGTGCTTCAAATGTTGTCT 531 |||||||||||||||||||||||||||||| ||||| |||||||||||| | |||||||| Sbjct 480 CAGCAGCACTTGCATCACAGAACTCAGAGACACCTGTTTCTAGTGCTTCGAGTGTTGTCT 539 Query 532 TGCCTTCTGAAAGTGGTCCTTTAGATGCACCGGTTGCATCTCCATCGACGGCCTCTAGTG 591 ||||| | | ||||| ||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 540 TGCCTCCCGGAAGTGTTCCTTTAGATGCAGCGGTTGCATCTCCATCGACGGCTTCTAGTG 599 Query 592 TTCAACCCTCAGAGACAAAGTCAACGGTGACATCTGCATCAACAAAAGAAAACAATGATG 651 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 600 TTCAACCCTCAGAGACAAAGTCAACGGTAACATCTGCATCAACAACAGAAAACAATGATG 659 Query 652 GCACAGTTGCAGTTAAGGGCAAAGAATCTGCCGAACCTAGTAATTTGTGTGATACTACTA 711 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 660 GCACAGTTGCAGTTAAGGGCAAAGAATCTGCTGAACCCAGTAATTTGTGTGATACTACTA 719 Query 712 AAAACCAGCCAGCACCCTCTGTTGATGGAACTAAGGCCAATGTTGAACATGAAGCGACAG 771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 AAAACCAGCCAGCACCCTCTGTTGATGGAACTAAGGCCAATGTTGAACATGAAGCGACAG 779 Query 772 GGGCCCCTTCGCATGTTCAGGCAGAAAAGGAGCCAATTCGTCCTGCAGCCCCAGGAACAA 831 | |||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 780 AGACCCCTTTGCGTGTTCAGGCAGAAAAGGAGCCAATTCGTCCTACAGCCCCAGGAACAA 839 Query 832 ATGATAATGCATCCAGCGTTCGATCTTCTGTTGATAGTAAAAGGAAAAAAGGAACTGTGA 891 |||||||| ||||||| |||||||||||||||||||| ||||||||| | |||||||||| Sbjct 840 ATGATAATACATCCAGGGTTCGATCTTCTGTTGATAGAAAAAGGAAACAGGGAACTGTGA 899 Query 892 TAAACAAAGATGATAGTGGTCTAGGTGTTAGTGAAAGGGACATTAATTTAACAAAATCTG 951 |||| |||| ||||||||| |||||||||||| ||||||||||||| |||||||||||| Sbjct 900 TAAATGAAGAGGATAGTGGTGTAGGTGTTAGTGGAAGGGACATTAATCTAACAAAATCTG 959 Query 952 TTGGTACAGAAGAGGTCATGAAGCCAAAGGATGAAGGAGGAGAGGAAGAGGTTGGAGAAA 1011 | | |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 960 TCGATACAAAAGAGACCATGAAGCCAAAGGATGAAGGAGGAGAGGAAGAGGATGGAGAAA 1019 Query 1012 AATCC-AAAAAGTCATCTGATGTTCATTTAAACATTCGATTGCCTGATGGTAGTAGCCTT 1070 ||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1020 AATCCAAAAAAG-CATCTGACGTTCATTTAAACATTCGATTACCTGATGGTAGTAGCCTT 1078 Query 1071 CAGGAGAAGTTTTCTGTGACAAGTATATTGAGAATGGTCAAGGATTATGTGAACAGTAAT 1130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 CAGGAGAAGTTTTCTGTGACAAGTATATTGAGAATGGTCAAGGATTATGTGAACAGTAAT 1138 Query 1131 CAAACAATCGGACTGGGTGCTTATGATCTTGCGGTTCCTTACCCACGTAAGGTGTATAGT 1190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1139 CAAACAATCGGACTGGGTGCTTATGATCTTGCGGTTCCTTACCCACGTAAGGTGTATACT 1198 Query 1191 GACCAAGATATGGATAAGTCTCTATCGGAGTTGGGTTTGTTTGATAGACAAGCACTTGTA 1250 ||||||||| |||||||||||||||| |||||| | ||||| |||||||||||||||||| Sbjct 1199 GACCAAGATCTGGATAAGTCTCTATCCGAGTTGAGATTGTTCGATAGACAAGCACTTGTA 1258 Query 1251 GTGGTTCTGCGTAAAAGAGCAACCGTCTATCAAAGAGGACCATCTTACTCTGAGTCTAAC 1310 || |||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 1259 GTAGTTCCGCGAAAAAGAGCAACCGTCTATCAAAGAGGAACATCTTACTCGGAGTCTAAC 1318 Query 1311 AACAACACAGACCCTAAT-GATGGTGGTTACTTTGCTTATGTTAGAAGAGTACTGTCTTA 1369 |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| Sbjct 1319 AACAACACAGACCCTAATAG-TGGCGGTTACTTTGCTTATGTTAGAAGAGTACTGTCTTA 1377 Query 1370 TGCAAACCCGTTTTCATATTTTGGCGGCGGTACTGCCAACACATCAAGCTCTGGTCCAGA 1429 ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| Sbjct 1378 TGCAAACCCGTTTTCATATTTTGGCGGTGGTACTGCCAACGCATCAAGCTCTGTTCCAGA 1437 Query 1430 GCCTCAAAGTGGACCACAGGCGGAGCTGAGAAACAATCTGGGGCAAGG-GGGCTCCTCCT 1488 | ||||| ||||| | ||||| ||||||||||||||||||||| ||| | |||| Sbjct 1438 ACGTCAAACAAGACCAAATACGGAGGTGAGAAACAATCTGGGGCAAGTAGGGA-CGTCCT 1496 Query 1489 TTCAAGATTCATCAGAAGGTAGGAGCAATGTTAGGAATAGGAGACCAACCACTTCTCGGA 1548 |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1497 TTCAAGATCCATCAGAAGGTAGGAGCAACGTTAGGAATAGGAGACCAACCACTTCTCGGA 1556 Query 1549 TTGGAAGTAACATCCATACGCTGAATCATACTGAAGATGACGCTCCGTTTGGTGATGGAA 1608 |||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||| Sbjct 1557 TTGGAAGTAACATCCATACGTTGAATCACAATGAAGATGAGGCTCCGTTTGGTGATGGAA 1616 Query 1609 ACGCCTTTTGGAACGGAAACTCCACACAGTACGGTGGTGGAAGCGGTGGAGACAGTAATG 1668 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1617 ACGCTTTTTGGAACGGAAACTCCACACAGTACGGTGGTGGAAGCGGTGGAGACAGTAATG 1676 Query 1669 ATAGGCGATGAAATGAGAGAACTTGAAATCTGTGTGGATAGATACAGAAACAGCTCTGA- 1727 |||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| | Sbjct 1677 ATAGACGATGAAATAAGAGAAGTTGAAATCTGTGTGGATAGATACAGAAACAGCTCGGGT 1736 Query 1728 GTTTACTTGTTATACTTTACTCTTTATGAACCATTT 1763 |||||||| |||||||| |||||||||||||||||| Sbjct 1737 GTTTACTTTTTATACTTGACTCTTTATGAACCATTT 1772 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87198346665 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5