BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483526 Length=1035 Score E Sequences producing significant alignments: (Bits) Value AT5G38640.1 | Symbols: | NagB/RpiA/CoA transferase-like superf... 1504 0.0 AT2G44070.1 | Symbols: | NagB/RpiA/CoA transferase-like superf... 1458 0.0 > AT5G38640.1 | Symbols: | NagB/RpiA/CoA transferase-like superfamily protein | chr5:15467679-15470724 REVERSE LENGTH=2320 Length=2320 Score = 1504 bits (814), Expect = 0.0 Identities = 935/993 (94%), Gaps = 10/993 (1%) Strand=Plus/Plus Query 1 CTTGACCCTATGCATCCTGCTGTGTACAAGGTTGGTCTTCAATATCTTTCTGGGGATATT 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 990 CTTGACCCTATGCATCCTGCTGTGTACAAGGTTGGTCTTCAATATCTTTCTGGGGATATC 1049 Query 61 TCTGGTGGCAATGCCAGGTGTATTGCGATGCTCCAGGCATTCCAAGAGGTTGTCAAAGAT 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1050 TCTGGTGGCAATGCCAGGTGTATTGCGATGCTCCAAGCATTCCAAGAGGTTGTCAAAGAT 1109 Query 121 TATTCTACACCGCCTGAGAAGACTCTTAACAGGAACATGGCTGCGAAAATAAGTAGCTAC 180 ||||| ||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct 1110 TATTCAACACCGCCTGAGAAGTCTCTTAACAGGGACATGACTGCGAAAATAAGTAGCTAC 1169 Query 181 GTCTCTTTTCTCAGAGATTGTCGTCCGCTTTCGGTTAGCATGGAAAACGCAATCCGGTTT 240 ||||| || |||| ||| || |||||||||||| ||||||||| ||||||||| || ||| Sbjct 1170 GTCTCCTTCCTCATAGAATGCCGTCCGCTTTCGATTAGCATGGGAAACGCAATACGATTT 1229 Query 241 GTGAAAAACAGGATTGCAAAGCTGCCTATAACACTTTCTGAATCTGAAGCAAAAGCTGCT 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1230 GTGAAAAACAGGATTGCAAAGCTGCCTATAACACTTTCTGAATCTGAAGCAAAAGCTACT 1289 Query 301 CTTAAGTCAGATATCGCACGGTTCATCAACGAGAAAATCATAGGGGCAGATACGGTGATA 360 ||| |||||||||| | ||||||||| |||||||| ||||||| |||||||||||||||| Sbjct 1290 CTTCAGTCAGATATTGAACGGTTCATTAACGAGAAGATCATAGTGGCAGATACGGTGATA 1349 Query 361 GTCAAACATGCTGTCACTAAGATAAGAGACGGTGATGTCCTTCTGACCTACGGATCTCCC 420 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1350 GTCAAACATGCTGTTACTAAAATAAGAGACGGTGATGTCCTTCTGACCTACGGATCTCCC 1409 Query 421 ACTGCTGTTGAGATGGTATTATTACATGCACATGAACTCAGGAAAAAGTTTCGTGTCTTG 480 |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 1410 ACTGCTGTTGAGATGGTAATATTACATGCACATGAACTCAGGAAAAAGTTTCGAGTCTTG 1469 Query 481 GTGGTGGATTCTCGCCCAAAGCTTCAAGGGCAGCTACTGCTTCGTAGATTGATCAAACGA 540 |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1470 GTGGTGGATTCTCGTCCAAAGCTTGAAGGGCAGCTACTGCTTCGTAGATTGATCAAACGA 1529 Query 541 GGCATTAACTGTGCATACACTCATATAAATGCCATTTCATATATCATGCACCAAGTCACC 600 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1530 GGCATTAACTGTACATACACTCATATAAATGCCATTTCATATATCATGCATGAAGTCACC 1589 Query 601 AAAGTGTTTTTGGGCGCCTCATCAGTTTTCTCTAACGGAACAGTTTACTCTAGGGTTGGG 660 |||||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||| Sbjct 1590 AAAGTGTTTTTGGGCGCCTCGTCAGTTTTGTCTAACGGAACAGTTTATTCAAGGGTTGGG 1649 Query 661 ACTGCTTGTGTTGCAATGGTGGCAACTGCTTTCCGTGTTCCTGTGCTTGTTTGTTGCGAA 720 |||||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||||| Sbjct 1650 ACTGCTTGTGTTGCAATGGTTGCAAATGCATTCCGTGTTCCTGTGCTTGTATGTTGCGAA 1709 Query 721 GCCTACAAGTTCCATGAGAGGGTACTATTGGATTATTCAATATGCTCGTCCAATGAGCTC 780 ||||||||||||||||||||||| | ||||| |||||||||| | ||||||||||| Sbjct 1710 GCCTACAAGTTCCATGAGAGGGTGCAATTGG---ATTCAATATG-T--TCCAATGAGCTT 1763 Query 781 GGTGATCCAAATGCTATTTCAAAAGTTCATGGAAGAGAAGACATAAACTACTTT-GATGG 839 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| Sbjct 1764 GGTGATCCAAATGCTATTTCAGAAGTTCATGGAAGAGAAGACATAAACTA-TTTAGATGG 1822 Query 840 CTTGACCAACAATGCAAACCTAAAGTTTTTGAACTTGATGTATGATGCTACACCTTCAGA 899 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1823 CTTGACCAACAACGCAAACCTGCAGTTTTTGAACTTGATGTATGATGCTACACCTTCAGA 1882 Query 900 TTACATTTCCATGATAATCACAGATTATGGCATGGTACCTCCCACAAGCGTGCCTGTCAT 959 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1883 TTACATTTCCATGATAATCACAGATTATGGCATGGTACCTCCCACAAGTGTGCCTGTCAT 1942 Query 960 CGTGAGAGAATGTCAGAAAGAACACAATTGCTT 992 ||||||||||| ||||||||||||| |||||| Sbjct 1943 CGTGAGAGAATATCAGAAAGAACAC--TTGCTT 1973 > AT2G44070.1 | Symbols: | NagB/RpiA/CoA transferase-like superfamily protein | chr2:18231047-18232493 REVERSE LENGTH=1076 Length=1076 Score = 1458 bits (789), Expect = 0.0 Identities = 948/1024 (93%), Gaps = 14/1024 (1%) Strand=Plus/Plus Query 1 CTTGACCCTATGCATCCTGCTGTGTACAAGGTTGGTCTTCAATATCTTTCTGGGGATATT 60 ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 16 CTTGACCCTATGCATTCTGCTGTGTACAAGGTTGGTCTTCATTATCTTTCTTGGGATATT 75 Query 61 TCTGGTGGCAATGCCAGGTGTATTGCGATGCTCCAGGCATTCCAAGAGGTTGTCAAAGAT 120 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||| Sbjct 76 TCTGGTGGCAATGCCAGATGTATTGCGATGCTCCAAGCATTCCAAGAGGTTGTTAAAGAT 135 Query 121 TATTCTACACCGCCTGAGAAGACTCTTAACAGGA-ACATGGCTGCGAAAATAAGTAGCTA 179 || || || ||||||||||| || ||||| | || ||||| |||| ||||||||||||| Sbjct 136 TACTCGACGCCGCCTGAGAATACCCTTAATA-GAGACATGACTGCTCAAATAAGTAGCTA 194 Query 180 CGTCTCTTTTCTCAGAGATTGTCGTCCGCTTTCGGTTAGCATGGAAAACGCAATCCGGTT 239 ||||||||| |||| ||| || |||||||||||| ||||||||| |||||||||||| || Sbjct 195 CGTCTCTTTCCTCATAGAATGCCGTCCGCTTTCGATTAGCATGGGAAACGCAATCCGATT 254 Query 240 TGTGAAAAACAGGATTGCAAAGCTGCCTATAACACTTTCTGAATCTGAAGCAAAAGCTGC 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 255 TGTGAAAAACAGGATTGCAAAGCTGCCTATAACACTTTCTGAATCTGAAGCAAAAGCTTC 314 Query 300 TCTTAAGTCAGATATCGCACGGTTCATCAACGAGAAAATCATAGGGGCAGATACGGTGAT 359 |||| | |||||||| | ||| ||||| ||||||||||||||||| |||||||| ||||| Sbjct 315 TCTTCACTCAGATATTGAACGTTTCATTAACGAGAAAATCATAGGTGCAGATACAGTGAT 374 Query 360 AGTCAAACATGCTGTCACTAAGATAAGAGACGGTGATGTCCTTCTGACCTACGGATCTCC 419 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 375 AGTCGAACATGCTGTCACTAAAATAAGAGACGGTGATGTCCTTCTGACCTACGGATCTTC 434 Query 420 CACTGCT-GTTGAGATGGTATTATTACATGCACATGAACTCAGGAAAAAGTTTCGTGTCT 478 ||||| | |||||||| ||||| | ||||||||||||||| |||||||||||||||||| Sbjct 435 CACTG-TCATTGAGATGATATTAGTGCATGCACATGAACTCGGGAAAAAGTTTCGTGTCT 493 Query 479 TGGTGGTGGATTCTCGCCCAAAGCTTCAAGGGCAGCTACTGCTTCGTAGATTGATCAAAC 538 | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 494 TTGTGGTGGATTCTCGACCAAAGCTTCAAGGGAAGCTACTGCTTCGTAGATTGATCAAAC 553 Query 539 GAGGCATTAACTGTGCATACACTCATATAAATGCCATTTCATATATCATGCACCAAGTCA 598 |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 554 GAGGCATTAACTGTACATACACTCATATAACTGCCATATCATATATCATGCACCAAGTCA 613 Query 599 CCAAAGTGTTTTTGGGCGCCTCATCAGTTTTCTCTAACGGAACAGTTTACTCTAGGGTTG 658 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 614 CCAAAGTGTTTTTGGGCGCCTCATCAGTTTTTTCTAACGGAACAGTTTACTCAAGGGTTG 673 Query 659 GGACTGCTTGTGTTGCAATGGTGGC-AACTGCTTTCCGTGTTCCTGTGCTTGTTTGTTGC 717 | ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 674 GCACTGCTTGTGTTGCAATGGTGGCTAA-TGCTTTCCGTGTTCCTGTGCTTGTTTGTTGC 732 Query 718 GAAGCCTACAAGTTCCATGAGAGGGTACTA-TTGGATTATTCAATATGCTCGTCCAATGA 776 |||||||| ||||||||||||| ||| | | ||||||||||||||||| | |||||||| Sbjct 733 GAAGCCTATAAGTTCCATGAGAAGGTGC-AGTTGGATTATTCAATATG--C-TCCAATGA 788 Query 777 GCTCGGTGATCCAAATGCTATTTCAAAAGTTCATGGAAGAGAAGACATAAACTACTTTGA 836 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 789 GCTCGGTGATCCAAATGCTATTTCAAAAGTTCATGGAAGAGAAGACATAAACTACTTAAA 848 Query 837 TGGCTTGACCAACAATGCAAACCTAAAGTTTTTGAACTTGATGTATGATGCTACACCTTC 896 ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||| Sbjct 849 TGGCTTGACCAACAATGCAAAGCTGAAGTTTCTGAACTTGATGTATGATGCTACACCTTC 908 Query 897 AGATTACATTTCCATGATAATCACAGATTATGGCATGGTACCTCCCACAAGCGTGCCTGT 956 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 909 AGATTACATTTCCATGATAATCACAGATTATGGCATGGTACCTCCCACAAGTGTGCCTGT 968 Query 957 CATCGTGAGAGAATGTCAGAAAGAACACAATTGCTTTGAAAGCCCAAAAATTGTTATTTA 1016 |||||| ||||||| ||||||||||||| |||||| ||||| |||| ||||||||||| Sbjct 969 CATCGTAAGAGAATATCAGAAAGAACAC--TTGCTTC-AAAGCTCAAAGATTGTTATTTA 1025 Query 1017 GATG 1020 |||| Sbjct 1026 GATG 1029 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50736488470 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5