BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483538
Length=1465
Score E
Sequences producing significant alignments: (Bits) Value
AT2G44150.1 | Symbols: ASHH3, SDG7 | histone-lysine N-methyltra... 2122 0.0
AT3G59960.1 | Symbols: ASHH4, SDG24 | histone-lysine N-methyltr... 579 3e-164
> AT2G44150.1 | Symbols: ASHH3, SDG7 | histone-lysine N-methyltransferase
ASHH3 | chr2:18258610-18261442 FORWARD LENGTH=1695
Length=1695
Score = 2122 bits (1149), Expect = 0.0
Identities = 1328/1413 (94%), Gaps = 18/1413 (1%)
Strand=Plus/Plus
Query 1 GCAACTGCCGCTCTTTCTTTCCTTCTTACTGCCTCAGATCTGCCATTGTTActtcttctt 60
||||||||||||||||| ||| ||||||||| |||||||| |||||||||| ||||||
Sbjct 2 GCAACTGCCGCTCTTTC-TTCTTTCTTACTGTCTCAGATCCGCCATTGTTA---CTTCTT 57
Query 61 cttcttcttcttcttcAACGACAACAAGAAGTAACAGAATTAGGGTTTAGAAAGTTCGTA 120
| ||||||||||||||| |||||||||||| | | |||||||||| ||||| |||| |
Sbjct 58 C-AGTTCTTCTTCTTCAACAACAACAAGAAGT-A-ATAATTAGGGTTGAGAAACTTCGAA 114
Query 121 TTCCGAAACAACAGTTAGACGTACTAGTTTTA-CTCATCtttttttC-TAATTTCATCGA 178
|||||||||||||| |||||||||||||||| | |||||| ||||| || |||||||||
Sbjct 115 TTCCGAAACAACAGAGAGACGTACTAGTTTTAGC-CATCTTCTTTTCTTAGTTTCATCGA 173
Query 179 ACTTGGTGTTACCTCTATAGGTTGAAGTTCAAATCTTGCTTATTCTCTGATTTTTAGAGC 238
||||||||||||||| |||||| || | ||||||||||||||||||||| ||||||||||
Sbjct 174 ACTTGGTGTTACCTCAATAGGTCGACGCTCAAATCTTGCTTATTCTCTGGTTTTTAGAGC 233
Query 239 TTCTTATT-GATTCTGTCGCCATGCCAGCCACCAAGAAGATTTCGGACCGGAATCACTTA 297
||||| || |||||| ||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct 234 TTCTT-TTAGATTCTTTCGACATGCCAGCCAGCAAAAAGATTTCGGACCGGAATCACTTA 292
Query 298 GGGCAAGTGTTCAACAAGCTACTGAATCAGATTGGAGAATCTGAAGAATTTGAGTTACCG 357
|||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 293 GGGCAAGTGTTCGACAAGCTATTGAATCAGATTGGAGAATCTGAAGAATTCGAGTTACCG 352
Query 358 GATTGGTTGAATAAAGGAAAACCTACTCCTTATATCTTCATCAGGCGCAATATATACTTG 417
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 353 GAGTGGTTGAATAAAGGAAAACCTACTCCTTATATCTTCATCAGGCGCAATATATACTTG 412
Query 418 ACGAAGAAAGTCAAAAGGAGGGTTGAAGATGATGGAATCTTCTGTTCTTGCTCTTCCTCG 477
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 413 ACGAAGAAAGTCAAAAGGAGGGTTGAAGATGATGGAATCTTCTGTTCTTGCTCCTCCTCG 472
Query 478 TCTCCTGGTTCTTCTTCAACTGTGTGTGGAAGTAATTGCCATTGTGGGATGCTATTCTCA 537
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 473 TCTCCTGGTTCTTCTTCAACTGTCTGTGGGAGTAATTGCCATTGTGGGATGCTATTCTCA 532
Query 538 AGCTGTTCCTCAAGTTGCAAGTGTGGGAGTGAGTGTAACAATAAGCCGTTCCAACAACGG 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 533 AGCTGTTCCTCAAGTTGCAAGTGTGGGAGTGAGTGTAACAATAAGCCGTTCCAACAACGA 592
Query 598 CATGTCAAGAAGATGAAGTTAATTCAGACAGAAAAATGCGGATCAGGGATTGTGGCAGAA 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CATGTCAAGAAGATGAAGTTAATTCAGACAGAAAAATGCGGATCAGGGATTGTGGCAGAA 652
Query 658 GAAGAAATCAAACCAGGAGAGTTTATCATTGAATATGTCGGAGAAGTTATTGATGATAAG 717
||||||||| || | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 653 GAAGAAATCGAAGCTGGAGAGTTTATCATTGAATATGTTGGAGAAGTTATTGATGATAAG 712
Query 718 ACTTGTGAAGAGAGGCTTTGGAAGATGAAACACCGTGGCGAGACAAACTTTTATTTATGT 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 713 ACTTGTGAAGAGAGGCTTTGGAAGATGAAACACCGTGGCGAGACAAACTTTTATTTATGT 772
Query 778 GAGATAACCAGAGATATGGTGATTGATGCTACTCATAAGGGAAACAAATCAAGATATATT 837
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 773 GAGATAACCAGAGATATGGTTATTGATGCTACTCATAAGGGAAACAAATCAAGATATATT 832
Query 838 AATCATAGCTGCAACCCGAATACACAGATGCAGAAATGGATAATTGACGGCGAGACCAGA 897
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 833 AATCATAGCTGCAACCCTAATACGCAGATGCAGAAATGGATAATTGACGGCGAGACCAGA 892
Query 898 ATTGGCATTTTCGCCACACGTGGCATTAAAAAGGGAGAGCATTTGACCTATGATTATCAG 957
|| |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct 893 ATCGGCATTTTCGCCACCCGTGGTATCAAAAAGGGAGAGCATTTGACCTATGATTATCAG 952
Query 958 TTTGTTCAGTTTGGTGCAGATCAAGACTGCCATTGTGGGGCTGTAGGTTGCAGAAGGAAG 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 TTTGTTCAGTTTGGTGCAGATCAAGACTGCCATTGTGGGGCTGTAGGTTGCAGAAGGAAG 1012
Query 1018 CTTGGTGTAAAACCTAGTAAACCTAAGTTAGCCTCGGATGAATCTTTTAATCTAGTGGCA 1077
||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1013 CTTGGTGTAAAACCTAGCAAACCTAAGATAGCCTCGGATGAAGCTTTTAATCTAGTGGCA 1072
Query 1078 CATGAAGTGGCCCAGACAATGCCCAAGGTGCATCAAAATGGACATATACATA-ATCACGT 1136
|||||| ||||||||||| |||||||||||||||||||||||| | || ||| | ||| |
Sbjct 1073 CATGAATTGGCCCAGACACTGCCCAAGGTGCATCAAAATGGACTTGTAAATAGA-CACAT 1131
Query 1137 TTCTCCAGGGATATCATGGAACAACCTTAGTCAAAGGGAAACATGTTCGCGTAATTGCAT 1196
| |||| | |||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1132 AGATGCAGGAAAATCATGGAACAATCTTAGTCAAAGGGATACATGTTCGCGTAATTGCAT 1191
Query 1197 TGGTGTGGTGATCAGGTTATCTCGCCCCACTAGTGATAGGTGTTTTGGCCTAGTTAGACA 1256
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1192 TGGTGTGGTGATCAGGTTATCTCGCCCCACGAGTGATAGGTGTTTTGGCCTCGTTAGACA 1251
Query 1257 TTTTGATGAGTATTCAAGAAAGCACTCGGTGATGTTCGAGGATGGTGTTACCGAGTTTGT 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 TTTTGATGAGTATTCAAGAAAGCACTCGGTGATGTTCGAGGATGGTGTTACCGAGTTTGT 1311
Query 1317 CGACATGTCGAGAGAAGACTGGGAGATTGTCTAATATTGTTTTCAGCTTGCTGCCATGAA 1376
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1312 CGACATGTCGAGAGAAGACTGGGAGATTGTCTAATATTGTTTTCAGATTGCTT---TGAA 1368
Query 1377 GTTGAGAAACCTTGAATTATCTGTCTTGGTAAA 1409
||||||||||| ||| | |||||||||||||
Sbjct 1369 GTTGAGAAACCAA-AATAACCTGTCTTGGTAAA 1400
> AT3G59960.1 | Symbols: ASHH4, SDG24 | histone-lysine N-methyltransferase
ASHH4 | chr3:22148334-22150386 FORWARD LENGTH=1059
Length=1059
Score = 579 bits (313), Expect = 3e-164
Identities = 551/664 (83%), Gaps = 24/664 (4%)
Strand=Plus/Plus
Query 390 TATCTTCATCAGGCGCAATATATACTTGACGAAGAAAGTCAA-AAGGAGGGTTGAA-GAT 447
||||||||||| ||||||||||||||||| ||||||| |||| || || ||| || |||
Sbjct 123 TATCTTCATCAAGCGCAATATATACTTGAAGAAGAAACTCAAGAA-GAAAGTT-AAGGAT 180
Query 448 GATGGAATCTTCTGTTCTTGCTCTTCCTCGTCTCCTGGTTCTTCTTCAACTGTGTGTGGA 507
|||| || ||||||||||| | |||| | |||||| |||||||||| | |||||
Sbjct 181 CATGGCATATTCTGTTCTTG--C-TCCTTGGATCCTGG---TTCTTCAACTCTTTGTGGC 234
Query 508 AGTAATTGCCATTGTGGGATGCTATTCTCAAGCTGTTCCTCAAGTTGCAAGTGTGGGAGT 567
|| ||||| |||||||||| ||| ||||||||||||| || |||||||| || | |||
Sbjct 235 AGCGATTGCAATTGTGGGATTCTACTCTCAAGCTGTTCGTCTAGTTGCAAATGCAGTAGT 294
Query 568 GAGTGTAACAATAAGCCGTTCCAACAACGGCATGTCAAGAAGATGAAGTTAATTCAGACA 627
|| || | ||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct 295 GAATGCACCAACAAGCCGTTCCAACAACGACATATCAAGAAGATGAAGTTAGTTCAGACA 354
Query 628 GAAAAATGCGGATCA-GGGATTGTGGCAGAAGAAGAAATCAAAC-CAGGAGAGTTTATCA 685
|| ||||| |||| | |||||||| ||||| ||||| ||| ||| |||||||||||||||
Sbjct 355 GAGAAATGTGGAT-ATGGGATTGTAGCAGATGAAGATATC-AACTCAGGAGAGTTTATCA 412
Query 686 TTGAATATGTCGGAGAAGTTATTGATGATAAGACTTGTGAAGAGAGGCTTTGGAAGATGA 745
|||||||||| |||||||||||||| || |||| ||||||||| |||||||||||| |||
Sbjct 413 TTGAATATGTGGGAGAAGTTATTGACGACAAGATTTGTGAAGAAAGGCTTTGGAAGCTGA 472
Query 746 AACACCGTGG-CGAGACAAACTTT-TATTTATGTGAGAT-AACCAGAGATATGGTGATTG 802
| || || ||||||||| ||| ||||| ||| |||| ||| || | ||||||||||
Sbjct 473 ATCA-TAAGGTCGAGACAAA-TTTCTATTTGTGTCAGATAAACTGGA-ACATGGTGATTG 529
Query 803 ATGCTACTCATAAGGGAAACAAATCAAGATATATTAATCATAGCTGCAACCCGAATACAC 862
|||||||||| ||||| || ||||||||||| || ||||| ||||||| || || |||
Sbjct 530 ATGCTACTCACAAGGGTAATAAATCAAGATACATCAATCACAGCTGCAGTCCTAACACAG 589
Query 863 AGATGCAGAAATGGATAATTGACGGCGAGACCAGAATTGGCATTTTCGCCACACGTGGCA 922
|||||||||||||||||||||| |||||||| ||||| |||||||| || || ||| ||
Sbjct 590 AGATGCAGAAATGGATAATTGATGGCGAGACAAGAATCGGCATTTTTGCTACCCGTTTCA 649
Query 923 TTAAA-AAGGGAGAGCATTTGACCTATGATTATCAGTTTGTTCAGTTTGGTGCAGATCAA 981
|||| || || ||||| ||||| || ||||| |||||||||||||||||||||||||||
Sbjct 650 -TAAACAAAGGCGAGCAGTTGACTTACGATTACCAGTTTGTTCAGTTTGGTGCAGATCAA 708
Query 982 GACTGCCATTGTGGGGCTGTAG-GTTGCAGAAGGAAGCTTGGTGTAAAACCTAGTAAACC 1040
|| ||| | ||||| || || | ||||||||| ||||| |||| ||||||| | ||| |
Sbjct 709 GATTGCTACTGTGGTGCAGT-GTGTTGCAGAAAAAAGCTAGGTGCAAAACCTTGCAAAAC 767
Query 1041 TAAG 1044
||||
Sbjct 768 TAAG 771
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72238584255
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5