BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483539
Length=1953
Score E
Sequences producing significant alignments: (Bits) Value
AT2G44160.1 | Symbols: MTHFR2 | methylenetetrahydrofolate reduc... 3341 0.0
AT3G59970.3 | Symbols: MTHFR1 | methylenetetrahydrofolate reduc... 1906 0.0
AT3G59980.1 | Symbols: | Nucleic acid-binding, OB-fold-like pr... 102 1e-20
> AT2G44160.1 | Symbols: MTHFR2 | methylenetetrahydrofolate reductase
2 | chr2:18262210-18265346 FORWARD LENGTH=2037
Length=2037
Score = 3341 bits (1809), Expect = 0.0
Identities = 1907/1955 (98%), Gaps = 4/1955 (0%)
Strand=Plus/Plus
Query 1 TTCTTCTCCATTTCGAAAAGAAGATGAAGGTGATAGATAAGATCCAGTCATTGGCCGACG 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 69 TTCTTCTCCATTTCGAAAAGAAGATGAAGGTGATAGATAAGATCCAGTCATTAGCCGACG 128
Query 61 AAGGCAAAACAGCGTTTTCCTTCGAATTCTTCCCACCAAAAACAGAAGATGGAGTCGACA 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 129 AAGGCAAAACAGCGTTTTCCTTCGAATTCTTCCCACCAAAGACAGAAGATGGAGTCGACA 188
Query 121 ATCTCTTTGAGAGAATGGATCGAATGGTGGCTTATGGTCCAACGTTTTGCGATATCACAT 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 189 ATCTCTTTGAGAGAATGGATCGAATGGTTGCTTATGGTCCAACGTTTTGCGATATCACTT 248
Query 181 GGGGAGCTGGTGGATCTACCGCAGATCTAACGCTTGATATAGCTTCGAGGATGCAAAACG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249 GGGGAGCTGGTGGATCTACCGCAGATCTAACGCTTGATATAGCTTCGAGGATGCAAAACG 308
Query 241 TTGTTTGTGTTGAGAGTATGATGCATCTTACATGTACTAACATGCCTGTTGAGAAGATTG 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 309 TTGTTTGTGTTGAGAGTATGATGCATCTTACGTGTACTAACATGCCTGTTGAGAAGATTG 368
Query 301 ATCATGCTCTTGAGACCATTAGATCTAATGGTATTCAGAATGTGCTTGCTCTTAGAGGTG 360
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 369 ATCATGCTCTTGAGACTATTAGATCTAATGGGATTCAGAATGTGCTTGCTCTTAGAGGTG 428
Query 361 ATCCTCCTCATGGTCAAGATAAGTTTGTTCAGGTTGAAGGTGGTTTTGATTGTGCTTTGG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 429 ATCCTCCTCATGGTCAAGATAAGTTTGTTCAGGTTGAAGGTGGTTTTGATTGTGCTTTGG 488
Query 421 ATCTCGTTAATCACATTCGAAGCAAGTATGGTGATTACTTTGGTATCACTGTTGCTGGTT 480
|||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 489 ATCTTGTTAATCACATTCGTAGCAAGTATGGTGATTACTTTGGTATCACTGTCGCTGGTT 548
Query 481 ATCCTGAGGCTCATCCTGATGTTATTGGTGAGAATGGTCTTGCGTCTAATGAAGCTTATC 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 ATCCTGAGGCGCATCCTGATGTTATTGGTGAGAATGGTCTTGCGTCTAATGAAGCTTATC 608
Query 541 AGAGTGATCTTGAGTATCTCAAGAAAAAGATTGATGCTGGAGCTGATCTGATTGTTACTC 600
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 609 AGAGTGATCTTGAGTATCTGAAGAAAAAGATTGATGCTGGAGCTGATCTGATTGTTACTC 668
Query 601 AGCTTTTCTATGATACTGATATATTCCTCAAGTTTGTGAATGATTGTCGGCAAATTGGGA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 AGCTTTTCTATGATACTGATATATTCCTCAAGTTTGTGAATGATTGTCGGCAAATTGGGA 728
Query 661 TTAATTGTCCCATTGTTCCTGGAATTATGCCTATTAATAACTACAGAGGGTTCTTGCGTA 720
||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 729 TTAGTTGTCCCATTGTTCCTGGAATTATGCCTATTAATAACTACAGAGGCTTTTTGCGTA 788
Query 721 TGACTGGTTTCTGCAAGACTAAGATACCAGTTGAGGTCATGGCGGCCTTGGAGCCTATCA 780
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 789 TGACTGGTTTCTGCAAGACTAAGATACCAGTTGAGGTGATGGCTGCCTTGGAGCCTATCA 848
Query 781 AGGATAATGAAGAAGCTGTGAAAGCCTATGGTATTCACCTTGGAACAGAGATGTGTAAAA 840
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 849 AGGATAACGAAGAAGCTGTGAAAGCCTATGGTATTCACCTTGGAACAGAGATGTGTAAAA 908
Query 841 AGATGTTGGCTCATGGAGTCAAGTCTCTTCATCTCTACACATTGAACATGGAGAAATCAG 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 909 AGATGTTGGCTCATGGAGTCAAGTCTCTTCATCTCTACACATTGAACATGGAGAAATCTG 968
Query 901 CTCTTGCAATATTGATGAATCTTGGTATGATTGACGAGTCCAAAATTTCTCGTTCTTTAC 960
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 969 CTCTTGCAATATTGATGAATCTTGGTATGATTGATGAGTCCAAAATTTCTCGTTCTTTAC 1028
Query 961 CATGGAGACGCCCTGCAAATGTTTTCCGTAATAAGGAAGATGTGCGCCCCATTTTCTGGG 1020
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1029 CCTGGAGACGCCCTGCAAATGTTTTCCGTACTAAGGAAGATGTGCGCCCCATTTTCTGGG 1088
Query 1021 CAAACCGTCCAAAGAGCTACATTTCTAGAACCAAGGGCTGGGAAGACTTCCCACAAGGCC 1080
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1089 CAAACCGTCCAAAGAGCTACATTTCTAGAACCAAGGGCTGGGAAGATTTCCCACAAGGCC 1148
Query 1081 GGTGGGGTGATTCACGCAGTGCTTCATATGGTGCACTCTCGGATCATCAGTTCTCACGTC 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 GGTGGGGTGATTCACGCAGTGCTTCATATGGTGCACTCTCGGATCATCAGTTCTCACGTC 1208
Query 1141 CACGAGCACGAGACAAGAAGCTTGAACAAGAATGGGTTGTCCCACTGAAAAGTGTTGAAG 1200
| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1209 CGCGAGCACGTGACAAGAAGCTTCAACAAGAATGGGTTGTCCCACTGAAAAGTGTTGAAG 1268
Query 1201 ATATTCAGGAGAAATTCAAGGAGCTCTGCCTTGGAAACCTTAAAAGCAGTCCCTGGTCTG 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 ATATTCAGGAGAAATTCAAGGAGCTCTGCCTTGGAAACCTTAAAAGCAGTCCCTGGTCTG 1328
Query 1261 AATTAGATGGACTCCAGCCAGAGACAAAGATAATAAACGAGCAACTGGTAAAAATCAACT 1320
||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||
Sbjct 1329 AATTAGATGGACTCCAGCCAGAGACAAGGATAATAAACGAGCAACTGATAAAAGTCAACT 1388
Query 1321 CCAAAGGCTTCTTGACCATCAATAGCCAACCATCAGTCAACGCCGAGAGATCTGATTCCC 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 CCAAAGGCTTCTTGACCATCAATAGCCAACCATCAGTCAACGCCGAGAGATCTGATTCCC 1448
Query 1381 CAACTGTTGGATGGGGAGGTCCTGTTGGATATGTATACCAAAAGGCTTATCTAGAGTTCT 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1449 CAACTGTTGGATGGGGAGGTCCTGTTGGATATGTATACCAAAAGGCTTATCTAGAGTTCT 1508
Query 1441 TCTGCTCAAAGGAGAAATTAGATGCAGTGGTCGAGAAATGCAAAGCTTTGCCATCGATTA 1500
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1509 TCTGCTCAAAGGAGAAATTAGATGCAGTGGTGGAGAAATGCAAAGCTTTGCCATCGATTA 1568
Query 1501 CTTACATGTCTGTGAACAAAGGAGAAAACTGGGTATCGAACACTGCCCAAGCTGATGTGA 1560
|||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1569 CTTACATGGCTGTGAACAAAGGAGAACAGTGGGTATCGAACACTGCCCAAGCTGATGTGA 1628
Query 1561 ATGCTGTTACTTGGGGAGTTTTCCCGGCTAAGGAAATCATTCAACCAACCATTGTCGATC 1620
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ATGCTGTAACTTGGGGAGTTTTCCCGGCTAAGGAAATCATTCAACCAACCATTGTCGATC 1688
Query 1621 CCGCTAGCTTCAAAGTCTGGAAGGATGAAGCATTTGAGACTTGGTCAAGAAGCTGGGCTA 1680
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1689 CCGCTAGCTTCAACGTCTGGAAGGATGAAGCATTTGAGACTTGGTCAAGAAGCTGGGCTA 1748
Query 1681 ACTTGTATCCAGAAGCTGACCCTTCCAGAAACTTGCTCGAGGAGGTGAAGAACAGCTACT 1740
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1749 ACTTGTACCCAGAAGCCGACCCTTCCAGAAACTTGCTCGAGGAGGTGAAGAACAGCTACT 1808
Query 1741 ATTTGGTAAGCTTGGTGGAGAACGATTACATCAATGGTAACATATTCGCGGTCTTTGCTG 1800
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 1809 ATTTGGTAAGCTTGGTGGAGAACGATTACATCAATGGTGACATATTCGCGGTGTTTGCTG 1868
Query 1801 ATATTTGAGAAAATCAAGAAACA-CTTACAGTATATCGGTTTCCTACTACTTTCAAGATT 1859
|| |||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||
Sbjct 1869 ATCTTTGAGAAAATCAAGAGACAACT-ACAGTATATCGGTTTCCTACTGCTTTCAAGATT 1927
Query 1860 TGCTTTTGTACTTTCTCTAAAATATTGGGATTTTGGTTTTTACATCTGTCTACCATAACA 1919
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1928 TGCTTTTGTACTTTCTCTAAAATATTGGGATTTTGTTTTTTACATCTGTCTACCATAACA 1987
Query 1920 ATATTGATGTGGCA-GTAATGTTATTGATAAAAAG 1953
|||||||||| || ||||||||||||||||||||
Sbjct 1988 GTATTGATGTG-CAAGTAATGTTATTGATAAAAAG 2021
> AT3G59970.3 | Symbols: MTHFR1 | methylenetetrahydrofolate reductase
1 | chr3:22151195-22154483 FORWARD LENGTH=2047
Length=2047
Score = 1906 bits (1032), Expect = 0.0
Identities = 1555/1808 (86%), Gaps = 33/1808 (2%)
Strand=Plus/Plus
Query 23 GATGAAGGTGATAGATAAGATCCAGTCATTGGCCGACG-AAGGCAAAACAGCGTTT-TCC 80
|||||||||| | ||||||||| | || || | || | ||||| ||||||| ||| |||
Sbjct 108 GATGAAGGTGGTTGATAAGATCAAATCCGTGACGGA-GCAAGGCCAAACAGC-TTTCTCC 165
Query 81 TTCGAATTCTTCCCACCAAAAACAGAAGATGGAGTCGACAATCTCTTTGAGA-GAATGGA 139
||||| || |||||||| || ||||||||||| ||||| ||||||||||| | |||||||
Sbjct 166 TTCGAGTTTTTCCCACCGAAGACAGAAGATGGCGTCGAGAATCTCTTTGA-ACGAATGGA 224
Query 140 TCGAATGGTGGCTTATGGTCCAACGTTTTGCGATATCACATGGGGAGCTGGTGGATCTAC 199
|||| |||| ||||||| || || || ||||||||||| ||||| ||||||||||| ||
Sbjct 225 TCGATTGGTCTCTTATGGACCTACCTTCTGCGATATCACTTGGGGTGCTGGTGGATCCAC 284
Query 200 CGCAGATCTAACGCTTGATATAGCTTCGAGGATGCAAAACGTTGTTTGTGTTGAGAGTAT 259
|| ||||| || || || || ||||| |||||||| || ||| | || || |||| |||
Sbjct 285 AGCTGATCTCACTCTCGAGATTGCTTCTAGGATGCAGAATGTTATCTGCGTCGAGACTAT 344
Query 260 GATGCATCTTACATGTACTAACATGCCTG-TTGAGAAGATTGATCATGCTCTTGAGACCA 318
||||||||| || ||||| |||||||| | |||||||||||||||| || |||||||| |
Sbjct 345 GATGCATCTCACTTGTACCAACATGCC-GATTGAGAAGATTGATCACGCGCTTGAGACGA 403
Query 319 TTAGATCTAATGGTATTCAGAATGTGCTTGCTCTTAGAGGTGATCCTCCTCATGGTCAAG 378
||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 404 TTAGATCTAATGGAATTCAGAATGTGCTTGCTCTTAGAGGAGATCCTCCTCATGGACAAG 463
Query 379 ATAAGTTTGTTCAGGTTGAAGGTGGTTTTGATTGTGCTTTGGATCTCGTTAATCACATTC 438
|||||||||||||||||||||| || |||| ||||||||||||||| || ||||||||||
Sbjct 464 ATAAGTTTGTTCAGGTTGAAGGAGGATTTGCTTGTGCTTTGGATCTGGTGAATCACATTC 523
Query 439 GAAGCAAGTATGGTGATTACTTTGGTATCACTGTTGCTGGTTATCCTGAGGCTCATCCTG 498
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 524 GTAGCAAGTATGGTGATTACTTTGGAATCACTGTTGCTGGTTATCCTGAGGCTCATCCGG 583
Query 499 ATGTTATTGGTG-AGAATGGTCTTGCGT-CTAATGAAGCTTATCAGAGTGATCTTGAGTA 556
||||||||| | | |||| ||||| | || |||| |||||||||||||||||| ||
Sbjct 584 ATGTTATTGAAGCTG-ATGGACTTGC-TACTCCTGAATCTTATCAGAGTGATCTTGCTTA 641
Query 557 TC-TCAAGAAAAAGATTGATGCTGGAGCTGATCTGATTGTTACTCAGCTTTTCTATGATA 615
| | ||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct 642 -CTTGAAGAAAAAGGTTGATGCTGGAGCAGATTTGATTGTGACTCAGCTTTTCTATGATA 700
Query 616 CTGATATATTCCTCAAGTTTGTGAATGATTGTCGGCAAATTGGGATTAATTGTCCCATTG 675
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 701 CTGATATATTCCTCAAGTTTGTGAATGATTGTCGGCAAATCGGGATTAATTGTCCCATTG 760
Query 676 TTCCTGGAATTATGCCTATTAATAACTACAGAGGG-TTCTTGCGTATGACTGGTTTCTGC 734
|||||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||
Sbjct 761 TTCCTGGAATTATGCCTATTTCCAACTACA-AGGGGTTCTTGCGTATGGCTGGTTTCTGT 819
Query 735 AAGACTAAGATACCAGTTGAGGTCA-TGGCGGCCTTGGAGCCTATCAAGGATAATGAAGA 793
||||| |||||||| | |||| ||| || | ||||| |||||||| ||||||||||| ||
Sbjct 820 AAGACCAAGATACCCGCTGAGCTCACTG-CTGCCTTAGAGCCTATTAAGGATAATGACGA 878
Query 794 AGCTGTGAAAGCCTATGGTATTCACCTTGGAACAGAGATGTGTAAAAAGATGTTGGCTCA 853
||||| ||||||||||| |||||| ||| |||||| ||||| |||||||| ||||| ||
Sbjct 879 GGCTGTTAAAGCCTATGGAATTCACTTTGCAACAGAAATGTGCAAAAAGATTTTGGCCCA 938
Query 854 TGGAGTCAAGTCTCTTCATCTCTACACATTGAACATGGAGAAATCAGCTCTTGCAATATT 913
|||| ||| || ||||||||||||||||||||| |||| ||||||||| ||| |||||
Sbjct 939 TGGAATCACTTCCCTTCATCTCTACACATTGAACGTGGACAAATCAGCTATTGGGATATT 998
Query 914 GATGAATCTTGGTATGATTGACGAGTCCAAAATTTCTCGTTCTTTACCATGGAGACGCCC 973
||||| |||||| ||||||| ||||| ||||||||||||||| |||| |||||||||||
Sbjct 999 AATGAACCTTGGTCTGATTGATGAGTCAAAAATTTCTCGTTCTCTACCTTGGAGACGCCC 1058
Query 974 TGCAAATGTTTTCCGTAATAAGGAAGATGTGCGCCCCATTTTCTGGGCAAACCGTCCAAA 1033
||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1059 TGCAAATGTTTTCCGTACTAAGGAAGATGTTCGCCCAATTTTCTGGGCAAACCGTCCAAA 1118
Query 1034 GAGCTACATTTCTAGAACCAAGGGCTGGGAA-GACTTCCCACAAGGCCGGTGGGGTGATT 1092
||||||||| |||||||| ||||||||| || ||||||||||| || || ||||||||||
Sbjct 1119 GAGCTACATATCTAGAACAAAGGGCTGG-AATGACTTCCCACATGGACGTTGGGGTGATT 1177
Query 1093 CACGCAGTGCTTCATATGGTGCACTCTCGGATCATCAGTTCT-CACGTCCACGAGCACGA 1151
||| |||||| |||| || |||| |||||| ||||||| | | || ||| || |||
Sbjct 1178 CACACAGTGCAGCATACAGTACACTTTCGGATTATCAGTT-TGCGCGCCCAAAAGGACGT 1236
Query 1152 GACAAGAAGCTTGAACAAGAATGGGTTGTCCCACTGAAAAGTGTTGAAGATATTCAGGAG 1211
|||||||||||| | ||||||||||| |||||||||||||| |||||||| |||| |||
Sbjct 1237 GACAAGAAGCTTCAGCAAGAATGGGTCGTCCCACTGAAAAGCATTGAAGATGTTCAAGAG 1296
Query 1212 AAATTCAAGGAGCTCTGCCTTGGAAACCTTAAAA-GCAGTCCC-TGGTCTGAATTAGATG 1269
|||||||| ||||||||| |||||||| |||||| |||| ||| ||||||||||||||||
Sbjct 1297 AAATTCAAAGAGCTCTGCATTGGAAAC-TTAAAAAGCAG-CCCATGGTCTGAATTAGATG 1354
Query 1270 GACTCCAGCCAGAGACAAAGATAATAAACGAGCAACT-GGTAAAAATCAACTCCAAAGGC 1328
|||||||||||||||||||||| ||||| |||||||| || ||||||||||||||| ||
Sbjct 1355 GACTCCAGCCAGAGACAAAGATCATAAATGAGCAACTCGG-AAAAATCAACTCCAACGGT 1413
Query 1329 TTCTTGACCATCAATAGCCAACCATCAGTCAACGCCGAGAGATCTGATTCCCCAACTGTT 1388
||| ||||||| |||||||||||||||||||| || | | ||| ||||| ||| || ||
Sbjct 1414 TTCCTGACCATTAATAGCCAACCATCAGTCAATGCAGCCAAATCCGATTCTCCAGCTATT 1473
Query 1389 GGATGGGGAGGTCCTGTTGGATATGTATACCA-AAAGGCTTATCTAGAGTTCTTCTGCTC 1447
|||||||| ||||||| ||| || || ||||| |||| ||||||| ||||||||||| ||
Sbjct 1474 GGATGGGGTGGTCCTGGTGGTTACGTCTACCAGAAAG-CTTATCTGGAGTTCTTCTGTTC 1532
Query 1448 AAAGGAGAAATTAGATGCAGTGGTCGAGAAATGCAAAGCTTTGCCATCGATTACTTACAT 1507
|||||| || ||||| || | || ||||||| ||||||||| || || || || |||||
Sbjct 1533 AAAGGATAAGTTAGACACACTTGTGGAGAAATCCAAAGCTTTTCCTTCTATCACCTACAT 1592
Query 1508 GTCTGTGAACAAAGGAGAAAACTGGGTATCGAACACTGCCCAAG-CTGATGTGAATGCTG 1566
| | ||||||||| ||| || |||||||| ||||| | | | | ||||||||||| |
Sbjct 1593 GGCCGTGAACAAATCAGAGAATTGGGTATCAAACACCGGTGA-GTCCGATGTGAATGCAG 1651
Query 1567 TTACTTGGGGAGTTTTCCCGGCTAAGGAAATCATTCAACCAACCATTGTCGATCCCGCTA 1626
||||||||||||| ||||| |||||||| | |||||||| || || || ||||| || |
Sbjct 1652 TTACTTGGGGAGTGTTCCCAGCTAAGGAGGTTATTCAACCGACGATCGTGGATCCAGCCA 1711
Query 1627 GCTTCAAAGTCTGGAAGGATGAAGCATTTGAGACTTGGTCAAGAAGCTGGGCTAACTTGT 1686
| |||||||||||||| || ||||| ||||||| ||||||||||||||||||||||||||
Sbjct 1712 GTTTCAAAGTCTGGAAAGACGAAGCGTTTGAGATTTGGTCAAGAAGCTGGGCTAACTTGT 1771
Query 1687 ATCCAGAAGCTGACCCTTCCAGAAACTTGCTCGAGGAGGTGAAGAACAGCTACTATTTGG 1746
| ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1772 ACCCAGAAGATGACCCTTCTAGAAAGTTGCTCGAGGAGGTGAAGAACAGCTACTATTTGG 1831
Query 1747 TAAGCTTGGTGGAGAACGATTACATCAATGGTAACATATTCGCGGTCTTTGCT-GATATT 1805
||||||| ||||| ||| |||||||||||||| | || ||| | ||||||||| ||| |
Sbjct 1832 TAAGCTTAGTGGACAACAATTACATCAATGGTGATATCTTCTCTGTCTTTGCTTGATCTC 1891
Query 1806 TGAGAAAA 1813
|||||||
Sbjct 1892 CGAGAAAA 1899
> AT3G59980.1 | Symbols: | Nucleic acid-binding, OB-fold-like
protein | chr3:22154244-22155641 REVERSE LENGTH=1177
Length=1177
Score = 102 bits (55), Expect = 1e-20
Identities = 80/92 (87%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 1723 AGGTGAAGAACAGCTACTATTTGGTAAGCTTGGTGGAGAACGATTACATCAATGGTAACA 1782
||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| | |
Sbjct 1177 AGGTGAAGAACAGCTACTATTTGGTAAGCTTAGTGGACAACAATTACATCAATGGTGATA 1118
Query 1783 TATTCGCGGTCTTTGCT-GATATTTGAGAAAA 1813
| ||| | ||||||||| ||| | |||||||
Sbjct 1117 TCTTCTCTGTCTTTGCTTGATCTCCGAGAAAA 1086
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96736450215
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5