BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483540
Length=1770
Score E
Sequences producing significant alignments: (Bits) Value
AT2G44170.1 | Symbols: NMT2, ATNMT2 | pseudogene, myristoyl-CoA... 2067 0.0
AT5G57020.1 | Symbols: NMT1, ATNMT1 | myristoyl-CoA:protein N-m... 1116 0.0
> AT2G44170.1 | Symbols: NMT2, ATNMT2 | pseudogene, myristoyl-CoA:protein
N-myristoyltransferase (NMT), putative, similar to
N-myristoyltransferase 1 (NMT1) (Arabidopsis thaliana) GI:7339834;
contains Pfam profiles PF01233: Myristoyl-CoA:protein
N-myristoyltransferase N-terminal domain, PF02799: Myristoyl-CoA:protein
N-myristoyltransferase C-terminal domain; gene
contains a frameshift. This could be a pseudogene or a sequencing
error.; blastp match of 62% identity and 5.1e-121
P-value to GP|20804654|dbj|BAB92343.1||AP003273 putative N-myristoyl
transferase {Oryza sativa (japonica cultivar-group)}
| chr2:18265431-18267426 REVERSE LENGTH=1996
Length=1996
Score = 2067 bits (1119), Expect = 0.0
Identities = 1596/1815 (88%), Gaps = 78/1815 (4%)
Strand=Plus/Plus
Query 17 TTTTCTCCGATCGTAGGTCAACTATTTTCCGGCGATCTTCTTCCGATTCTT-CAG-C-C- 72
|||| ||||||||||| |||||||||||||||||||||||||||||||||| | | | |
Sbjct 199 TTTTTTCCGATCGTAGCTCAACTATTTTCCGGCGATCTTCTTCCGATTCTTGCTGTCGCA 258
Query 73 C---A----GA-GCTTTTGGTAAGTAATTCGTCATTGTTGATACTATCG---C-C-CAGT 119
| | || ||||||||| |||| |||| ||||||||||||||| | | | ||||
Sbjct 259 CTTCAACCCGAAGCTTTTGGTTAGTACTTCGCCATTGTTGATACTATAGTGTCGCTCAGT 318
Query 120 TTT-T-G--TTT------CGAATCATGGCTTTGTATCCGATTCTTCATAGCGATTTTTGT 169
||| | | ||| ||| ||||| | ||||||| ||||||||||||||||||| |
Sbjct 319 TTTCTTGGGTTTTTGTTTCGATTCATGACCTTGTATCGGATTCTTCATAGCGATTTT-G- 376
Query 170 CCCCTTGGAAATATGAAAGTATTTGTGTGTTGTTGCTAGAGATTTTGGGATCGCTATGTC 229
| | |||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 377 CTACA---AAATCGGAAAGTATTTGTGTGTTGTTGCTAGAAATTTTGGGATCGCTATGTC 433
Query 230 TAGG-TTAGCTAGCTCGG----G-TT--T-CT-TA---T---TCGT-TTTC--A---GTT 267
|||| ||| | || | | || | || || | ||| |||| | |||
Sbjct 434 TAGGGTTAAAAATCTTGATAATGCTTCATACTGTAAGCTAGCTCGGCTTTCTTATTCGTT 493
Query 268 TTGA-TTCA-T--CATGGTTGTTGCTAGA-GTGT-T-CATGAATGAGCAATCAAATTTTT 320
|| | || | ||||| ||||||| | |||| | ||||| ||||||||||| |||||
Sbjct 494 TTCAGTTTTGTTTCATGGCTGTTGCTTGCTGTGTATTCATGATTGAGCAATCAATTTTTT 553
Query 321 TGTGCAGAGGAAACATCACAATGTCAGATCCAAAAGTGAATCCTGTGGAGGATGCACTAG 380
|||||||| || || |||||||||||||||||| |||| || ||||||||||||||||
Sbjct 554 TGTGCAGACGAT-CA--ACAATGTCAGATCCAAAACTGAAGCCAGTGGAGGATGCACTAG 610
Query 381 TTGCTGATGCCAAGATCTCACAAATTCAATTAGCCAAGGACGATACTTCAGGTGGAACCA 440
|| ||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 611 TTACTGTTGCCAAGAGCTCACAAATTCAATTAGCCAAGGATGATACTTCAGGTGGAACCA 670
Query 441 TACTTGGAAGGTTACTGCAGTGCCAGTGTTGCTCAATGACCCATAAGTTCTGGGAGACTC 500
|| |||||||||||||||||||||||| || | || |||||||||||||||||||||||
Sbjct 671 TAGTTGGAAGGTTACTGCAGTGCCAGTATT-CA-AA-GACCCATAAGTTCTGGGAGACTC 727
Query 501 AACCTGTTGGGCAGTTTAAAGATATCCAGGACACGAGTTTGCCTGAAGGCCCAATTGAGC 560
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 728 AACCTGTTGAGCAGTTTAAAGATATCCAGGACACGAGTTTGCCTGAAGGCCCAATTGAGC 787
Query 561 CCGCAACTTTGGTGTCTGAGGTCAAGCAAGAGCCGTACTACCTTCTTGGTCAATTCGAAT 620
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 788 CCGCAACTTTGGTGTCTGAGGTCAAGCAAGAGCCGTACAACCTTCTTGGTCAATTCGAAT 847
Query 621 GGACCATATGCGATGTGAACTCTGATGATGTGTGTTCAGAGATGTACAACTTTCTCAAGG 680
|||||||||||||| |||||||||| ||| |||||| |||||||||||||||||||||||
Sbjct 848 GGACCATATGCGATATGAACTCTGACGATATGTGTTTAGAGATGTACAACTTTCTCAAGG 907
Query 681 AAAACAATTCTGATGGGGGATATATCACGTATAATTACTCCAGGGAGTATCTAAGGTGGG 740
|||||| | |||||| | | |||| |||| | ||||||| ||||||||||||||||
Sbjct 908 AAAACAGTCCTGATGACA-ACAGATCAAGTATGAGTACTCCAAAGAGTATCTAAGGTGGG 966
Query 741 CATTGTGTCCACCTGGTTATTACCGGAGCTGGCATATTGGAGTCCGTGTCAAGACCTCCA 800
|| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 967 CACTGTGTCCACCTGGTTATTACCAGAGCTGGCATATTGGAGTCCGCGTCAAGACCTCCA 1026
Query 801 AGAAACTTGTTGCTTTCATCAGTGGC-GTGCCAGA-AAGAATTAGGGTGCATGATGAGGT 858
||||||| ||||||||||| ||||| | |||| | |||||| ||||||| |||||||||
Sbjct 1027 AGAAACTCATTGCTTTCATCTGTGGCAG-GCCA-ACAAGAATCAGGGTGCGTGATGAGGT 1084
Query 859 TGTTAAAATGGCAAAGATCAATTTCTTGTGTGTTCACAAGAAGCTCAGGTCTAAGGGACT 918
|||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1085 TGTTAAAATGGCGAAGGTCAATTCCTTGTGTGTTCACAAGAAGCTCAGGTCTAAGGGACT 1144
Query 919 TGCTCCTGTCATGATCAAGGAGTTGACTAGAAGGGTTCACTTGCAAAATATATGGCAAGC 978
||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||||||
Sbjct 1145 TGCTCCTCTCATGATCAAGGAGTTGACTAGAAGGGTTAAGTTGCAGAATATATGGCAAGC 1204
Query 979 GGCTTATACCTCACGTCATATACTTTCTAGACCAGTCACCACCTGTAGACACTGGGTCAG 1038
||||||||||||| |||||||||||||||||||||| |||||| || || ||||||||||
Sbjct 1205 GGCTTATACCTCAAGTCATATACTTTCTAGACCAGTTACCACCAGTCGAGACTGGGTCAG 1264
Query 1039 AATGTTGAACCCGAAGAAGCTAATCGATGCTGGATTGACAAGGCTTCGTGACAGAATGAC 1098
||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||
Sbjct 1265 AATGTTGAACCCGAAGAAGCTAATCGATGTTGGGTTAACAAGGCTTCGTGACAGAATGAC 1324
Query 1099 ATTGAGCAGGACCATCAAACTTTACAAGTTACCAGATGCACCGATCACTCCTGGATTTAG 1158
| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1325 AATGAGCAGGACCGTCAAACTCTACAAGTTACCAGATGCACCGATCACTCCTGGATTTAG 1384
Query 1159 GGAAATGGAGCGCCGTGATGTCCCCGCTGTTACAGAGTTGCTCAGGAAATACCTTTGCCA 1218
|||||||||||| ||||||||||| |||||||||| |||||||||||| |||||| ||||
Sbjct 1385 GGAAATGGAGCGACGTGATGTCCCTGCTGTTACAGCGTTGCTCAGGAACTACCTTAGCCA 1444
Query 1219 GTTTGGAGTTGCGACTGACTTTGATGAAAACTATGTCAAGCACTGGCTTCTCCCAAGGGA 1278
||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1445 GTTTGCAGTTGCGACTGACTTTGATGACAACGATGTCAAGCACTGGCTTCTCCCAAGGGA 1504
Query 1279 AAATATCATCTACAGTTACTTAGTAGTAAGCCCTGAAACTCATGATGTCACTGACTTTTG 1338
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1505 AAATATTGTCTACAGTTACGTAGTAGTAAGCCCTGAAACTCATGATGTCACTGACTTCTG 1564
Query 1339 CAGCTTCTATACTGTC-TCTATAACTATCCCCGGTAACCAGAAATACACGACAGTGAAAG 1397
|||||||| | | || |||||||||||||||||||||| |||||||||||| || ||
Sbjct 1565 CAGCTTCTGCAAT-TCCTCTATAACTATCCCCGGTAACCGGAAATACACGACCCTGGAAT 1623
Query 1398 GTGTTTATTCTTACTGCAATGTAGCGACACTGACCTCGTT-TCCCCAGTTGATGAATGAT 1456
||| |||| ||| ||||||||||||||||||||||||||| |||| || || ||||||||
Sbjct 1624 GTGCTTATGCTTGCTGCAATGTAGCGACACTGACCTCGTTATCCC-AGCTGGTGAATGAT 1682
Query 1457 GCACTAATCGTCGCTAAGCAAAAAGGTTTCGATGTGTTCTATGCATCGGATGTGATGCAG 1516
|| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1683 GCCCTAATAGTCTCTAAGCAAAAAGGTTTCGATGTGTTTTATGCCTCGGATGTGATGCAG 1742
Query 1517 AATGAGAGTTTCTTGAAAGAGTTGAGGTTTTATCCAGGATGTGGACAGGT-GCACTACTA 1575
|||||||||||||||||||||||||||||||||||| |||| ||||| | |||||||||
Sbjct 1743 AATGAGAGTTTCTTGAAAGAGTTGAGGTTTTATCCACTATGTCGACAG-TCGCACTACTA 1801
Query 1576 TCTCTACAATTACCGTTTGAGAAATGGATTAAAGCCATCAGAACTTGGGATTGTTCTCTA 1635
|||||||||||||||||||||||||| ||| |||||||||||||||||| || |||| ||
Sbjct 1802 TCTCTACAATTACCGTTTGAGAAATGCATTGAAGCCATCAGAACTTGGGCTTATTCTTTA 1861
Query 1636 GTACTGTTAAAATCTCTACTACTGTTCTCTAATGTGAACAATCTATGATCATTAAACCAA 1695
|| |||||||| | || | | | || | ||||||||||| ||||||||||||||||||
Sbjct 1862 GTTTTGTTAAAACCACTGTTCCCGCTCCCCAATGTGAACAAACTATGATCATTAAACCAA 1921
Query 1696 TGTGTAGCCTAAGATTCCTCTTCCTAGATATCATTTGCAAGTAATATAAACAAACGTTTA 1755
||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||
Sbjct 1922 TGTGTAGCCTAAGATTCCTCTTCCTGGATATCATTTGCAAGTATTATAAACAAAAGTTTA 1981
Query 1756 AAGCCTTTTTATCTT 1770
|||||||||||||||
Sbjct 1982 AAGCCTTTTTATCTT 1996
Score = 182 bits (98), Expect = 1e-44
Identities = 114/122 (93%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 1 TTATCTTTTCTCTCACTTTTCTCCGATCGTAGGTCAACTATTTTCCGGCGATCTTCTTCC 60
|||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 4 TTATGTTTTCTCTCACTTTTCTCCGATCGTAGCTCAGCTATTTTCCGGCGATCTTCTTCC 63
Query 61 GATTCTTCAGCCCAGAGCTTTTGGTAAGTAATTCGTCATTGTTGATACTATCGCCCAGTT 120
||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 64 GATTCTTCAACCCGGAGCTTTTGGTAAGTAATTCGTGATTGTTGATACTATCGCTTAGTT 123
Query 121 TT 122
||
Sbjct 124 TT 125
> AT5G57020.1 | Symbols: NMT1, ATNMT1 | myristoyl-CoA:protein N-myristoyltransferase
| chr5:23074867-23076901 FORWARD LENGTH=1720
Length=1720
Score = 1116 bits (604), Expect = 0.0
Identities = 1037/1243 (83%), Gaps = 42/1243 (3%)
Strand=Plus/Plus
Query 416 AAGGACGATACTTCAGGTGG-AACCATACTTGGAAGGTTACTGCAGTGCCAGTGT-TG-C 472
||||| |||||||| | ||| ||||||| || ||||||| | | | | || ||| |
Sbjct 345 AAGGATGATACTTC-GCTGGAAACCATAGTTCGAAGGTTCCAGGA-T-TCAATGTCAGAG 401
Query 473 TCAATGACCCATAAGTTCTGGGAGACTCAACCTGTTGGGCAGTTTAAAGATATCCAGGAC 532
||| ||| |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 402 GCAAAGACTCATAAGTTCTGGGAGACTCAACCTGTTGGGCAGTTTAAGGATATTGGGGAT 461
Query 533 ACGAGTTTGCCTGAAGGCCCAATTGAGCCCGCAACTTTGGTGTCTGAGGTCAAGCAAGAG 592
||||||||||||||||| || |||||||| |||||| | |||||||| |||||||||
Sbjct 462 ACGAGTTTGCCTGAAGGTCCGATTGAGCCTGCAACTCCATTATCTGAGGTTAAGCAAGAG 521
Query 593 CCGTACTACCTT-CTTGGTCAATT-CGAATGGACCATATGCGATGTGAACTCTGATGATG 650
|||||| ||||| ||| | || ||| ||||| | ||| ||| ||||||||||||||
Sbjct 522 CCGTACAACCTTCCTT-CT-GTTTACGAGTGGACGACATGTGATATGAACTCTGATGATA 579
Query 651 TGTGTTCAGAGATGTACAACTTTCTCAAGGAA-AAC-A-ATT-CTGATG--GGGGATAT- 703
||||||||||| | |||||| ||||||| ||| ||| | || |||| | | ||||
Sbjct 580 TGTGTTCAGAGGTATACAACCTTCTCAA-GAACAACTATGTTGAGGATGATGAGAATATG 638
Query 704 ATCACGTAT-AATTACTCCAGGGAGTATCTAAGGTGGGCATTGTGTCCACCTGGTTATTA 762
||| || | |||||||||| ||||| ||||||||||||| | ||||||| ||||||||
Sbjct 639 TTCAGGT-TCAATTACTCCAAGGAGTTTCTAAGGTGGGCACTACGTCCACCGGGTTATTA 697
Query 763 CCGGAGCTGGCATATTGGAGTCCGTGTCAAGACCTCCAAGAAACTTGTTGCTTTCATCAG 822
|| |||||||||||||||||| || | |||||| || |||||||| ||||||||||||||
Sbjct 698 CCAGAGCTGGCATATTGGAGTTCGAGCCAAGACTTCGAAGAAACTCGTTGCTTTCATCAG 757
Query 823 TGGCGTGCCAGAAAGAATTAGGGTGCATGATGAGGTTGTTAAAATGGCAAAGATCAATTT 882
|||||||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||
Sbjct 758 CGGCGTGCCAGCAAGAATCAGGGTGCGTGATGAGGTTGTTAAAATGGCAGAGATCAATTT 817
Query 883 CTTGTGTGTTCACAAGAAGCTCAGGTCTAAG-GGACTTGCTCCTGTCATGATCAAGGAGT 941
||||||||||||||||||||||||||||||| || || |||||||||||||||||||||
Sbjct 818 CTTGTGTGTTCACAAGAAGCTCAGGTCTAAGAGG-CTCGCTCCTGTCATGATCAAGGAGG 876
Query 942 TGACTAGAAGGGTTCACTTGCAAAATATATGGCAAGCGGCTTATACCT-CACGTCATATA 1000
|||||||||||||||||||| | || ||||||||||| |||||||| | || | |||
Sbjct 877 TGACTAGAAGGGTTCACTTGGAGAACATATGGCAAGCAGCTTATAC-TGCAGGAGTTATC 935
Query 1001 CTTTCTAGACCAGTCACCACCTGT-AGACACTGGGTCAGAATG-TTGAACCCGAAGAAGC 1058
||| ||| |||| ||||||||||| | | ||||| ||| | ||||||||||||||||
Sbjct 936 CTTCCTACACCAATCACCACCTGTCA-ATACTGGCACAGG-TCATTGAACCCGAAGAAGC 993
Query 1059 TAATCGATGCTGGATTGACAAGGCTTCGTGAC-AGAATGACATTGAGCAGGACCATCAAA 1117
|||| |||| ||| || |||||||| ||| | ||||||||| ||||||| |||||||||
Sbjct 994 TAATTGATGTTGGGTTTTCAAGGCTTGGTG-CGAGAATGACAATGAGCAGAACCATCAAA 1052
Query 1118 CTTTACAAGTTACCAGATGCACCGATCACTCCTGGATTTAGGGAAATGGAGCGC-CGTGA 1176
|| ||||||||||||||||||||||||||||||||||| ||| ||||||| | | || ||
Sbjct 1053 CTCTACAAGTTACCAGATGCACCGATCACTCCTGGATTCAGGAAAATGGAAC-CACGCGA 1111
Query 1177 TGTCCCCGCTGTTACA-GAGTTGCTCAGGAAATACCTTTGCCAGTTTGGAGTTGCGACTG 1235
|||||| ||||||||| | |||||| ||||| ||||| ||||||||||||| |||||||
Sbjct 1112 TGTCCCTGCTGTTACACG-GTTGCTTAGGAACTACCTCAGCCAGTTTGGAGTCGCGACTG 1170
Query 1236 ACTTTGATGAAAACT-ATGTCAAGCACTGGCTTCTCCCAAGGGAAAATATCATCTACAGT 1294
|||||||||| || | ||||| |||| ||||| |||||||| ||| || || | |||||
Sbjct 1171 ACTTTGATGAGAA-TGATGTCGAGCATTGGCTACTCCCAAGAGAAGATGTCGTGGACAGT 1229
Query 1295 TACTTAGTAGTAAGCCCTGAAACTCATGATGTCACTGACTTTTGCAGCTTCTATACTGTC 1354
||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||| ||
Sbjct 1230 TACCTAGTAGAAAGCCCTGAAACTCACGATGTCACTGACTTCTGCAGCTTCTACACTCTC 1289
Query 1355 TCTAT-AACTATCCCCGGTAACCAGAAATACACGACAGTGAAAGGTGTTTATTCTTACTG 1413
|| | ||| |||| |||||||| ||| ||||| ||| |||||| || ||||||||||
Sbjct 1290 CCT-TCAACCATCCTCGGTAACCCGAACTACACTACATTGAAAGCTGCGTATTCTTACTA 1348
Query 1414 CAATGTAGCGACACTGACCTCGTTTCCCCAGTTGATGAATGATGCACTAATCGTCGCTAA 1473
|||||| || |||| ||||||||||| ||| ||||||||||||| ||||| ||| | ||
Sbjct 1349 CAATGTGGCCACACAGACCTCGTTTCTTCAGCTGATGAATGATGCGCTAATTGTCTCAAA 1408
Query 1474 GCAAAAAGGTTTCGATGTGTTCTATGCATCGGATGTGATGCAGAATGAGAGTTTCTTGAA 1533
|||||| ||||||||||||||| | || | |||||||||||| |||||||||||||||||
Sbjct 1409 GCAAAAGGGTTTCGATGTGTTCAACGCGTTGGATGTGATGCACAATGAGAGTTTCTTGAA 1468
Query 1534 AGAGTTGAGGTTTTATCCAGGATG-TGGACAGGTGCACTACTATCTCTACAATTACCGTT 1592
||| ||| |||| |||||| | |||||| | || ||||||||||||||||||||||
Sbjct 1469 AGAACTGAAGTTTGGGCCAGGA-GATGGACAACTTCATTACTATCTCTACAATTACCGTT 1527
Query 1593 TGAGAAA-TGGATTAAAGCCATCAGAACTTGGGATTGTTCTCT 1634
||| ||| || || |||||| | ||||| ||| |||||||||
Sbjct 1528 TGA-AAAGTGCCTTGAAGCCAGCGGAACTCGGGCTTGTTCTCT 1569
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87549750480
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5