BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483541
Length=1417
Score E
Sequences producing significant alignments: (Bits) Value
AT2G44180.1 | Symbols: MAP2A | methionine aminopeptidase 2A | c... 2268 0.0
AT3G59990.1 | Symbols: MAP2B | methionine aminopeptidase 2B | c... 1293 0.0
> AT2G44180.1 | Symbols: MAP2A | methionine aminopeptidase 2A |
chr2:18269243-18271860 REVERSE LENGTH=1600
Length=1600
Score = 2268 bits (1228), Expect = 0.0
Identities = 1356/1418 (96%), Gaps = 8/1418 (1%)
Strand=Plus/Plus
Query 1 GAA-ACCGAAGCCGAGTCCTCTAATGGAAAAGAGACTCAATT-AGCTTCTGACTTAACGA 58
||| || ||||||||||||||||||||||| ||| |||| || || ||||||||||||||
Sbjct 117 GAACACTGAAGCCGAGTCCTCTAATGGAAACGAGTCTCAGTTAAG-TTCTGACTTAACGA 175
Query 59 AGAATCTTGATCTTGCTCAAGTGAAGGAACACGAAAAGGATGATAACC---AAGAAGAAG 115
||| ||||||||| ||| ||||||||||| ||||||||||| |||||| |||||||||
Sbjct 176 AGAGTCTTGATCTGGCTGAAGTGAAGGAAGACGAAAAGGATAATAACCAAGAAGAAGAAG 235
Query 116 ATGGACTGAAAGCTGAGCCTTCAACgaagaagaagaagaagaaaagtaaaagcaagaaga 175
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 ATGGACTGAAAGCTGAGGCTTCAACGAAGAAGAAGAAGAAGAAAAGTAAAAGCAAGAAGA 295
Query 176 agaagaGTTCCCTTCAACAGACTGATCCACCTTCAATTCCTGTTCTTGAGCTCTTCCCTT 235
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 296 AGAAGAGTTCTCTTCAACAGACTGATCCTCCTTCAATTCCTGTTCTTGAGCTCTTCCCTT 355
Query 236 CTGGAGATTTTCCTGAAGGTGAAATCCAACAGTATAAGGATGATAATTTGTGGAGAACAA 295
|||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 356 CTGGAGATTTTCCTCAAGGTGAAATCCAACAGTACAATGATGATAATTTGTGGAGAACAA 415
Query 296 CATCTGAAGAGAAGAGAGAGATGGAGCGGCTGCAAAAGCCGATATATAACTCTCTTCGCC 355
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 416 CATCTGAAGAGAAGAGAGAGATGGAGAGGCTGCAAAAGCCGATATATAACTCTCTTCGCC 475
Query 356 AAGCAGCAGAAGTTCATCGTCAAGTTAGGAAGTATATGAGAAGTATATTGAAGCCTGGAA 415
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 AAGCAGCGGAAGTTCATCGTCAAGTTAGGAAGTATATGAGAAGTATATTGAAGCCTGGAA 535
Query 416 TGTTGATGATTGATCTCTGTGAGACCTTAGAGAACACCGTTCGTAAGTTGATATCAGAGA 475
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 536 TGTTGATGATTGATCTCTGTGAGACTTTAGAGAACACTGTTCGTAAGTTGATATCAGAGA 595
Query 476 ATGGTCTTCAAGCTGGTATCGCCTTTCCTACAGGATGTTCTCTGAATAATGTTGCTGCTC 535
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 596 ATGGTCTTCAAGCTGGTATCGCCTTTCCTACAGGATGTTCACTGAATAATGTTGCTGCTC 655
Query 536 ATTGGACACCAAACTCTGGAGATAAGACTGTCCTTCAGTATGATGATGTGATGAAGCCAG 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 656 ATTGGACACCAAACTCTGGAGATAAGACTGTCCTTCAGTATGATGATGTGATGAAGCTGG 715
Query 596 ATTTTGGAACACATATTGATGGGCATATTGTTGATTCCGCTTTTACAGTTGCATTCAATC 655
||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct 716 ATTTTGGAACACATATTGATGGGCACATTGTTGATTCTGCTTTTACAGTTGCGTTCAATC 775
Query 656 CTATGTATGATCCTCTCTTAGCAGCTTCCCGTGAAGCAACATATACCGGTATCAAGGAAG 715
|||||| ||||||||| |||||||| || ||||| ||||||||||| |||||||||||||
Sbjct 776 CTATGTTTGATCCTCTTTTAGCAGCCTCGCGTGACGCAACATATACTGGTATCAAGGAAG 835
Query 716 CCGGTGTAGATGTTCGGCTCTGTGATGTTGGTGCTGCAATTCAGGAGGTCATGGAGTCTT 775
|||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 836 CCGGGGTAGATGTCCGGCTCTGTGATGTTGGTGCTGCAGTTCAGGAGGTCATGGAGTCTT 895
Query 776 ATGAGGTTGATATCAATGGAAAAGTCTACCAAGTCAAGAGTATCAGAAACCTGAATGGGC 835
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 896 ATGAGGTTGAAATCAATGGAAAAGTCTACCAAGTCAAAAGTATCAGAAACCTGAATGGGC 955
Query 836 ACAGCATTGGACGCTATCAGATACACGCCGAAAAATCTGTTCCTAATGTTAGAGGAGGCG 895
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 956 ACAGCATTGGACGCTATCAGATACACGCTGAAAAATCAGTTCCTAATGTTAGAGGAGGCG 1015
Query 896 AGCAGACGAAAATGGAAGAGGGTGAATTATATGCCATTGAAACATTTGGATCAACAGGGA 955
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1016 AGCAGACGAAAATGGAAGAGGGTGAATTATATGCCATTGAAACTTTTGGATCAACAGGGA 1075
Query 956 AGGGATATGTAAGAGAGGACTTAGAATGTAGCCATTACATGAAAAACTATGATGTGGGTC 1015
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 AAGGATATGTAAGAGAAGACTTAGAATGTAGCCATTACATGAAAAACTATGATGTGGGTC 1135
Query 1016 ACGTACCTTTGAGGTTACCAAGAGCAAAACAACTCCTTGCCACTATTAACAAGAACTTCT 1075
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1136 ATGTACCTTTGAGGTTACCAAGGGCAAAACAACTCCTTGCCACTATTAACAAGAACTTCT 1195
Query 1076 CCACTCTAGCCTTCTGCAGACGCTATTTGGACCGCCTTGGTGAAACAAAATATTTGATGG 1135
|||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1196 CCACGCTAGCCTTCTGCAGACGTTATTTGGACCGCCTTGGTGAAACAAAATACTTGATGG 1255
Query 1136 CTTTAAAGAATCTTTGTGATTCTGGCATTATTGAGCCATGCCCTCCAGTTTGTGATGTGA 1195
|||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| |
Sbjct 1256 CTTTAAAGAATCTTTGTGATTCTGGCATAATTGAGCCATGTCCTCCAGTGTGTGATGTCA 1315
Query 1196 AAGGAAGCTATATTTCTCAGTTTGAGCATACAATCTTGTTGCGACCAACTTGCAAAGAGA 1255
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1316 AAGGAAGCTATATTTCTCAGTTTGAGCATACAATCCTGTTGCGACCAACTTGCAAAGAGA 1375
Query 1256 TTATTTCCAAAGGAGACGATTATTGAAATGGTGATTTTCACAGAACTTGAAGCAGTTGTT 1315
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1376 TTATTTCCAAAGGAGACGATTATTGAAATAGTGATTTTCACAGAACTTGAAGCAGTTGTT 1435
Query 1316 CTTCTTGAGTTTGTATAATAGTTTTGGAAGGCTTTTAAAGTCTTGTGCTCAAATATTTGT 1375
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1436 CTTCTTGAGTTTGTATAATAGTTTTGGAAGGCTTTTTAAGTCTTGTGCTCAAATATTTGT 1495
Query 1376 ATGTTCTTCGAATATGATTCTAA-TCATAAGAGCTTAG 1412
|||||||||||| |||||||||| | ||||||||||||
Sbjct 1496 ATGTTCTTCGAAGATGATTCTAAGT-ATAAGAGCTTAG 1532
> AT3G59990.1 | Symbols: MAP2B | methionine aminopeptidase 2B |
chr3:22155719-22158730 REVERSE LENGTH=1621
Length=1621
Score = 1293 bits (700), Expect = 0.0
Identities = 1094/1282 (85%), Gaps = 35/1282 (3%)
Strand=Plus/Plus
Query 13 GAGTCCTCTAATGGAAAAGA-GACTCAATTAGCTTCTGA-CTTAACGAAGAATCTTGATC 70
|||||||||||||| ||||| || ||||| | ||||| ||| ||||||| |||||
Sbjct 160 GAGTCCTCTAATGGTAAAGAGGA-ACAATTGGAATCTGAGCTT-TCGAAGAAGCTTGAGA 217
Query 71 TTGCTCAAGTGAAGGAACACGAAAAGGATGATAACCAAGAAGAAGATGGACTG-AAAGCT 129
|||| || || || | || |||| | ||| | | |||||| ||| | ||||||
Sbjct 218 TTGCAGAA--GATGG---TC-AAGAGGA-G--AACGATGGAGAAGAAGGA-AGCAAAGCT 267
Query 130 GAGCCTTCAACgaagaagaagaagaagaaaagtaaaagcaagaagaagaa-gaGTTCCCT 188
||| ||||||||||||||||||||||||||| |||||||||||||||||| || ||||
Sbjct 268 GAGACTTCAACGAAGAAGAAGAAGAAGAAAAATAAAAGCAAGAAGAAGAAGGAACTCCC- 326
Query 189 TCAACAGACTGATCCACCTTCAATTCCTGTTC-TTGAGCTCTTCCCTTCTGGAGATTTTC 247
||||||||||||||||||||||||||||| || ||||||||||||| || ||||| ||||
Sbjct 327 TCAACAGACTGATCCACCTTCAATTCCTG-TCGTTGAGCTCTTCCCATCAGGAGAGTTTC 385
Query 248 CTGAAGGTGAAATCCAACAGTATAAGGATGATAAT-TTGTGGAGAACAACATCTGAAGAG 306
||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct 386 CTGAAGGTGAAATCCAAGAGTATAAGGATGATAATCTT-TGGAGAACAACATCTGAAGAG 444
Query 307 AAGAGAGAGATGGAGCG-GCTGCAAAAGCCGATATATAACTCTCTTCGCCAAGCAGCAGA 365
||||||||| ||||||| || ||||||| |||||||||||| |||||| ||| |||||
Sbjct 445 AAGAGAGAGCTGGAGCGTTTTG-AAAAGCCAATATATAACTCTGTTCGCCGAGCTGCAGA 503
Query 366 AGTTCATCGTCAAGTTAGGAAGTATATGAGAAGTATATTGAAGCCTGGAATGTTGATGAT 425
||||||||| || ||| | || ||| | ||||| ||| |||||||||||||||||||||
Sbjct 504 AGTTCATCGCCAGGTTCGTAAATATGTCAGAAGCATAGTGAAGCCTGGAATGTTGATGAC 563
Query 426 TGATCTCTGTGAGACCTTAGAGAACACCGTTCGTAAGTTGATATCAGAGAATGGTCTTCA 485
|||| | ||||||||| ||||||| || ||||||||||||||||||||||||||||||||
Sbjct 564 TGATATATGTGAGACCCTAGAGAATACTGTTCGTAAGTTGATATCAGAGAATGGTCTTCA 623
Query 486 AGCTGGTATCGCCTTTCCTACAGGATGTTCTCTGAATAATGTTGCTGCTCATTGGACACC 545
||||||||| || || ||||||||||| ||| ||||| || |||||||||||||||||
Sbjct 624 AGCTGGTATTGCATTCCCTACAGGATGCTCTTTGAATTGGGTCGCTGCTCATTGGACACC 683
Query 546 AAACTCTGGAGATAAGACTGTCCTTCAGTATGATGATGTGATGAAGCCAGATTTTGGAAC 605
||||||||||||||||||||| |||||||| || ||||| ||||| || ||||||||
Sbjct 684 AAACTCTGGAGATAAGACTGTACTTCAGTACGACGATGTTATGAAATTGGACTTTGGAAC 743
Query 606 ACATATTGATGGGCATATTGTTGATTCCGCTTTTACAGTTGCATTCAATCCTATGTAT-G 664
||||||||||||||||||| |||| | || ||||||||||| ||||| ||||||| | |
Sbjct 744 ACATATTGATGGGCATATTATTGACTGTGCATTTACAGTTGCCTTCAACCCTATGT-TCG 802
Query 665 ATCCTCTCTTAGCAGCTTCCCGTGAAGCAACATATACCGGTATCAAGGAAGCCGGTG-TA 723
|||||||||||||||| || |||||||| || |||||||||||||||||||| || | |
Sbjct 803 ATCCTCTCTTAGCAGCCTCTCGTGAAGCTACGTATACCGGTATCAAGGAAGCTGG-GATC 861
Query 724 GATGTTCGGCTCTGTGATGTTGGTGCTGCAATTCAGGAGGTCATGGAGTCTTATGAGGTT 783
||||| || ||||||||| | |||||||| ||||||||||||||||||||||||||||||
Sbjct 862 GATGTCCGTCTCTGTGATATCGGTGCTGCTATTCAGGAGGTCATGGAGTCTTATGAGGTT 921
Query 784 GATATCAATGGAAAAGTCTACCAAGTCAAGAGTATCAGAAACCTGAATGGGCACAGCATT 843
|| ||||| ||||| |||| |||||| || |||||| ||||| ||||||| |||||||||
Sbjct 922 GAAATCAACGGAAAGGTCTTCCAAGTTAAAAGTATCCGAAACTTGAATGGTCACAGCATT 981
Query 844 GGACGCTATCAGATACACGCCGAAAAATCTGTTCCTAAT-GTTAGAGGAGGCGAGCAGAC 902
|||| |||||||||||| || | ||||||||||||| | || | |||||||||||||||
Sbjct 982 GGACCCTATCAGATACATGCTGGGAAATCTGTTCCTA-TCGTAAAAGGAGGCGAGCAGAC 1040
Query 903 GAAA-ATGGAAGAGGGTGAATTATATGCCATTGAAACATTTGGATCAACAGGGAAGGGAT 961
||| ||||||||||| || || |||||||| ||||||||||||||||| ||||| ||||
Sbjct 1041 -AAAGATGGAAGAGGGCGAGTTTTATGCCATCGAAACATTTGGATCAACCGGGAAAGGAT 1099
Query 962 ATGTAAGAGAGGACTTAGAATGTAGCCATTACATGAAAAACTATGATG-TGGGTCACGTA 1020
|||| ||||| ||| |||||||||||||||||||||| |||| ||| | ||| |||||
Sbjct 1100 ATGTGAGAGAAGACCTAGAATGTAGCCATTACATGAAGAACTTTGACGCTGGC-CACGTC 1158
Query 1021 CCTTTGAGGTTACCAAGAGCAAAACAACTCCTTGCCACTATTAACAAGAACTTCTCCACT 1080
|| |||||||| || |||||||||||||||||||| || ||||||||||| ||||| |||
Sbjct 1159 CCCTTGAGGTTGCCTAGAGCAAAACAACTCCTTGCAACCATTAACAAGAATTTCTCGACT 1218
Query 1081 CTAGCCTTCTGCAGACGCTATTTGGACCGCCTTGGTGAAACAAAATATTTGATGGCTTTA 1140
|| |||||||||||||| |||||||||||| |||||||||| ||||| || |||||| ||
Sbjct 1219 CTCGCCTTCTGCAGACGTTATTTGGACCGCATTGGTGAAACCAAATACTTAATGGCTCTA 1278
Query 1141 AAGAATCTTTGTGATTCTGGCATTATTGAGCCATGCCCTCCAGTTTGTGATGTGAAAGGA 1200
|||||||||||||| ||||||||| || |||| | ||||| | |||||||||||||||
Sbjct 1279 AAGAATCTTTGTGACTCTGGCATTGTTCAGCCGTATCCTCCTCTGTGTGATGTGAAAGGA 1338
Query 1201 AGCTATATTTCTCAGTTTGAGCATACAATCTTGTTGCGACCAACTTGCAAAGA-GATTAT 1259
|||||| | || |||||||| || || || || ||||||| ||||||||||| | || |
Sbjct 1339 AGCTATGTATCACAGTTTGAACACACCATTTTACTGCGACCTACTTGCAAAGAAG-TTCT 1397
Query 1260 TTCCAAAGGAGACGATTATTGA 1281
||||| |||||||| || |||
Sbjct 1398 CTCCAAGGGAGACGACTACTGA 1419
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69828958095
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5