BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483622
Length=1767
Score E
Sequences producing significant alignments: (Bits) Value
AT2G44930.1 | Symbols: | Plant protein of unknown function (DU... 2468 0.0
AT2G28580.1 | Symbols: | Plant protein of unknown function (DU... 1162 0.0
> AT2G44930.1 | Symbols: | Plant protein of unknown function (DUF247)
| chr2:18529523-18531752 REVERSE LENGTH=1806
Length=1806
Score = 2468 bits (1336), Expect = 0.0
Identities = 1613/1740 (93%), Gaps = 45/1740 (3%)
Strand=Plus/Plus
Query 42 TATATCAGCATACATGGCCAAGGAGAAGGAACCGCTGATGGAGGATCTAGAACAAGGAAT 101
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 69 TATATCAGCATACATGGCCAAGGAGAAGCAACCGCTGATGGAGGATCTAGAACAAGGAAT 128
Query 102 ACAGCT-A--ACCAGTGAGAATGAAACCGGCGGGTCTGGTAACGTGGGTAGATGGAGCGA 158
|||||| | || || |||||||||| | ||| |||||||| |||||||||||||||||
Sbjct 129 ACAGCTAAGTACGAGGGAGAATGAAA-C--CGGATCTGGTAAAGTGGGTAGATGGAGCGA 185
Query 159 AGGATTTCGTGATCCATTGGTTCCTAAACACGGAACAGCTGAGAAAGCAAAGGTTCTTTC 218
|||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||
Sbjct 186 AGGATTTCGTGATCCATTGGTTTCTAAACACGGAACAGCTGAGAAAGCAAAGATTGTTTC 245
Query 219 GGTCACCACTAAACCGTATAAACCGG-TTCCTTGCTCTGAATCTGAGATTTCCGGTATAT 277
||||| ||||||||||||||||||| || |||||| |||||||||||||||||||||||
Sbjct 246 TGTCACGACTAAACCGTATAAACCGGATT-CTTGCTATGAATCTGAGATTTCCGGTATAT 304
Query 278 GGCCTTCTTCATTTAGC---GAGTATTGTTGCATTTATAGAGTACCTAACCGGTTAAGGA 334
|||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 305 GGCCTTCTTCGTTTAGCAAAGAGTATTGTTGCATCTATAGAGTACCTAACCGGTTAAGGA 364
Query 335 GAGTGAACCCAGATGCATACACTCCTCAAATGCTTCTCATCGGTCCACTTCAACATTCTA 394
|||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 365 GAGTTAATCCAGAGGCATACACTCCTCAGATGCTTCTCATCGGTCCACTTCAACATTCTA 424
Query 395 AGAAAGCTCAA-GCTCTTGAGCTCTCCAAAACCGATTCGAGATATTTGGACTATATGAAC 453
|||||||| || || |||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 425 AGAAAGCT-AATGCCCTTGAGCTTTCCAAAACCGATTTAAGATATTTGGACTATATGAAC 483
Query 454 ATGGAACTTCACAAGGAGAAGTACCTTAATGCTATTGCAAATAAATATGGAGAACAAATT 513
||||| ||||||||| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct 484 ATGGAGCTTCACAAGAAGAAGTACCTTAATGCTATTGCAAATAAATATGGGGATCAAATT 543
Query 514 ATCGAAGTTTTC-AGGAAAATCATAAG-AACAAGTGAGAAATTTATAAGAGAAAGCTACG 571
|||||||||||| ||| | ||||| || ||||||||||||||| | |||||||||||||
Sbjct 544 ATCGAAGTTTTCAAGG-AGATCAT-AGAAACAAGTGAGAAATTCGTTAGAGAAAGCTACG 601
Query 572 CCGAGTCAACGGAGTGGATCAAATCC-CAAGAGTTCGTGGAAATGATCCTCCTCGACTCG 630
||||||||||||| ||||||||| || ||||| ||||| || |||||||| |||||||||
Sbjct 602 CCGAGTCAACGGACTGGATCAAA-CCTCAAGATTTCGTTGATATGATCCTTCTCGACTCG 660
Query 631 GTGTTCATACTAGGGTTCTTTATTCAGACTGAAACTACTCAAAACATCAAGAAGAAAGAA 690
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 661 GTGTTCATACTAGGGGTCTTTATTCAGGCTGAAACTACTCAAAACATCAAGAAGAAAGAA 720
Query 691 GCAATTCTTTTCCATGAAGAAGATATTCTTTTCCAGGAGCCTTGTCTCATAACCACTATT 750
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 721 GAAATTCTTTTCCATGAAGAAGATATTATTTTCCAGGAGCCTTGTCTCATAACCACTATT 780
Query 751 TTAGAAGACCTAATCTTGCTCGAGAACCAACTCCCTTATGTCCTTTTAGAGGAACTCTCT 810
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 781 TTAGAAGACCTAATCTTACTCGAGAACCAACTCCCTTATGTCCTTTTAGAGAAACTCTCT 840
Query 811 ATACATTTTTTCGCAAATCTTAAAACCAAGGAAACTTTCCGTGACATTATCCTTCGAGCT 870
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 AAACCTTTTTTCGCAAATCTTAAAACCAAGGAAACTTTCCGTGACATTATCCTTCGAGCT 900
Query 871 TTCAGGTTAAAAGGAGAGGTCAAAGAAGGAATGAATTTCCGACATTTTACAGATTTGTTC 930
|| ||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 901 TTTAGGTTGAAAGGAGAGATCAAAGAAGGAACGAATTTCCGTCATTTTACAGATTTGTTC 960
Query 931 CGACGTGTCCTTGTGGAAACACTTTGTTTGACAAAAGAACAAATCAAAAGCGCAAAGGAT 990
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AGACGTGTCCGTGTGGAAACACTTTGTTTGACAAAAGAACAAATCAAAAGCGCAAAGGAT 1020
Query 991 AAGCCACCGGAGAGCATAAAGAGTCTGCACAACGCAGACAAACTAGACAGTGCTGGAGTG 1050
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 AAGCCACCGGAGATCATAAAGAGTCTGCACAACGCAGACAAACTAGACAGTGCTGGAGTG 1080
Query 1051 GATTTTGTGCCTCTGG-AAGaaaaaaaCAATTTATCGTTGGTGATTACTTTCGAACGGGG 1109
|||||||||| ||||| ||| ||||||| |||||||||||||||| ||||||||||| ||
Sbjct 1081 GATTTTGTGCGTCTGGAAAG-AAAAAACGATTTATCGTTGGTGATAACTTTCGAACGCGG 1139
Query 1110 AATCTTGGAAATACCTTGTTTCTTAGCGGACGACAACACCGAGAGGATTATGAGGAACTT 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 AATCTTGGAAATACCTTGTTTCTTAGCGGACGACAACACCGAGAGGATTATGAGGAACTT 1199
Query 1170 AATGGCCCTCGAACAATGTCATTACCCTCTCACTTCTTATGTTTGTAACTACATAGCCTT 1229
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 1200 AATGGCCCTCGAGCAATGTCATTACCCTCTCACTGCTTATGTTTGTAACTACATAGCTTT 1259
Query 1230 CTTGGATTTTCTCATCGACACCGACCAAGACGTTGACTTGCTCGTCAAGAAAGGAGTTAT 1289
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 CTTGGATTTTCTTATCGACACCGACCAAGACGTTGACTTGCTCGTCAAGAAAGGAGTTAT 1319
Query 1290 AAAGAACTGGTTAGGACATCAAGCATCGGTGGCGGAAATGGTGAACAAGCTGTGTTTAGG 1349
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1320 AAAGAACTGGTTAGGACATCAAGCATCGGTGGCGGAAATGGTAAACAAGCTGTGTTTAGG 1379
Query 1350 GCTTGTGGATTTTGGATCTCACTATTACGATATAGCCGATAGACTCAACAAACACTACGA 1409
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1380 GCTTGTGGATTTTGGATCTCACTATTACGGTATAGCCGATAGACTCAACAAACACTACGA 1439
Query 1410 GAGCCGTCGCAATAGATCCATCGCCACACTCCGGCGAGTTTACTTTAAAGACCTTTGGAC 1469
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1440 AAGCCGTCGCAATAGATCCATAGCCACACTCCGGCGAGTTTACTTTAAAGATCTTTGGAC 1499
Query 1470 CGGAACTGCCACCGTTGCCGCCGTCGTTATCCTCGTGTTGACTTTGATTGGGACTGTGGC 1529
||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || ||
Sbjct 1500 CGGAACTGCCACCATTGCCGCCGCCGTTATCCTCGTGTTGACTTTGATTGGGACGGTTGC 1559
Query 1530 TTCCGTTCTCCAAGTGACGCAGAAGGAAAAATAATTCTCCACCGCCTCCGTCTCTGTTCT 1589
|||||| ||||| |||||||||||||| || ||||||||||||||||||| || |||||
Sbjct 1560 TTCCGTACTCCAGGTGACGCAGAAGGATAA-TAATTCTCCACCGCCTCCGGCTATGTTCC 1618
Query 1590 GAGGACCATAGATTGTCTCTTGTTATACACGAAACAAAAACAATATTTGCTTCTTCtttt 1649
||||||| ||||||||||||||||||| |||||||||| ||||| ||| || || ||||
Sbjct 1619 GAGGACCGTAGATTGTCTCTTGTTATATACGAAACAAA--CAATAGTTG-TT-TT-TTTT 1673
Query 1650 tttttCTCTCATGCAAAACTATGTTTAATTTGTTTTTCTCTTTAGCTCGACTTGGTTCAA 1709
||| || | | |||||||||| |||||||||| ||||||||| |||| |
Sbjct 1674 -----CTC-CA---A----T--GTTTAATTTGGTTTTCTCTTT-GCTCGACTTTGTTCCA 1717
Query 1710 CAAATAATGTTTCTTTTTCATATTGT-TT-ATTTATTCCATCATGGCTAACGTCATCTTT 1767
||||||||| |||||||||||||| | || ||||| ||||||||||||||||||||||||
Sbjct 1718 CAAATAATGCTTCTTTTTCATATTTTCTTTATTTAGTCCATCATGGCTAACGTCATCTTT 1777
> AT2G28580.1 | Symbols: | Plant protein of unknown function (DUF247)
| chr2:12244859-12248450 FORWARD LENGTH=1817
Length=1817
Score = 1162 bits (629), Expect = 0.0
Identities = 1241/1529 (81%), Gaps = 72/1529 (5%)
Strand=Plus/Plus
Query 259 TCTGAGATTTCCGGTATATGGCCTTCTTCATTTAG--C-GAGTATTGTTGCATTTATAGA 315
||| ||||| ||||| | ||| ||||||| |||| | |||| ||||||||| ||||||
Sbjct 306 TCTAAGATTCCCGGTCTTTGGTCTTCTTCCGTTAGACCAGAGTTTTGTTGCATCTATAGA 365
Query 316 GTACCTA-ACCGGTTAAGGAGAGTGAACCCAGATGCATACACTCCTCAAATGCTTCTCAT 374
||||| | |||||||| | | ||||||||| || || ||||||||||||||||| || ||
Sbjct 366 GTACC-AGACCGGTTACGCAAAGTGAACCCCGAGGCTTACACTCCTCAAATGCTGCTAAT 424
Query 375 CGGTCCACTTCAACATTCTAAGAAAGCTCAAGCTCTTGAGCTCTCCAAAACCGATTCGAG 434
||| || ||||| ||||| ||||||||| |||| || ||| || ||||||||||| ||
Sbjct 425 CGGACCTCTTCACCATTCCAAGAAAGCTGAAGCCCTCAAGCGCTACAAAACCGATTTAAG 484
Query 435 ATATTTGGACTATATGAACATGGAACTTCACAAGGAGAAGTACCTTAAT-GCTATTGCAA 493
||||||| ||||| |||||||||| ||||||||| |||||| |||| || | |||||||
Sbjct 485 ATATTTGAACTATCTGAACATGGAGCTTCACAAGAAGAAGTGCCTTGATAG-TATTGCAG 543
Query 494 ATAAATATGGAGAACAAATTATCGAAGTTTTCAGGAAAATCATAAG-AACAAGTGAGAAA 552
||| |||||| || ||| | || ||| ||||||| |||||| | || || |||||||
Sbjct 544 ATATATATGGGGATCAACCTGTCAAAGAGTTCAGGAGAATCAT-CGAAATAAATGAGAAA 602
Query 553 TTTATAAGAGAAAGCTACGCCGAGTCAACGGA-GTGGATCAAAT-CCCAAGAGTTCGTGG 610
|| |||||||| ||||||||||||||||| | |||||| ||| | |||| ||||| |
Sbjct 603 TTCATAAGAGATAGCTACGCCGAGTCAAC-AATATGGATC-AATACTAAAGATTTCGTAG 660
Query 611 AAATGATCCTCCTCGACTCGGTGTTCATACTAGGGTTCTTTATTCAGACTGAAACTACTC 670
|||||||||||| ||||||||||||||||||| |||||| ||||| || | || ||| |
Sbjct 661 AAATGATCCTCCACGACTCGGTGTTCATACTATTGTTCTTCATTCAAACCGGAAGTACCC 720
Query 671 AAAACATCAAGAAGAAAGAAGCA-ATTCTTTTCCATGAAGAAGATATTCTTTTCCAGGAG 729
|||| |||| |||||||||| | |||||||| | || || | || | | || |
Sbjct 721 TAAACTTCAACAAGAAAGAAG-ATATTCTTTT-C---AACCAG--AGTCGTCT-CA-TAA 771
Query 730 CCTTGTCTCATAACCACTATTTTAGAAGACCTAATCTTGCTCGAGAACCAACTCCCTTAT 789
| | | | ||| | ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 772 AC--G---C-T-ACCGCCATTTTAGAAGATCTAATCTTGCTCGAGAACCAACTCCCTTAT 824
Query 790 GTCCTTTTAGAGGAACTCTCT-ATACATTTTTTCGCAAATCTTAAAACCAAGGAAAC-TT 847
| |||||||||| |||||| | | || ||||| | ||||| | || || |||||||| ||
Sbjct 825 GCCCTTTTAGAGAAACTCTTTGA-ACCTTTTTCCTCAAATGTCAATACTAAGGAAACGTT 883
Query 848 TCCGTGACATTATCCTTCGAGCTTTCAGGTTAAAAGGAGAGGTCAAAGAAGGAA-TGA-A 905
|| |||| |||| |||||||||||| ||||| | ||| || ||||||||| || ||| |
Sbjct 884 TC-GTGATATTACCCTTCGAGCTTTTAGGTTTGAGGGAAAGATCAAAGAAG-AAGTGAGA 941
Query 906 TTTCCGACATTTTACAGATTTGTTCCGACGTGTCCTTGTG-GAAACACTTTGTTTGACAA 964
|| || |||||||||||||||||| || |||||| ||| | | |||||| |||||||
Sbjct 942 TT-CCAACATTTTACAGATTTGTTTCGGTGTGTCCGTGTCAGCA-CACTTTCTTTGACAG 999
Query 965 AAGAACAAATCAAAAGCGCAAAGGATAAGCCACCGGAGAGCATAAAGAGTCTGCACAACG 1024
|||||||||| || | ||||| | |||||||| |||||| ||||| | || ||||||
Sbjct 1000 AAGAACAAATTAACATAGCAAAAAACGAGCCACCGAAGAGCAGAAAGATTATGTACAACG 1059
Query 1025 CAGACAAACTAGACAGTGCTGGAGTGGATTTTGTGCCTCTGGAAGaaaaaaaCAATTTAT 1084
||||||||||||||||||| |||||| |||||||| | |||| ||| |||| ||||||
Sbjct 1060 CAGACAAACTAGACAGTGCAGGAGTGAATTTTGTGAATGTGGATGAAGAAAATGATTTAT 1119
Query 1085 CGTTGGTGATTACTTTCGAACGG-GGAATCTTGGAAATACCTTGTTTCTTAGCGGACGAC 1143
||||||||||||||||| || | ||||||||| |||| ||||||||| || ||| |||
Sbjct 1120 CGTTGGTGATTACTTTCAAA-GACGGAATCTTGAAAATGCCTTGTTTCACAGTGGAAGAC 1178
Query 1144 AACACCGAGAGGATTATGAGGAACTTAATGGCCCTCGAACAATGTCATTACCCTCTCACT 1203
|||||||||||| | ||||||| |||||||| ||||| |||||||||||||||| |||
Sbjct 1179 AACACCGAGAGGGTCGTGAGGAATTTAATGGCACTCGAGCAATGTCATTACCCTCGAACT 1238
Query 1204 TCTTATGTTTGTAACTACATAGCCTTCTTGGATTTTCTCATCGACACCGACCAAGACGTT 1263
||| ||||||| ||||||| ||||||||||||| |||||| | ||||| |||||||||
Sbjct 1239 ACTTTTGTTTGTGACTACATCTCCTTCTTGGATTTCCTCATCAATACCGATCAAGACGTT 1298
Query 1264 GACTTGCTCGTCAAGAAAGGAGTTATAAAGAACTGGTTAGGACATCAAGCATCGGTGGCG 1323
|||||||||| |||||||||| || |||||||||||||||||||||||| ||| ||| |
Sbjct 1299 GACTTGCTCGCCAAGAAAGGAATTGTAAAGAACTGGTTAGGACATCAAGGATCAGTGACA 1358
Query 1324 GAAATGGTGAACAAGCTGTGTTTAGGGCTTGTGGATTTTGGATCTCACTATTA-CGATAT 1382
|||||||| |||||||| ||||||||||| |||||||| |||||||||||| | ||||||
Sbjct 1359 GAAATGGTAAACAAGCTATGTTTAGGGCTCGTGGATTTCGGATCTCACTAT-AGCGATAT 1417
Query 1383 AGCCGATAGAC-TCAACAAACACTACGAGAGCCGTCGCAATAGATCCATCGCCACACTCC 1441
|| ||| | || |||||||||||||||| | |||| ||| ||||| ||| ||| || |
Sbjct 1418 AGTCGAAA-ACCTCAACAAACACTACGACAATCGTCTCAACAGATCTGTCGGCACTCTTC 1476
Query 1442 GGCGAGTTTACTTT-AAAGACCTTTGGACCGGAACTGCCACCGTTGCCGCCGTCGTTATC 1500
|||||||||| ||| ||||| ||||||||||| ||||||||| ||||||| |||||| ||
Sbjct 1477 GGCGAGTTTA-TTTCAAAGATCTTTGGACCGGTACTGCCACCATTGCCGCAGTCGTTCTC 1535
Query 1501 CTCGTGTTGACTTTGATTGGGACTGTGGCTTCCGTTCTCCAAGTGACG---CAGAAGGAA 1557
|| ||||||||||| ||| ||||||||||||| |||||||||||| | ||||| ||
Sbjct 1536 CTTGTGTTGACTTTAATTCAGACTGTGGCTTCCATTCTCCAAGTGATGATGCAGAACGAC 1595
Query 1558 AAATAATTCTCCACCGCCTCC-GTCTCTGTTCTGAGGACCATAGATTGTCTCTTGTTATA 1616
|| ||| ||||| || ||||| | ||| || | | |||| ||||||||| ||||||||||
Sbjct 1596 AA-TAAGTCTCCGCCTCCTCCAG-CTCCGTCCCGGGGACTATAGATTGTTTCTTGTTATA 1653
Query 1617 CACGAAACAAAAACAATATTTGCTTCTTCtttttttttCTCTCATGCAAAACTATGTTTA 1676
||||||| ||| | ||||||| | ||| |||||| | | || ||||| ||||||||
Sbjct 1654 TACGAAACCAAA-CTATATTTG-T-CTT-TTTTTTC--C-CACA--CAAAATTATGTTTA 1704
Query 1677 ATTTGTTTTTCTCTTT-AGCTCGACTTGGTTCAACAAATAATGTTTCTTTTTCATATTGT 1735
| | |||||||||||| | ||||||| || || | ||||| |||||||||| ||||
Sbjct 1705 ACT-GTTTTTCTCTTTCAA-TCGACTTTGT--AA-A--TAATGCTTCTTTTTCACGTTGT 1757
Query 1736 TTATTTATTCCATCATGGCTAACGTCATC 1764
||| |||| ||| ||| |||| | |||||
Sbjct 1758 TTAGTTATCCCACCATAGCTA-CATCATC 1785
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87399148845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5