BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483649 Length=1615 Score E Sequences producing significant alignments: (Bits) Value AT2G45150.1 | Symbols: CDS4 | cytidinediphosphate diacylglycero... 1229 0.0 > AT2G45150.1 | Symbols: CDS4 | cytidinediphosphate diacylglycerol synthase 4 | chr2:18613305-18615717 FORWARD LENGTH=1760 Length=1760 Score = 1229 bits (665), Expect = 0.0 Identities = 778/831 (94%), Gaps = 13/831 (2%) Strand=Plus/Plus Query 24 AATGACACACACAAACACACTC-T-CTCCGACATGATGATGATTCAGAGATTTTGA-TTT 80 ||||||| | || ||||||||| | ||| ||||||||||||||||||||||||||| ||| Sbjct 97 AATGACAAATACGAACACACTCTTCCTCAGACATGATGATGATTCAGAGATTTTGATTTT 156 Query 81 TCAAGAAAACTCTCTTTTTCCTC-TGtt-ttttt-CC-C-T--ATCATTTTGAAAGCAAT 133 ||||||||||||| ||||||||| | || ||||| || | | ||||| || |||||| Sbjct 157 TCAAGAAAACTCTGTTTTTCCTCTTTTTGTTTTTGCCTCTTGGGGCATTTGGAGAGCAAT 216 Query 134 GGCGTCTTTTGCTGAACTTGTTTTATCGACTTCTCGCTGTACATGCCCTTGCCGTTCATT 193 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 217 GGCGACTTTTGCTGAACTTGTTTTATCGACTTCTCGCTGTACATGCCCTTGCCGTTCATT 276 Query 194 CTCTAAAAAACCCTTAATTCTTCCCCCTTTATCTGGTCTGCGTCTCGTCGGTGGTGATAC 253 | ||| ||||||| |||||| ||||||||||||||||||||||||| | |||||||| Sbjct 277 CACTAGAAAACCCCTAATTCGTCCCCCTTTATCTGGTCTGCGTCTC--C-CCGGTGATAC 333 Query 254 CAAACCATTGTTTCGTTCCGGCCTTGGTCCGATTTCCGTTAAACGGCGTTTCCTCACTGC 313 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| || Sbjct 334 CAAACCATTGTTTCGTTCCGGACTTGGTCGGATTTCTGTTAGCCGGCGTTTCCTCACGGC 393 Query 314 CGTTGCTCGAGCTGAATCAGACCAGCTTGGTGATGATGACAACTCAAAGGGAATTGATAG 373 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 394 CGTTGCTCGAGCTGAATCAGACCAGCTTGGTGATGATGACCACTCAAAGGGAATTGATAG 453 Query 374 AATCCATGACTTGCAAAATGTGGAAGATAAGCAGAAGAAAGCAAGCCAGCTTAAGAAAAG 433 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 454 AATCCATAACTTGCAGAATGTGGAAGATAAGCAGAAGAAAGCAAGCCAGCTTAAGAAAAG 513 Query 434 AGTGATCTTTGGTATTGGCATTGGATTACCTGTTGGATGTGTTGTGTTAGCTGGAGGATG 493 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 514 AGTGATCTTTGGTATTGGCATTGGTTTACCTGTTGGATGTGTTGTGTTAGCTGGAGGATG 573 Query 494 GGTTTTCACTGTAGCCTTAGCAGCTTCTGTTTTTATCGGTTCCCGCGAATATTTCGAGCT 553 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 574 GGTTTTCACTGTAGCTTTAGCATCTTCTGTTTTTATCGGTTCCCGCGAATATTTCGAGCT 633 Query 554 CGTTAGAAGTAGAGGCATAGCTAAAGGAATGACACCTCCTCCACGATATGTCTCTCGAGT 613 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 634 TGTTAGAAGTAGAGGCATAGCTAAAGGAATGACTCCTCCTCCACGATATGTATCTCGAGT 693 Query 614 TTGCTCAGTTATATGTGCCCTTATGCCCATACTTACACTGTACTTTGGTAACATTGATAT 673 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 694 TTGCTCGGTTATATGTGCCCTTATGCCCATACTTACACTGTACTTTGGTAACATTGATAT 753 Query 674 ATTGGTGACATCCGCAGCATTTCTTGTTGCAATAGCATTGTTAGTACAGAGGGGATCCCC 733 |||||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||| Sbjct 754 ATTGGTGACATCTGCAGCATTTGTTGTTGCAATAGCATTGTTAGTACAAAGAGGATCCCC 813 Query 734 ACGTTTTTCTCAGCTGAGTAGTACAATGTTTGGTCTATTTTACTGTGGTTATCTCCCTTG 793 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 814 ACGTTTTGCTCAGCTGAGTAGTACAATGTTTGGTCTGTTTTACTGTGGTTATCTCCCTTC 873 Query 794 TTTCTGGGTTAAGCTTCGCTGTGGTTTAGCTGCTCCTGCGCTTAACACTGG 844 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 874 TTTCTGGGTTAAGCTTCGCTGTGGTTTAGCTGCTCCTGCGCTTAACACTGG 924 Score = 931 bits (504), Expect = 0.0 Identities = 578/614 (94%), Gaps = 4/614 (1%) Strand=Plus/Plus Query 877 GTATTGGAAAGACATGGCCAATTCTTCTTGGTGGTCAAGCTCATTGGACAGTTGGACTTG 936 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 924 GTATCGGAAGGACATGGCCAATTCTTCTTGGTGGTCAAGCTCATTGGACAGTTGGACTTG 983 Query 937 TGGCAACATTGATTTCTTTTAGCGGTGTAATTGCGACGGACACATTTGCTTTTCTCGGTG 996 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 984 TGGCAACATTGATTTCTTTCAGCGGTGTAATTGCGACAGACACATTTGCTTTTCTCGGTG 1043 Query 997 GCAAGGCTTTTGGTAGGACACCTCTTACTAGTATTAGTCCCAAAAAGACATGGGAAGGGA 1056 | ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 1044 GAAAGACTTTTGGTAGGACACCTCTTACTAGTATTAGTCCCAAGAAGACATGGGAAGGAA 1103 Query 1057 CTTTTGTAGGACTTGTTGGTTGTATAGCCATTACCAT-TCTACTCTCTAAATCTCTTAGT 1115 || |||||||||||||||||||||||||||||||||| | |||||||||||| ||| ||| Sbjct 1104 CTATTGTAGGACTTGTTGGTTGTATAGCCATTACCATAT-TACTCTCTAAATATCTCAGT 1162 Query 1116 TGGCCTCAATCTCTGTTCAGCTCAATAGCTTTTGGGTTTCTTAACTTCTTTGGGTCAGTC 1175 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1163 TGGCCACAATCTCTGTTCAGCTCAGTAGCTTTTGGGTTTCTTAACTTCTTTGGGTCAGTC 1222 Query 1176 TTTGGTGATCTTACTGAATCAATGATCAAGCGTGATGCCGGCGTCAAAGACTCTGGTTCA 1235 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1223 TTTGGTGATCTTACTGAATCAATGATCAAGCGTGATGCTGGCGTCAAAGACTCTGGTTCA 1282 Query 1236 CTCATCCCAGGACACGGAGGAATATTAGATAGAGTTGATAGTTACATTTTCACCGGCGCA 1295 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1283 CTTATCCCAGGACACGGTGGAATATTAGATAGAGTTGATAGTTACATTTTCACCGGCGCA 1342 Query 1296 CTAGCTTATTCATTCATCAAAACATCCCTAAGACTTTATGGAGTTTGATGATCTACCGGA 1355 |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 1343 TTAGCTTATTCATTCATCAAAACATCCCTAAAACTTTACGGAGTTTGATGATCTACCGGA 1402 Query 1356 AATACCATAGCTTC-GGTAAACTTACAAGCATTTCCACGATAAAATCCGGCAATGTAGCT 1414 || |||||| ||| || |||||||||||||| |||| | ||| |||||||||||||||| Sbjct 1403 AAGACCATATCTTTAGG-AAACTTACAAGCATATCCATGGTAAGATCCGGCAATGTAGCT 1461 Query 1415 GTGAAACAAATGGTGCAGTGTTCACTGTTGTTGCCTTTGAAAGATGCAGAGGACTAGGAG 1474 ||||||||||||||||||||||| |||||| | |||||||||||||||||||| | | || Sbjct 1462 GTGAAACAAATGGTGCAGTGTTCTCTGTTGCTACCTTTGAAAGATGCAGAGGATTTGAAG 1521 Query 1475 GTGAAAGCAGAGCC 1488 |||||||||||||| Sbjct 1522 GTGAAAGCAGAGCC 1535 Score = 126 bits (68), Expect = 6e-28 Identities = 116/136 (85%), Gaps = 15/136 (11%) Strand=Plus/Plus Query 1489 GTTTGGTTTATGTTTG--ATAGTTGACCCAAAAGGGCAG----T-CT-TTT-GAGGTGCA 1539 |||||||||||||||| |||||||||||| |||||||| | || ||| | |||||| Sbjct 1594 GTTTGGTTTATGTTTGATATAGTTGACCCAGAAGGGCAGTCTTTACTCTTTAGGGGTGCA 1653 Query 1540 TAATTTGGTAGTCATACGAATTATTATTTTTAGATAAATTTTAAGCTTCTTAGGAACTCT 1599 |||||||||||| ||||| ||||||||||||||| ||||| | | |||||||||||| Sbjct 1654 TAATTTGGTAGTTATACGGATTATTATTTTTAGACAAATT--A---T-CTTAGGAACTCT 1707 Query 1600 TTATTCTTATGAAAAA 1615 |||||||||||||||| Sbjct 1708 TTATTCTTATGAAAAA 1723 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79768666005 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5