BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483660
Length=1083
Score E
Sequences producing significant alignments: (Bits) Value
AT2G45260.1 | Symbols: | Plant protein of unknown function (DU... 1757 0.0
AT4G34080.1 | Symbols: | Plant protein of unknown function (DU... 1740 0.0
AT4G33320.1 | Symbols: | Plant protein of unknown function (DU... 1293 0.0
AT4G36100.1 | Symbols: | Sec1/munc18-like (SM) proteins superf... 492 3e-138
AT4G34090.3 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 176 4e-43
AT2G45245.1 | Symbols: | other RNA | chr2:18659422-18660655 RE... 135 6e-31
> AT2G45260.1 | Symbols: | Plant protein of unknown function (DUF641)
| chr2:18664530-18666413 REVERSE LENGTH=1608
Length=1608
Score = 1757 bits (951), Expect = 0.0
Identities = 1040/1084 (96%), Gaps = 2/1084 (0%)
Strand=Plus/Plus
Query 1 GAAGAATCTATCAATCAGAATCCTGAAGCTATGGAAGCACTTATTTCCAATCTCTTTGGA 60
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 275 GAAGAGTCTATCAATCAGAATCCTGAAGCTATGGAAGCACTTATCTCCAATCTCTTCGGA 334
Query 61 AACATCTCCTCTTTGAAATCTGCTTATATCGAGCTTCAAAGTGCTCATACTCCTTACGAC 120
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 335 AACATCTCGTCTTTGAAATCTGCTTATATCGAGCTTCAAAGTGCTCATACTCCTTACGAT 394
Query 121 CCCGAGAAGATTCAGGCAGCGGATAAAGTTGTGATTTCTGAACTCAAGAATCTTTCGGAA 180
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct 395 CCCGAGAAGATTCAGGCAGCGGACAAAGTTGTCATTTCTGAACTCAAGAATCTTTCCGAA 454
Query 181 CTGAAGCATTTTTACAGAGAGAATAACCCCAAGCCTGTATGTGTCTCTCCACAAGACTCT 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 455 ATGAAGCATTTTTACAGAGAGAATAACCCCAAACCTGTATGTGTCTCTCCACAAGACTCT 514
Query 241 CGTTTAGCTGCAGAGATCCAAGAACAGCAGAGTTTGTTGAAGACTTATGAGGTCATGGTG 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 515 CGTTTAGCTGCAGAGATCCAAGAGCAGCAGAGTTTGTTGAAGACTTATGAGGTTATGGTG 574
Query 301 AAGAAGTTTCAGTCTGAGATTCAGAACAAGGATTCCGAGATCACGCAGATGCTGCAGAAG 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 575 AAGAAGTTTCAGTCTGAGATTCAGAACAAGGATTCTGAGATCACGCAGATGCTACAGAAG 634
Query 361 ATCGACGAAGCAAACCAGAAACGGCTTAAGCTTGAGAAGAATCTTAAGTTAAGGGGAATG 420
|| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 635 ATTGAGGAAGCAAACCAGAAACGGCTTAAGCTTGAGAAGAATCTTAAGTTAAGAGGAATG 694
Query 421 TCTACAAACGAAGGTTCTAATGGAGATGGCAATTTGCAATTTCCTGACTTAACTACTGAA 480
||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||
Sbjct 695 TCTACAAACGAAGGTTCTAATGGAGATGGAAATATGCAGTTTCCTGACTTAACTACTGAA 754
Query 481 CTCT-TCATATCTAGTTACGAAGCTGCTGCTAAAGCTGTGCACGATTTCTCCAAGCCGCT 539
|||| | |||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 755 CTCTAT-GTATCTACTTACGAAGCTGCTGCTAAAGCCGTGCACGATTTCTCCAAGCCGCT 813
Query 540 AATCAACATGATGAAAGCTGCAGGATGGGATCTTGATTCTGCAGCCAATTCCATTGAGCC 599
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 814 AATCAACATGATGAAAGCAGCAGGATGGGATCTTGATTCTGCAGCCAATTCTATTGAGCC 873
Query 600 TGACGTTGTTTACGCCAAGAGGCCTCACAAGAAATATGCATTTGAATCATACATATGCCA 659
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 874 TGATGTTGTTTACGCCAAGAGGCCTCACAAGAAATATGCATTTGAATCATACATATGCCA 933
Query 660 AAGGATGTTCAGTGGGTTTCAGCAGAAGAATTTCTCAGTAAACTCAGAGAGTGCAACGGT 719
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 934 AAGGATGTTCAGTGGGTTTCAGCAGAAGAACTTCTCAGTAAACTCAGAGAGTGCTGCGGT 993
Query 720 TATAGCCGATGATGACACAGACACCTTTTTCCGCCAGTTTCTTGCTCTGAAGGACATGGA 779
||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 994 TATGGCCAATGATGACACAGACACCTTTTTCCGCCAGTTTCTTGCTCTCAAGGACATGGA 1053
Query 780 TCCACTAGATGCTCTAGGTACAAACCCTGATTCCAACTTTGGCATATTCTGCAGGAGCAA 839
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1054 TCCACTAGATGCTCTAGGTACAAACCCTGATTCCAACTTTGGTATATTCTGCAGGAGCAA 1113
Query 840 GTATCTCATCTTGGTCCACCCAAAGATGGAAGCTTCTTTCTTTGGAAATCTAGACCAGCG 899
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1114 GTATCTCCTCTTGGTCCACCCAAAGATGGAAGCTTCTTTCTTTGGAAATCTAGATCAGCG 1173
Query 900 TGACTACGTAACAGGAGGTGGGCACCCGAGGACTACATTTTACCAGGCCTTCTTAAAACT 959
||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1174 TGACTACGTGACAGGAGGTGGGCACCCGAGGACTGCGTTTTACCAGGCCTTCTTAAAACT 1233
Query 960 TGCAAAGTCGGTATGGATCTTGCACAGGCTTGCATACTCGTTTGATCCAGCTGCTAAGAT 1019
|||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct 1234 TGCAAAGTCGATATGGATCTTGCACAGGCTTGCTTACTCTTTTGATCCAGCTGCAAAGAT 1293
Query 1020 CTTCCAAGTGAAAAAGGGTAGTGAGTTCTCTGATTCATACATGGAAAGTGTTGTGAAGAA 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1294 CTTCCAAGTGAAAAAGGGTAGTGAGTTCTCTGATTCATACATGGAAAGTGTTGTGAAGAA 1353
Query 1080 CATA 1083
||||
Sbjct 1354 CATA 1357
> AT4G34080.1 | Symbols: | Plant protein of unknown function (DUF641)
| chr4:16326955-16328043 FORWARD LENGTH=1089
Length=1089
Score = 1740 bits (942), Expect = 0.0
Identities = 1036/1083 (96%), Gaps = 0/1083 (0%)
Strand=Plus/Plus
Query 1 GAAGAATCTATCAATCAGAATCCTGAAGCTATGGAAGCACTTATTTCCAATCTCTTTGGA 60
||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1 GAAGAGTCTATCAATCAAAATCCTGAAGCTATGGAAGCACTTATCTCCAATCTCTTTGGA 60
Query 61 AACATCTCCTCTTTGAAATCTGCTTATATCGAGCTTCAAAGTGCTCATACTCCTTACGAC 120
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AACATCTCGTCTTTGAAATCTGCTTATATCGAGCTTCAAAGTGCTCATACTCCTTACGAT 120
Query 121 CCCGAGAAGATTCAGGCAGCGGATAAAGTTGTGATTTCTGAACTCAAGAATCTTTCGGAA 180
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct 121 CCCGAGAAGATTCAGGCAGCGGACAAAGTTGTCATTTCTGAACTCAAGAATCTTTCCGAA 180
Query 181 CTGAAGCATTTTTACAGAGAGAATAACCCCAAGCCTGTATGTGTCTCTCCACAAGACTCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 ATGAAGCATTTTTACAGAGAGAATAACCCCAAGCCTGTATGTGTCTCTCCACAAGACTCT 240
Query 241 CGTTTAGCTGCAGAGATCCAAGAACAGCAGAGTTTGTTGAAGACTTATGAGGTCATGGTG 300
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 241 CGTTTAGCTGCAGAGATTCAAGAGCAGCAGAGTTTGTTGAAGACTTATGAGGTCATGGTG 300
Query 301 AAGAAGTTTCAGTCTGAGATTCAGAACAAGGATTCCGAGATCACGCAGATGCTGCAGAAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 AAGAAGTTTCAGTCTGAGATTCAGAACAAGGATTCCGAGATCACGCAGATGCTGCAGAAG 360
Query 361 ATCGACGAAGCAAACCAGAAACGGCTTAAGCTTGAGAAGAATCTTAAGTTAAGGGGAATG 420
|| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 361 ATTGAGGAAGCAAACCAGAAACGGCTTAAGCTTGAGAAGAATCTTAAGTTAAGAGGAATG 420
Query 421 TCTACAAACGAAGGTTCTAATGGAGATGGCAATTTGCAATTTCCTGACTTAACTACTGAA 480
||||||||| |||||||| ||||||||| ||||| || ||||||||||| |||||||||
Sbjct 421 TCTACAAACCAAGGTTCTGGTGGAGATGGAAATTTACAGTTTCCTGACTTGACTACTGAA 480
Query 481 CTCTTCATATCTAGTTACGAAGCTGCTGCTAAAGCTGTGCACGATTTCTCCAAGCCGCTA 540
||||| |||||| |||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 481 CTCTTTGTATCTACTTACGAAGCTGCTGCTAAAGTTGTGCATGATTTCTCCAAGCCGCTA 540
Query 541 ATCAACATGATGAAAGCTGCAGGATGGGATCTTGATTCTGCAGCCAATTCCATTGAGCCT 600
||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||
Sbjct 541 ATCAACATGATGAAAGCAGCAGGATGGGATCTTGATACTGCAGCCAATTCTATTGAGCCT 600
Query 601 GACGTTGTTTACGCCAAGAGGCCTCACAAGAAATATGCATTTGAATCATACATATGCCAA 660
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 601 GATGTTGTTTACGCCAAGAGGCCTCACAAGGAATATGCATTTGAATCATACATATGCCAA 660
Query 661 AGGATGTTCAGTGGGTTTCAGCAGAAGAATTTCTCAGTAAACTCAGAGAGTGCAACGGTT 720
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 661 AGGATGTTCAGTGGGTTTCAGCAGAAGAACTTCTCAGTAAACTCAGAGAGTGCTACGGTT 720
Query 721 ATAGCCGATGATGACACAGACACCTTTTTCCGCCAGTTTCTTGCTCTGAAGGACATGGAT 780
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 721 ATGGCCGATGATGACACAGACACCTTTTTCCGCCAGTTTCTTGCTCTCAAGGACATGGAT 780
Query 781 CCACTAGATGCTCTAGGTACAAACCCTGATTCCAACTTTGGCATATTCTGCAGGAGCAAG 840
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 781 CCACTAGATGCTCTAGGTACAAACCCTGATTCCAACTTTGGTATATTCTGCAGGAGCAAG 840
Query 841 TATCTCATCTTGGTCCACCCAAAGATGGAAGCTTCTTTCTTTGGAAATCTAGACCAGCGT 900
|| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TAGCTCCTCTTAGTCCACCCAAAGATGGAAGCTTCTTTCTTTGGAAATCTAGACCAGCGT 900
Query 901 GACTACGTAACAGGAGGTGGGCACCCGAGGACTACATTTTACCAGGCCTTCTTAAAACTT 960
|||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 901 GACTACGTGACAGGAGGTGGCCACCCGAGGACTGCATTTTACCAGGCCTTCTTAAAACTT 960
Query 961 GCAAAGTCGGTATGGATCTTGCACAGGCTTGCATACTCGTTTGATCCAGCTGCTAAGATC 1020
||||||||| ||||||||||||||| |||||| ||||| |||||||||||||| ||||||
Sbjct 961 GCAAAGTCGATATGGATCTTGCACAAGCTTGCTTACTCTTTTGATCCAGCTGCAAAGATC 1020
Query 1021 TTCCAAGTGAAAAAGGGTAGTGAGTTCTCTGATTCATACATGGAAAGTGTTGTGAAGAAC 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 TTCCAAGTGAAAAAGGGTAGTGAGTTCTCTGATTCATACATGGAAAGTGTTGTGAAGAAC 1080
Query 1081 ATA 1083
|||
Sbjct 1081 ATA 1083
> AT4G33320.1 | Symbols: | Plant protein of unknown function (DUF641)
| chr4:16057038-16057916 REVERSE LENGTH=879
Length=879
Score = 1293 bits (700), Expect = 0.0
Identities = 780/819 (95%), Gaps = 3/819 (0%)
Strand=Plus/Plus
Query 1 GAAGAATCTATCAATCAGAATCCTGAAGCTATGGAAGCACTTATTTCCAATCTCTTTGGA 60
||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 4 GAAGAGTCTATCAATCAGAATCATGAAGCTATGGAAGCACTTATCTCCAATCTCTTTGGA 63
Query 61 AACATCTCCTCTTTGAAATCTGCTTATATCGAGCTTCAAAGTGCTCATACTCCTTACGAC 120
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 AACATCTCGTCTTTGAAATCTGCTTATATCGAGCTTCAAAGTGCTCATACTCCTTACGAT 123
Query 121 CCCGAGAAGATTCAGGCAGCGGATAAAGTTGTGATTTCTGAACTCAAGAATCTTTCGGAA 180
||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||
Sbjct 124 CCCGAGAAGATTCAGGCAGCGGACAAAGTTGTCAATTCTGAACTCAAGAATCTTTCCGAA 183
Query 181 CTGAAGCATTTTTACAGAGAGAATAACCCCAAGCCTGTATGTGTCTCTCCACAAGACTCT 240
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 ATGAAGCATTCTTACAGAGAGAATAACCCCAAGCCTGTATGTGTCTCTCCACAAGACTCT 243
Query 241 CGTTTAGCTGCAGAGATCCAAGAACAGCAGAGTTTGTTGAAGAC---TTATGAGGTCATG 297
||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||
Sbjct 244 CGTTTAGCTGCAGAGATTCAAGAGCAGCAGAGTTTGTTGAAGACTTATTATGAGGTCATG 303
Query 298 GTGAAGAAGTTTCAGTCTGAGATTCAGAACAAGGATTCCGAGATCACGCAGATGCTGCAG 357
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 304 GTGAAGAAGTTTCAGTCTGAGATTCAGAACAAGGATTCTGAGATCACGCAGATGCTGCAG 363
Query 358 AAGATCGACGAAGCAAACCAGAAACGGCTTAAGCTTGAGAAGAATCTTAAGTTAAGGGGA 417
||||| || ||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 364 AAGATTGAGGAAGCAAACAAGAAACGGCTTAAGCTTGAGAAGAATCTTAAGTTAAGAGGA 423
Query 418 ATGTCTACAAACGAAGGTTCTAATGGAGATGGCAATTTGCAATTTCCTGACTTAACTACT 477
||||||||||||||||||||| ||||||||| ||||| || ||||||||||| ||||||
Sbjct 424 ATGTCTACAAACGAAGGTTCTGGTGGAGATGGAAATTTACAGTTTCCTGACTTGACTACT 483
Query 478 GAACTCTTCATATCTAGTTACGAAGCTGCTGCTAAAGCTGTGCACGATTTCTCCAAGCCG 537
|||||||| |||||| |||||||| |||||||||||||||||| |||||||||||||||
Sbjct 484 GAACTCTTTGTATCTACTTACGAAGTTGCTGCTAAAGCTGTGCATGATTTCTCCAAGCCG 543
Query 538 CTAATCAACATGATGAAAGCTGCAGGATGGGATCTTGATTCTGCAGCCAATTCCATTGAG 597
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 544 CTAATCAACATGATGAAAGCAGCAGGATGGGATCTTGATTCTGCAGCCAATTCTATTGAG 603
Query 598 CCTGACGTTGTTTACGCCAAGAGGCCTCACAAGAAATATGCATTTGAATCATACATATGC 657
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 CCTGATGTTGTTTACGCCAAGAGGCCTCACAAGAAATATGCATTTGAATCATACATATGC 663
Query 658 CAAAGGATGTTCAGTGGGTTTCAGCAGAAGAATTTCTCAGTAAACTCAGAGAGTGCAACG 717
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 664 CAAAGGATGTTCAGTGGGTTTCAGCAGAAGAACTTCTCAGTAAACTCAGAGAGTGCTACG 723
Query 718 GTTATAGCCGATGATGACACAGACACCTTTTTCCGCCAGTTTCTTGCTCTGAAGGACATG 777
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 724 GTTATGGCCGATGATGACACAGACACCTTTTTCCGCCAGTTTCTTGCTCTCAAGGACATG 783
Query 778 GATCCACTAGATGCTCTAGGTACAAACCCTGATTCCAAC 816
|||||||||||||||||||||||||||||||||||||||
Sbjct 784 GATCCACTAGATGCTCTAGGTACAAACCCTGATTCCAAC 822
> AT4G36100.1 | Symbols: | Sec1/munc18-like (SM) proteins superfamily
| chr4:17082579-17083343 FORWARD LENGTH=711
Length=711
Score = 492 bits (266), Expect = 3e-138
Identities = 293/306 (96%), Gaps = 1/306 (0%)
Strand=Plus/Plus
Query 1 GAAGAATCTATCAATCAGAATCCTGAAGCTATGGAAGCACTTATTTCCAATCTCTTTGGA 60
||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 4 GAAGAGTCTATCAATCAAAATCCTGAAGCTATGGAAGCACTTATCTCCAATCTCTTTGGA 63
Query 61 AACATCTCCTCTTTGAAATCTGCTTATATCGAGCTTCAAAGTGCTCATACTCCTTACGAC 120
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 AACATCTCGTCCTTGAAATCTGCTTATATCGAGCTTCAAAGTGCTCATACTCCTTACGAT 123
Query 121 CCCGAGAAGATTCAGGCAGCGGATAAAGTTGTGATTTCTGAACTCAAGAATCTTTCGGAA 180
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct 124 CCCGAGAAGATTCAGGCAGCGGACAAAGTTGTCATTTCTGAACTCAAGAATCTTTCCGAA 183
Query 181 CTGAAGCATTTTTACAGAGAGAATAACCCCAAGCCTGTATGTGTCTCTCCACAAGACTCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 ATGAAGCATTTTTACAGAGAGAATAACCCCAAGCCTGTATGTGTCTCTCCACAAGACTCT 243
Query 241 CGTTTAGCTGCAGAGATCCAAGAACAGCAGAGTTTGTTGAAGACTTATGAGGTCATGGTG 300
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 244 CGTTTAGCTGCAGAGATTCAAGAGCAGCAGAGTTTGTTGAAGACTTATGAGGTCATGGTG 303
Query 301 AAGAAG 306
|| |||
Sbjct 304 AA-AAG 308
> AT4G34090.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G23370.1). | chr4:16327931-16330215
REVERSE LENGTH=1398
Length=1398
Score = 176 bits (95), Expect = 4e-43
Identities = 103/107 (96%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 977 TCTTGCACAGGCTTGCATACTCGTTTGATCCAGCTGCTAAGATCTTCCAAGTGAAAAAGG 1036
||||||||| |||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1398 TCTTGCACAAGCTTGCTTACTCTTTTGATCCAGCTGCAAAGATCTTCCAAGTGAAAAAGG 1339
Query 1037 GTAGTGAGTTCTCTGATTCATACATGGAAAGTGTTGTGAAGAACATA 1083
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1338 GTAGTGAGTTCTCTGATTCATACATGGAAAGTGTTGTGAAGAACATA 1292
> AT2G45245.1 | Symbols: | other RNA | chr2:18659422-18660655
REVERSE LENGTH=386
Length=386
Score = 135 bits (73), Expect = 6e-31
Identities = 75/76 (99%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 1008 AGCTGCTAAGATCTTCCAAGTGAAAAAGGGTAGTGAGTTCTCTGATTCATACATGGAAAG 1067
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 246 AGCTGCAAAGATCTTCCAAGTGAAAAAGGGTAGTGAGTTCTCTGATTCATACATGGAAAG 305
Query 1068 TGTTGTGAAGAACATA 1083
||||||||||||||||
Sbjct 306 TGTTGTGAAGAACATA 321
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53061976065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5