BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483675
Length=1207
Score E
Sequences producing significant alignments: (Bits) Value
AT2G45400.1 | Symbols: BEN1 | NAD(P)-binding Rossmann-fold supe... 1762 0.0
> AT2G45400.1 | Symbols: BEN1 | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:18703829-18706266 REVERSE LENGTH=1257
Length=1257
Score = 1762 bits (954), Expect = 0.0
Identities = 1129/1209 (93%), Gaps = 30/1209 (2%)
Strand=Plus/Plus
Query 1 ACCagaagagagagagagagagagagag-aaatggtgagagaag---aagaagaagatg- 55
||||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||||
Sbjct 1 ACCAGAAGAGAGAGAAAGAGACAGAGAGAAAATGGTGAGAGAAGAACAAGAAGAAGATGA 60
Query 56 -----acaacaac--gga-ggaggaggagagagaaagCTGCTTGTGGCTGATGAAACGAT 107
|||||||| | ||||||||||||||||||||||||||||||||||||||| |
Sbjct 61 CAACAACAACAACAACAACGGAGGAGGAGAGAGAAAGCTGCTTGTGGCTGATGAAACGGT 120
Query 108 GCCGTCTTTGTTGGACGGAACGGGGTTGGTTTGTGTAACGGGAGGTACTGGTTTCGTTGC 167
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 121 GCCGTCTTTGTTGGACGAAACGGGGTTGGTTTGTGTAACGGGAGGTTCTGGTTTCGTTGC 180
Query 168 TTCTTGGCTCATCATGCGTCTCCTTCAACGTGGCTACTCCGTTCGAGCCACGGTTCGAAC 227
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 181 TTCTTGGCTCATCATGCGTCTCCTTCAACGTGGCTACTCCGTTCGGGCCACGGTTCGAAC 240
Query 228 CAATC-CAGAAGGGAATAAGAAAGATATAAGCTACCTAACCGAACTACCATTTGCATCGG 286
||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 241 CAA-CTCAGAAGGGAATAAGAAAGATATAAGCTACCTAACCGAGCTACCATTTGCATCGG 299
Query 287 AGAGGCTTCAAATATTCACCGCCGATCTCAACGAACCGGAGAGCTTTAAACCGGCAATCG 346
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 300 AGAGGCTTCAAATATTCACCGCCGATCTCAACGAACCGGAGAGCTTCAAACCGGCAATCG 359
Query 347 AAGGATGCAAAGCCGTATTCCACGTGGCACATCCTATGGACCCAAACAGCAACGAAACCG 406
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 360 AAGGATGCAAAGCCGTATTCCACGTGGCACATCCTATGGACCCAAACAGCAACGAAACAG 419
Query 407 AAGAGACCGTTACGAAACGCACCGTGCAAGGTCTCATGGGGATACTAAAGTCGTGTTTGG 466
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 420 AAGAGACCGTTACGAAACGTACTGTGCAAGGTCTCATGGGGATACTAAAGTCGTGTTTGG 479
Query 467 ACGCTAAAACCGTGAAACGTTTTTTCTACACGTCAAGCGCCGTTACCGTTTTCTATAGCG 526
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 480 ACGCTAAAACCGTGAAACGTTTTTTCTACACGTCAAGCGCCGTGACTGTTTTCTATAGCG 539
Query 527 G-GAAAAACGGCGGTGGAGGAGGAGAAGTAGACGAGAGCGTTTGGAGCGACGTGGAGGTG 585
| | |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 540 GTG-GAAACGGCGGTGGAGGAGGCGAAGTAGACGAGAGCGTTTGGAGCGACGTCGAGGTG 598
Query 586 TTTAGGAATCAAAAGGAGAAGAGAGTGAGTAGCTCTTACGTCGTGTCGAAAATGGCGGCG 645
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 599 TTTAGGAATCAAAAGGAGAAGAGGGTGAGTAGCTCTTACGTCGTGTCGAAAATGGCGGCG 658
Query 646 GAGACGGCGGCACTTGAGTTCGGCGGGAAGAATGGATTGGAGGTTGTGACGCTCGTTATT 705
||||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 659 GAGACGGCGGCGCTTGAGTTCGGTGGGAAGAATGGGTTAGAGGTTGTGACGCTCGTTATT 718
Query 706 CCTCTTGTCGTCGGACCTTTTATATCTCCGTCGTTGCCTTCCTCCGTCTTCATATCTCTC 765
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 719 CCTCTCGTCGTCGGACCTTTTATATCTTCGTCGTTGCCTTCCTCCGTCTTCATATCTCTC 778
Query 766 GCCATGCTCTTTGGAAATTACAAAGAGAAGTATTTATTCGATACTTACAACATGGTGCAT 825
||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||||||
Sbjct 779 GCCATGCTCTTTGGAAATTACAAGGAGAAGTATTTGTTTGATACTTACAATATGGTGCAT 838
Query 826 ATTGATGATGTGGCGAGGGCGATGATATTACTATTAGAAAAGCCAGTAGCGAAAGGTAGA 885
|||||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||
Sbjct 839 ATTGATGATGTGGCAAGGGCGATGATATTTCTATTAGAAAAGCCAGTTGCAAAAGGTAGA 898
Query 886 TATATTTGTTCGTCGGTGGAGATGAAGATCGATGAGGTCTTTGAGTTTTTGTCTACGAAA 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 TATATTTGTTCGTCGGTGGAGATGAAGATCGATGAGGTCTTTGAGTTTTTGTCTACGAAA 958
Query 946 TTTCCTCAGTTTCAGCTACCTTCAATTGATTTGAAGAATTACAAAGTAGAGAAGAGGATG 1005
|||||||||||||||||||||||||| |||||||| || || ||||||||||||||||||
Sbjct 959 TTTCCTCAGTTTCAGCTACCTTCAATAGATTTGAATAAATATAAAGTAGAGAAGAGGATG 1018
Query 1006 AGTCTCTCGTCGAAGAAGCTGAGAAGTGAAGGGTTCGAGTTCAAGTATGGAGCTGAGGAA 1065
|||| || ||||||||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct 1019 GGTCTTTCATCGAAGAAGCTGAAAAGTGCCGGGTTCGAATTCAAGTATGGAGCCGAGGAA 1078
Query 1066 ATATTCGGTGGAGCTATAAGGAGCTGCCAAGCGAGGGGATTTCTTTAAATTCT---G--- 1119
|||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct 1079 ATATTCAGTGGAGCTATAAGGAGCTGTCAAGCAAGGGGATTTCTTTAAATTCTTATGGGA 1138
Query 1120 T----GT-T-AAAATTTGTATATGAATTGAAAATATCTTTTT-CTTTATTGGCCATTCCC 1172
| || | |||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 1139 TTTTTGTGTTAAAATTTGTATATGAATTGAAAATATGTTTTTTCTTTATTGGCCATTTCC 1198
Query 1173 GTTTTGTaa 1181
|||||||||
Sbjct 1199 GTTTTGTAA 1207
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59286843645
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5