BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483697
Length=975
Score E
Sequences producing significant alignments: (Bits) Value
AT2G45610.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1507 0.0
> AT2G45610.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:18791463-18792586 FORWARD LENGTH=1124
Length=1124
Score = 1507 bits (816), Expect = 0.0
Identities = 923/976 (95%), Gaps = 2/976 (0%)
Strand=Plus/Plus
Query 1 ATGTCACGTGACTCTCGTCCCGCGTTTGATCCATACAAACACCTCAACATAACAATCAAC 60
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCACGTGACTCTCCTCCCGCATTTGATCCATACAAACACCTCAACATAACAATCAAC 60
Query 61 CCCAACGGTTCTTGCACGCGCCACTTCATTTGGCCGATGGTTGATCCCGACCCGGATCCA 120
|||||||| |||||||||||||| ||| ||||||||| |||||| |||||||||||||||
Sbjct 61 CCCAACGGCTCTTGCACGCGCCATTTCGTTTGGCCGAGGGTTGAACCCGACCCGGATCCA 120
Query 121 TGCCCTGGCAAGCTCGCCGCTTCCAAAGACGTAACCATTAACCACGAAACCGGCGTGTCC 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TGCCCCGGCAAGCTCGCCGCTTCCAAAGACGTAACCATTAACCACGAAACCGGCGTGTCC 180
Query 181 GTACGTATTTTCCGACCAACTAATCTACCATCCAACGATAACGCCGTCGCTCGTCTCCCA 240
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 181 GTACGTATTTTCCGACCAACTAATCTACCATCCAATGATAACGCCGTGGCTCGTCTCCCA 240
Query 241 ATTATCATCCATCTCCACGGCTCCGGTTGGATCCTTTACCCAGCCAATTCCGTTGCGAAC 300
|| |||||||||||||||||||||||||||||||||||||| |||||||| | || ||
Sbjct 241 ATCATCATCCATCTCCACGGCTCCGGTTGGATCCTTTACCCGGCCAATTCTGCCGCAAAT 300
Query 301 AACCGTTGCTGCTCTCAAATGGCCAGTGAGTTAACGGTGATTGTTGTCTCCGTACACTAC 360
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 301 GACCGTTGTTGCTCTCAAATGGCCAGTGAGTTAACAGTGATTGTTGTCTCCGTACACTAT 360
Query 361 CGTTTACCTCCTGAACATAGACTCCCAGCTCAATACGACGACGCATTAGACGCTCTGCTT 420
||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 361 CGTTTGCCTCCGGAGCATAGACTCCCAGCTCAATACGACGACGCATTAGATGCTCTGCTT 420
Query 421 TGGGTCAAACAGCAAGTCGTTGACTCAACTAACGGCGAGCCTTGGCTTAGAG-ACTACGC 479
||||||||||| ||||||||||||||||| ||||||||||| ||||||| || |||||||
Sbjct 421 TGGGTCAAACAACAAGTCGTTGACTCAACCAACGGCGAGCCGTGGCTTA-AGGACTACGC 479
Query 480 CGATTTCTCACGGTGTTATATCTGCGGTTCGAGTAACGGCGCTAACATCGCTTTCCAATT 539
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 480 CGATTTCTCACGGTGTTACATATGCGGTTCGAGTAACGGCGCTAACATCGCTTTCCAATT 539
Query 540 GGCACTGAGATCGTTAGACCACGATTTGACGCCGTTAAAAATTGACGGTTGCGTGTTTTA 599
||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||
Sbjct 540 GGCACTGAGATCGTTAGACCACGATTTAACGCCGTTACAAATCGACGGTTGCGTGTTTTA 599
Query 600 CCAACCGCTTTTTGGCGGTAAAACGAGGACGAAATCGGAGCTCAAGAATTTCGCCGATCC 659
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 600 CCAACCGCTTTTTGGCGGTAAAACGAGGACAAAATCGGAGCTTAAGAATTTCGCCGACCC 659
Query 660 GGTGATGCCGGTGCCGGCTGTTGACGCCATGTGGGAACTATCTTTGCCGGTAGGTGTTGA 719
||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GGTAATGCCGGTTCCTGCGGTTGACGCCATGTGGGAACTATCTTTGCCGGTAGGTGTTGA 719
Query 720 TCGGGATCATAGGTATTGTAATCCGTTGGGTTATTTGCCGCAAAAAGAGAAAGTTGGACG 779
||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 720 TCGGGATCATAGGTACTGTAATCCATTGGGTTACTTGCCGCAAAAGGAGAAAGTTGGACG 779
Query 780 ACTTGGACGGTGTTTAGTGATCGGTTACGGCGGAGACACGTCGTTGGATCGACAACAAGA 839
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 GCTTGGACGGTGTTTGGTGATCGGTTACGGCGGAGACACGTCGTTGGATCGACAACAAGA 839
Query 840 TTTCGTGAATTTGTTGGTTGCGGCTGGAGTTAGGGTTGAAGCAAGGTTTGACGACGCCGG 899
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 840 TTTCGTGAATTTGTTGGTTGCAGCTGGAGTTAGGGTTGAAGCAAGGTTTGACGACGCCGG 899
Query 900 TTTCCATAGCATCGAGCTCGTCGATCCACGGCGAGCCGTCGCTCTTCTTAATATGATCAG 959
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||
Sbjct 900 TTTCCATAGCATCGAGCTGGTCGATCCACGACGAGCCGTCGCTCTTCTTAATATGATTAG 959
Query 960 AGATTTTATCAGTTGA 975
||||||||| ||||||
Sbjct 960 AGATTTTATAAGTTGA 975
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47722439650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5