BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483713
Length=1975
Score E
Sequences producing significant alignments: (Bits) Value
AT2G45750.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 3195 0.0
> AT2G45750.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr2:18842539-18845467
FORWARD LENGTH=2136
Length=2136
Score = 3195 bits (1730), Expect = 0.0
Identities = 1886/1962 (96%), Gaps = 8/1962 (0%)
Strand=Plus/Plus
Query 1 TTGATTGAtttttttttCTTTAAGAGATGAATTTATTTACAAGGATATCATCTCGGACTA 60
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 91 TTGATTGATTTTTTTTTCTTTAAGAGATGAATTTATTTACAAGAATCTCATCTCGGACTA 150
Query 61 AGAAGTCCAATCTTTACTACGTAACCCTAGTTGCGCTTCTCTGCATCGGTAGCTACCTTC 120
||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 151 AGAAGGCCAATCTTTACTACGTAACCCTAGTTGCTCTTCTCTGCATCGCTAGCTACCTTC 210
Query 121 TCGGTATTTGGCAAAACACGGCGGTGAATCCACGCGCCGCCTTCGATGATTCAGACGGTA 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 211 TCGGTATTTGGCAAAACACGGCGGTTAATCCACGCGCCGCCTTCGATGATTCAGACGGTA 270
Query 181 CACCGTGCGAGCAATTCACCAGACCGGATTCGACGAAAGATCTCGACTTCGACGCGCATC 240
||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 271 CACCGTGCGAGGGATTCACCAGACCTAATTCTACGAAAGATCTCGACTTCGACGCGCATC 330
Query 241 ACAACATTCAAGATCCACCTCCGGTGACGGAAACCGCCGTTAATTTCCCGTCGTGCGGCG 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||
Sbjct 331 ACAACATTCAAGATCCACCTCCGGTGACGGAAACCGCCGTTAGTTTCCCGTCGTGTGCCG 390
Query 301 CCGAGTTGAGCGAGCACACGCCGTGCGAAGACGCGAAGCGATCGCTGAAATTCTCGAGGG 360
||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 391 CCGCGTTGAGCGAGCACACGCCATGCGAAGACGCGAAGCGATCGTTGAAATTCTCGAGGG 450
Query 361 AGAGATTGGAGTATAGGCAAAGGCATTGTCCCGAGAGAGAAGAAATCTTGAAGTGCAGAA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 451 AGAGATTGGAGTATAGGCAAAGGCATTGTCCCGAGAGAGAAGAAATCTTGAAGTGCAGAA 510
Query 421 TCCCGGCGCCGTACGGTTACAAAACGCCGTTCCGGTGGCCGGAGAGTCGTGACGTGGCGT 480
| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 511 TTCCGGCGCCGTACGGTTACAAAACGCCGTTCCGATGGCCGGCGAGTCGTGACGTGGCGT 570
Query 481 GGTTCGCTAATGTGCCTCACACGGAACTTACGGTTGAGAAAAAGAATCAGAATTGGGTCC 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 571 GGTTCGCTAATGTGCCTCACACGGAGCTTACGGTTGAGAAAAAGAATCAGAATTGGGTCC 630
Query 541 GGTACGAGAATGATCGGTTTTGGTTCCCTGGTGGCGGTACGATGTTTCCACGTGGCGCTG 600
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 631 GGTACGAGAATGATCGGTTTTGGTTCCCTGGTGGAGGTACGATGTTTCCACGTGGCGCTG 690
Query 601 ATGCTTACATTGACGATATCGGACGGTTGATTGATCTCAGCGACGGCTCTATCCGTACAG 660
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 691 ATGCTTACATTGATGATATCGGACGGTTGATTGATCTCAGCGACGGCTCTATCCGTACAG 750
Query 661 CCATCGATACCGGTTGCGGGGTGGCTAGCTTCGGTGCATATCTTTTATCAAGAAACATTA 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 CCATCGATACCGGTTGCGGGGTGGCTAGCTTCGGTGCATATCTTTTATCAAGAAACATTA 810
Query 721 CAACGATGTCATTTGCACCAAGGGACACACACGAGGCTCAGGTCCAGTTTGCACTCGAGC 780
|||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||
Sbjct 811 CAACGATGTCATTTGCACCAAGAGACACACACGAAGCTCAAGTCCAGTTCGCACTCGAGC 870
Query 781 GTGGCGTGCCTGCGATGATCGGAATCATGGCTACAATCCGCTTACCGTACCCTTCTAGAG 840
|||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 871 GTGGTGTGCCGGCGATGATCGGAATCATGGCTACAATCCGCCTACCGTACCCTTCTAGAG 930
Query 841 CCTTTGACTTAGCACATTGCTCTCGTTGCCTTATCCCGTGGGGCCAAAACGATGGGGCTT 900
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 931 CCTTTGATTTAGCACATTGCTCTCGTTGCCTTATTCCGTGGGGCCAAAACGATGGGGCTT 990
Query 901 ACTTGATGGAGGTGGATAGGGTTTTAAGACCAGGAGGGTATTGGATACTTTCTGGACCGC 960
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 991 ACTTGATGGAGGTGGATAGGGTTTTAAGACCAGGAGGGTACTGGATACTTTCTGGACCGC 1050
Query 961 CGATAAATTGGCAGAAACGGTGGAA-GGGATGGGAGCGGACGATGGATGATCTGAATGCA 1019
|||| |||||||||||||||||||| ||| ||||| ||||| ||||||||| ||||||||
Sbjct 1051 CGATTAATTGGCAGAAACGGTGGAAAGGG-TGGGAACGGACCATGGATGATTTGAATGCA 1109
Query 1020 GAGCAGACTCAGATCGAGCAGGTCGCGAGAAGCTTGTGTTGGAAGAAAGTTGTGCAGAGA 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1110 GAGCAGACTCAGATCGAGCAGGTCGCGAGAAGCTTGTGTTGGAAGAAAGTTGTTCAAAGA 1169
Query 1080 GATGATCTTGCTATTTGGCAAAAACCCTTTAACCACATTCACTGTAAGAAAACCAGACAG 1139
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1170 GATGATCTTGCTATTTGGCAAAAACCCTTTAACCACATTGACTGTAAGAAAACCAGAGAG 1229
Query 1140 GTTTTGAAGAATCCGGAGTTTTGTCGTCATGATCAAGATCCCGACATGGCCTGGTATACG 1199
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1230 GTTTTGAAAAATCCGGAGTTTTGTCGTCATGATCAAGATCCCGACATGGCCTGGTATACG 1289
Query 1200 AAGATGGATTCTTGTTTGACACCATTACCTGAAGTTGATGACGCGGAGGATCTAAAGACG 1259
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1290 AAGATGGATTCTTGTTTGACACCATTACCTGAAGTTGATGACGCTGAGGATCTAAAGACG 1349
Query 1260 GTGGCCGGAGGGAAGGTAGAGAAGTGGCCGGCTAGGTTAAACGCGGTTCCTCCGAGAGTA 1319
|||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||
Sbjct 1350 GTGGCCGGAGGGAAGGTAGAAAAGTGGCCGGCTAGATTAAACGCGATTCCTCCGAGAGTA 1409
Query 1320 AACAAAGGCGATCTCGAGGAAATCACACCTGCAGCTTTCTTGGAGAACACGAAACTGTGG 1379
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1410 AACAAAGGCGCTCTCGAGGAAATCACACCTGAAGCTTTCTTGGAGAACACGAAACTGTGG 1469
Query 1380 AAACAGAGAGTTTCTTATTACAAGAAATTAGATTACCAGTTGGGTGATACCGGGAGATAC 1439
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1470 AAACAGAGAGTTTCTTATTACAAGAAGTTAGATTACCAGTTGGGTGAAACCGGGAGATAC 1529
Query 1440 AGAAACTTAGTTGACATGAATGCTTACCTTGGTGGATTCGCGGCGGCTCTAGTCG-ATGA 1498
||||||||||| |||||||| |||||||| |||||||||||||||||||||| || ||||
Sbjct 1530 AGAAACTTAGTCGACATGAACGCTTACCTCGGTGGATTCGCGGCGGCTCTAG-CGGATGA 1588
Query 1499 TCCGGTCTGGGTCATGAACATTGTCCCGGTCGAGGCTAAGCTCAATACGCTCGGTGTTAT 1558
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1589 TCCGGTCTGGGTCATGAACGTTGTCCCGGTCGAGGCTAAGCTCAATACGCTCGGTGTCAT 1648
Query 1559 CTACGAGCGTGGTCTAATCGGAACGTATCAAAACTGGTGTGAAGCGATGTCGACGTACCC 1618
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1649 CTACGAGCGTGGTCTAATCGGAACGTATCAAAACTGGTGTGAAGCCATGTCGACGTATCC 1708
Query 1619 AAGAACGTATGATTTTATCCATGCTGACTCGGTTTTCACATTATACCAAGGT-AAGTGTG 1677
|||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||
Sbjct 1709 AAGAACGTATGATTTTATCCATGCTGACTCGGTTTTCACATTGTACCAAGGTCAA-TGTG 1767
Query 1678 AACTGGAGGAGATATTGTTGGAGATGGACCGGATTCTTAGACCGGGTGGTGGAGTGATTA 1737
||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1768 AACCGGAGGAGATATTGTTGGAGATGGACCGAATTCTTAGACCGGGTGGTGGTGTGATTA 1827
Query 1738 TAAGAGATGACGTGGACGTTTTGATCAAGGTTAAGGAATTAACTAAAGGATTAGAATGGG 1797
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1828 TAAGAGATGACGTGGACGTTTTGATCAAGGTTAAGGAATTAACCAAAGGATTAGAATGGG 1887
Query 1798 AAGGTAGAATTGCTGACCACGAGAAGGGTCCTCATGAAAGAGAGAAGATTTACTATGCGG 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1888 AAGGTAGAATTGCTGACCACGAGAAGGGTCCTCATGAAAGAGAGAAGATTTACTATGCGG 1947
Query 1858 TGAAACAATATTGGACCGTTCCTGCTCCTTATGAAGATAAAAACAATACTAGTGCTCTCT 1917
||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||||||||
Sbjct 1948 TGAAACAGTATTGGACCGTTCCTGCGCCTGATGAAGATAAAAACAACACTAGTGCTCTCT 2007
Query 1918 CCTGATTTT-GCTCttttttttttcttacaatgttttttttt 1958
||||||||| | ||||||||||||||||||||||||||||
Sbjct 2008 CCTGATTTTTGAG-TTTTTTTTTTCTTACAATGTTTTTTTTT 2048
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97840862205
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5