BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483737
Length=1270
Score E
Sequences producing significant alignments: (Bits) Value
AT2G45960.3 | Symbols: PIP1B, TMP-A, ATHH2, PIP1;2 | plasma mem... 1975 0.0
AT3G61430.1 | Symbols: PIP1A, ATPIP1, PIP1, PIP1;1 | plasma mem... 1018 0.0
AT1G01620.1 | Symbols: PIP1C, TMP-B, PIP1;3 | plasma membrane i... 730 0.0
AT4G35100.1 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | plasma memb... 327 1e-88
> AT2G45960.3 | Symbols: PIP1B, TMP-A, ATHH2, PIP1;2 | plasma membrane
intrinsic protein 1B | chr2:18910295-18911982 FORWARD
LENGTH=1299
Length=1299
Score = 1975 bits (1069), Expect = 0.0
Identities = 1210/1276 (95%), Gaps = 18/1276 (1%)
Strand=Plus/Plus
Query 1 TTTAAATTTTATTTCCATTATCTTCCAACATTGAGTTTCTGTCACTATAAAAAACCACCA 60
||| |||||| ||||||| |||||||||| ||||||||| ||||||||||||| ||||||
Sbjct 20 TTTTAATTTTGTTTCCATCATCTTCCAACCTTGAGTTTCGGTCACTATAAAAAGCCACCA 79
Query 61 CTCTCTCTTCTTCTCTGCAACACATAACCCACTCACagagaaacccaaaaacctagaaag 120
|||||||| ||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 80 CTCTCTCTGCTTCTCTGCAACACATAACCCACTCAC--AG------AAAAACCTAGAAAG 131
Query 121 ctctagagagaaaaagagagagagatggaaggtaaagaagaagaTGTTAGAGTCGGAGCT 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 CTCTAGAGAGAAAGAGAGAGAGAGATGGAAGGTAAAGAAGAAGATGTTAGAGTCGGAGCT 191
Query 181 AACAAGTTTCCGGAGAGGCAACCTATCGGAACTTCTGCTCAGAGCGACAAGGACTACAAG 240
||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct 192 AACAAGTTTCCGGAGAGGCAACCGATCGGAACTTCGGCTCAGAGTGACAAGGACTACAAA 251
Query 241 GAGCCACCACCTGCGCCGTTGTTCGAGCCCGGCGAGATTGCTTCGTGGTCATTCTGGAGA 300
|||||||||||||||||||||||||||||||||||| | ||||| ||||| |||||||||
Sbjct 252 GAGCCACCACCTGCGCCGTTGTTCGAGCCCGGCGAGCTAGCTTCATGGTCCTTCTGGAGA 311
Query 301 GCTGGAATCGCTGAGTTCATCGCTACGTTTTTGTTCCTGTACATCACTGTTTTGACTGTT 360
||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 312 GCTGGGATTGCTGAGTTTATAGCTACGTTTTTGTTCCTGTACATCACTGTTTTGACTGTT 371
Query 361 ATGGGTGTGAAGAGGTCACCGAACATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGG 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 372 ATGGGTGTGAAGAGGTCACCGAACATGTGTGCTTCCGTCGGAATCCAAGGTATCGCTTGG 431
Query 421 GCTTTCGGTGGTATGATCTTCGCTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACAC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 432 GCTTTCGGTGGTATGATCTTCGCTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACAC 491
Query 481 ATCAACCCAGCGGTTACGTTCGGTTTGTTCTTAGCCAGGAAGCTTTCGCTCACACGAGCT 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 492 ATCAACCCAGCGGTTACGTTCGGTTTGTTCTTAGCTAGGAAGCTTTCGCTCACACGAGCT 551
Query 541 GTGTACTACATAGTGATGCAGTGCTTAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 552 GTGTACTACATAGTGATGCAGTGCTTAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGG 611
Query 601 TTCCAACCAAAGCAATACCAGGCTTTGGGAGGTGGAGCCAACACCATAGCTCATGGTTAC 660
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 612 TTCCAGCCAAAGCAATACCAGGCTTTGGGAGGTGGAGCCAACACCATAGCTCATGGCTAC 671
Query 661 ACAAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTC 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 672 ACCAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTC 731
Query 721 TTCTCAGCCACTGATGCCAAGAGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCG 780
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 732 TTCTCTGCCACTGATGCCAAGAGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCG 791
Query 781 CTCCCAATCGGATTCGCTGTGTTCTTGGTTCACTTAGCAACCATCCCCATCACTGGAACC 840
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 792 CTCCCTATCGGATTCGCTGTGTTCTTGGTTCACTTAGCAACCATCCCCATTACTGGAACT 851
Query 841 GGAATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATTTTCAACAAGGACAACGCCTGG 900
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 852 GGAATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATCTTCAACAAGGACAACGCTTGG 911
Query 901 GACGACCA--T--TGGGTCTTTTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCT 956
|| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 912 GATGACCACGTGATGGGTCTTTTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCT 971
Query 957 CTACCACGTTATAGTCATCAGAGCCATCCCATTCAAGTCCAGAAGCTAA-GCTGATTGAG 1015
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 972 CTACCACGTTATAGTCATCAGAGCCATCCCATTCAAGTCCAGAAGCTAAAGCTGATTGAG 1031
Query 1016 TTCTTATTTTAAATCTGGCTTTCGTTCTTAGTTTGCttttttttGTGAATCTGCTACCTG 1075
|||| |||| |||||||||||| |||||||||||||||| |||||||||||| |||||||
Sbjct 1032 TTCT-ATTTAAAATCTGGCTTTTGTTCTTAGTTTGCTTTCTTTTGTGAATCTACTACCTG 1090
Query 1076 TGTGCGCCGTGTGTATCTGTTGTTCTCCTCTTCTTTGCCTAATGGAGACTTATGTAAAAC 1135
|||| |||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct 1091 TGTGTAACGTGTGTATCTGTTGT-C-C-TCTTCTTTGCCTAATGGAGACTTATGTAAAAC 1147
Query 1136 AAAGATATTCCCCAGAAACATCTGTAATATTTCTTCTCCATTT-ATCAAAGGATTTCTAT 1194
||||| || |||||||||||||||| || |||||||||||||| |||| |||||||||||
Sbjct 1148 AAAGACATGCCCCAGAAACATCTGTTATCTTTCTTCTCCATTTTATCAGAGGATTTCTAT 1207
Query 1195 AATTGGCACATTCTGGGTTTTTCTCAAGCAGGCAACTTATCTCGAATCAAAGTGGACCAA 1254
||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 1208 AATTGGCCCATTCTGGGTTTATCTCAAGCAGGCAACTTATCTTGAATCAAAGTGGACCAG 1267
Query 1255 ACATATTTAATGCATT 1270
||||||||||||||||
Sbjct 1268 ACATATTTAATGCATT 1283
> AT3G61430.1 | Symbols: PIP1A, ATPIP1, PIP1, PIP1;1 | plasma membrane
intrinsic protein 1A | chr3:22733474-22735335 FORWARD
LENGTH=1266
Length=1266
Score = 1018 bits (551), Expect = 0.0
Identities = 764/869 (88%), Gaps = 6/869 (1%)
Strand=Plus/Plus
Query 141 agagatggaaggtaaagaagaagaTGTTAGAGTCGGAGCTAACAAGTTTCCGGAGAGGCA 200
||| |||||||| || |||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct 180 AGATATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGGAGAGACA 239
Query 201 ACCTATCGGAACTTCTGCTCAGAGCGACAAGGACTACAAGGAGCCACCACCTGCGCCGTT 260
||| |||||||| || |||||||| ||||||||||||||||| |||||||| || |||||
Sbjct 240 ACCAATCGGAACATCAGCTCAGAGTGACAAGGACTACAAGGAACCACCACCAGCTCCGTT 299
Query 261 GTTCGAGCCCGGCGAGATTGCTTCGTGGTCATTCTGGAGAGCTGGAATCGCTGAGTTCAT 320
||||| || || ||| || |||| ||||| || ||||||||||| ||||||||||||||
Sbjct 300 TTTCGAACCTGGTGAGCTTTCTTCATGGTCTTTTTGGAGAGCTGGGATCGCTGAGTTCAT 359
Query 321 CGCTACGTTTT-TGTTCCTGTACATCACTGTTTTGACTGTTATGGGTGTGAAGAGGTCAC 379
|||||| |||| | || || ||||||||||| |||||||||||||| ||||| |||||||
Sbjct 360 CGCTAC-TTTTCTCTTTCTCTACATCACTGTCTTGACTGTTATGGGAGTGAAAAGGTCAC 418
Query 380 CGAACATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGGTATGATCT 439
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 419 CGAACATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGGTATGATAT 478
Query 440 TCGCTCTC-GTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCAGCGGTTACG 498
| || || |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 479 TTGC-CTTAGTCTACTGTACCGCTGGTATCTCCGGTGGACACATCAACCCAGCGGTTACT 537
Query 499 TTCGGTTTGTTCTTAGCCAGGAAGCTTTCGCTCAC-ACGAGCTGTGTACTACATAGTGAT 557
|| ||| ||||||||||| ||||||| ||||| || | ||||| ||||||||||||||||
Sbjct 538 TTTGGTCTGTTCTTAGCCCGGAAGCTGTCGCTTACTA-GAGCTCTGTACTACATAGTGAT 596
Query 558 GCAGTGCTTAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGGTTCCAACCAAAGCAATA 617
||||||||| |||||||||||||| ||||| ||||| || |||||||| || ||||||||
Sbjct 597 GCAGTGCTTGGGAGCTATCTGTGGTGCTGGAGTGGTTAAAGGGTTCCAGCCTAAGCAATA 656
Query 618 CCAGGCTTTGGGAGGTGGAGCCAACACCATAGCTCATGGTTACACAAAAGGAAGTGGTCT 677
||||||| | ||||| ||||| ||||| | |||||||||||||| || |||||||||||
Sbjct 657 CCAGGCTCTAGGAGGAGGAGCTAACACTGTGGCTCATGGTTACACCAAGGGAAGTGGTCT 716
Query 678 TGGAGCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTCTTCTCAGCCACTGATGC 737
|||||||||||| ||||| || || || ||||| ||||| ||||||||||| ||||| ||
Sbjct 717 TGGAGCTGAGATCATTGGCACATTCGTTCTTGTATACACAGTCTTCTCAGCAACTGACGC 776
Query 738 CAAGAGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCGCTCCCAATCGGATTCGC 797
||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||| || ||
Sbjct 777 CAAGAGAAATGCTCGTGACTCTCATGTCCCTATTCTTGCACCACTCCCAATCGGGTTTGC 836
Query 798 TGTGTTCTTGGTTCACTTAGCAACCATCCCCATCACTGGAACCGGAATCAACCCAGCAAG 857
|| |||||||||||||| ||||||||||| |||||||| || || ||||||||||| ||
Sbjct 837 GGTTTTCTTGGTTCACTTGGCAACCATCCCAATCACTGGCACAGGCATCAACCCAGCTAG 896
Query 858 AAGTCTTGGAGCTGCAATCATTTTCAACAAGGACAACGCCTGGGACGACCATTGGGTCTT 917
||| ||||||||||||||||| | |||||| ||| | ||||||| ||||| ||||| ||
Sbjct 897 AAGCCTTGGAGCTGCAATCATCTACAACAAAGACCATTCCTGGGATGACCACTGGGTGTT 956
Query 918 TTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCTCTACCACGTTATAGTCATCAG 977
||||||||| || |||||||| ||||||||||||||||| ||||| || | ||||||||
Sbjct 957 TTGGGTTGGCCCCTTCATTGGAGCTGCACTTGCTGCTCTTTACCATGTGGTTGTCATCAG 1016
Query 978 AGCCATCCCATTCAAGTCCAGAAGCTAAG 1006
||||||||| |||||||||||||||||||
Sbjct 1017 AGCCATCCCCTTCAAGTCCAGAAGCTAAG 1045
> AT1G01620.1 | Symbols: PIP1C, TMP-B, PIP1;3 | plasma membrane
intrinsic protein 1C | chr1:225665-227302 REVERSE LENGTH=1308
Length=1308
Score = 730 bits (395), Expect = 0.0
Identities = 716/872 (82%), Gaps = 18/872 (2%)
Strand=Plus/Plus
Query 137 agagagagatggaaggtaaagaagaagaTGTTAGAGTCGGAGCTAACAAGTTTCCGGAGA 196
||| |||||||||||| |||||||| |||||| |||| |||||||||||||| |||||||
Sbjct 119 AGATAGAGATGGAAGGGAAAGAAGAGGATGTTCGAGTGGGAGCTAACAAGTTCCCGGAGA 178
Query 197 GGCAACCTATCGGAACTTCTGCTCAGAGC-GACAAGGACTACAAGGAGCCACCACCTGCG 255
||||||| || || || || ||||||| | ||||| |||||||||||||||||||| ||
Sbjct 179 GGCAACCGATAGGTACATCGGCTCAGA-CGGACAAAGACTACAAGGAGCCACCACCAGCT 237
Query 256 CCGTTGTTCGAGCCCGGCGAGATTG-CTTCGTGGTCATTCTGGAGAGCTGGAATCGCTGA 314
|| || |||||||| |||||| || ||||||||| |||| ||||| |||||||| ||
Sbjct 238 CCATTTTTCGAGCCAGGCGAG-CTGAGTTCGTGGTCCTTCTACAGAGCCGGAATCGCCGA 296
Query 315 GTTCATCGCTACGTTTTTGTTCCTGTACATCACTGTTTTGACTGTTATGGGTGTGAAGAG 374
|||||| || || || |||| || ||||| || || ||||| || ||||| ||||||||
Sbjct 297 GTTCATAGCCACCTTCCTGTTTCTATACATAACAGTATTGACAGTGATGGGAGTGAAGAG 356
Query 375 -GTCACCGAACATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGGTA 433
| |||| ||||||||||| || || ||||||||||| || ||||||||||||||||| |
Sbjct 357 AG-CACCAAACATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTTGGGCTTTCGGTGGCA 415
Query 434 TGATCTTCGCTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCAGCGG 493
||||||| || || |||||||| || ||||| ||||| ||||| ||||| ||||||||||
Sbjct 416 TGATCTTTGCCCTTGTCTACTGTACTGCTGGAATCTCTGGTGGGCACATAAACCCAGCGG 475
Query 494 TTACGTTCGGTTTGTTCTTAGC-CAGGAAGCTTTCGCTCAC-ACGAGCTGTGTACTACAT 551
| || || ||| ||||||| || | | ||||| || | || | ||||||| | |||||
Sbjct 476 TGACATTTGGTCTGTTCTTGGCTC-GTAAGCTGTCATTGACGA-GAGCTGTCTTTTACAT 533
Query 552 AGTGATGCAGTGCT-TAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGGTTCCAACCAA 610
|||||||| || | | ||||| ||||| || || || || ||||| || ||||| ||||
Sbjct 534 CGTGATGCAATG-TCTCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAGGCTTCCAGCCAA 592
Query 611 AGCAATACCAGGCTTTGGGAGGTGGAGCCAACACCA-TAGCTCATGGTTACACAAAAGGA 669
| | ||||| || | || || |||||||||| || | ||||| || ||||| || ||
Sbjct 593 ATCCTTACCAAACTCTCGGCGGAGGAGCCAACA-CAGTCGCTCACGGCTACACTAAGGGC 651
Query 670 AGTGGTCTT-GGAGCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTCTTCTCAGC 728
|||| || || |||||||| || |||||||| |||||||| ||||| |||||||| ||
Sbjct 652 TCTGGT-TTGGGTGCTGAGATAATCGGAACCTTCGTCCTTGTCTACACGGTCTTCTCCGC 710
Query 729 CACTGATGCCAAGAGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCGCTCCCAAT 788
|||||| |||||||||| |||||||||||| || ||||| ||| | ||||| ||||||||
Sbjct 711 CACTGACGCCAAGAGAAGCGCTCGTGACTCCCACGTTCCGATTTTGGCACCACTCCCAAT 770
Query 789 CGGATTCGCTGTGTTCTTGGTTCACTTAGCAACCATCCCCATCACTGGAACCGGAATCAA 848
||||||||||||||||||||||||||| || || || || ||||| ||||| ||||| ||
Sbjct 771 CGGATTCGCTGTGTTCTTGGTTCACTTGGCGACGATTCCAATCACCGGAACAGGAATTAA 830
Query 849 CCCAGCAAGAAGTCTTGGAGCTGCAATCATTTTCAACAAGGACAACGCCTGGGACGACCA 908
|||||| || |||||||||||||||||||| | |||||||||| |||| |||||||||||
Sbjct 831 CCCAGCTAGGAGTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTTGGGACGACCA 890
Query 909 TTGGGTCTTTTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCTCTACCACGTTA- 967
||| | || ||||| |||||||||||||| || || ||||| ||||| |||||| |
Sbjct 891 CTGGATATTCTGGGTCGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTTACCACCA-AC 949
Query 968 TAGTCATCAGAGCCATCCCATTCAAGTCCAGA 999
| |||||||||||||| |||||||||||||||
Sbjct 950 TTGTCATCAGAGCCATTCCATTCAAGTCCAGA 981
> AT4G35100.1 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | plasma membrane
intrinsic protein 3 | chr4:16708598-16710248 FORWARD
LENGTH=1207
Length=1207
Score = 327 bits (177), Expect = 1e-88
Identities = 433/554 (78%), Gaps = 27/554 (5%)
Strand=Plus/Plus
Query 412 ATCGCTTGGGCTTTCGGTGGTATGATCTTCGCTC-TCGTCTACTGCACCGCTGGTATCTC 470
||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||
Sbjct 300 ATCGCTTGGGCTTTCGGTGGTATGATCTTCG-TCCTCGTCTACTGCACCGCCGGTATCTC 358
Query 471 CGGTGGACACATCAACCCAGCGGTTACGTTCGGTTTGTTCTTAGCCAGGAAGCTTTCGCT 530
||||| ||||| |||||||| || || |||||| ||||||| ||| | ||| | || |
Sbjct 359 TGGTGGTCACATTAACCCAGCTGTGACTTTCGGTCTGTTCTTGGCCCGTAAGGTCTCTTT 418
Query 531 CACACGAGCTGTGTACT-ACAT-AGT-GATGCAGTG-CTTAGGAGCTATCTGTGGAGCTG 586
|||||| | | | |||| | | | | ||||| ||| ||||| || ||||| | ||
Sbjct 419 GGTGCGAGCTCT-TGGTTACATGA-TAGCT-CAGTGTCTT-GGAGCCATTTGTGGTG-TG 473
Query 587 G-TGTGGTCAAGGGGTTCCAACCAAAG-CAATACCAGGCT-TTGGGAGGTGGAGCCAACA 643
| | | || || | ||| | ||| | ||| | || |||| || ||||| ||||
Sbjct 474 GGTTTCGTGAAAGCTTTC-ATGAAAACTCCTTACAACACTCTTGGT-GGAGGAGCTAACA 531
Query 644 CCATAGCTCATGGTTACA-CAAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGAACCTTT 702
|| ||||| | ||||||| |||| |||| || ||| |||||||||||||||||||| |||
Sbjct 532 CCGTAGCTGACGGTTACAGCAAA-GGAACTGCTCTCGGAGCTGAGATTATTGGAAC-TTT 589
Query 703 -GTCCTTGTTTACACCGTCTTCTCAGCCACTGATGCC-AAGAGAAACGCTCGTGACTCTC 760
||||||||||||||||| ||||| || ||||| || ||||||| ||||||||||||||
Sbjct 590 CGTCCTTGTTTACACCGTTTTCTCTGCAACTGAC-CCTAAGAGAAGCGCTCGTGACTCTC 648
Query 761 ATGTTCCTATTCTAGCACCGCTCCCAATCGGATTCGCTGTGTTCTTGGTTCACTTAGCAA 820
| | || || | || || || ||||| ||||| ||||||||| |||| || || || |
Sbjct 649 ACATCCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTA 708
Query 821 CCATCCCCATCACTGGAACCGGAATCAACCCAGCAAGAAGTCTT-GGAGCTGCAATCATT 879
| |||||||| |||||||| || ||||||||||| ||||| ||| || ||||| | ||
Sbjct 709 CTATCCCCATTACTGGAACTGGTATCAACCCAGCTAGAAG-CTTTGGTGCTGCTGTTATC 767
Query 880 TTCAACAAGGACAACGCCTGGGACGACCATTGGGTCTTTTGGGTTGGACCATTCATTGGT 939
| |||||| || || || ||||| ||||| ||| ||||||||||||| || ||| ||||
Sbjct 768 TACAACAACGAGAAGGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTC-TTGG- 825
Query 940 GCTGCACTTGCTGC 953
| ||||| |||||
Sbjct 826 GA-GCACTAGCTGC 838
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62449477980
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5