BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483793
Length=2570
Score E
Sequences producing significant alignments: (Bits) Value
AT2G46380.1 | Symbols: | Protein of unknown function (DUF3133)... 3823 0.0
AT3G61670.1 | Symbols: | Protein of unknown function (DUF3133)... 444 2e-123
AT2G46390.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 71.3 4e-11
> AT2G46380.1 | Symbols: | Protein of unknown function (DUF3133)
| chr2:19039202-19042348 FORWARD LENGTH=2659
Length=2659
Score = 3823 bits (2070), Expect = 0.0
Identities = 2354/2494 (94%), Gaps = 7/2494 (0%)
Strand=Plus/Plus
Query 81 ATTTTCGTCTGTTTGTAATGGCTGAGTTGTCAACGATCGAAGCAAGGCTGGTTCGTTGTC 140
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 159 ATTTTCGTTTGTTTGTAATGGCTGAGTCGTCAACGATCGAAGCAAGGCTGGTTCGATGTC 218
Query 141 CAAAGTGCAAGAATCTCTTACAAGAGCCTAAAGATTGCCCCTTTTTCCAGTGTGGCGGTT 200
| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 219 CCAAGTGCAAGAATCTCTTACAAGAGCCTAAAGATTGCCCCTTTTTTCAGTGTGGTGGTT 278
Query 201 GTGGAACCGTTCTTTGTGCCAAGAACAAGGACCGTGAAGCTGATTTATTGTCGGTTAAGT 260
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 279 GTGGAACCGTTCTTTGCGCCAAGAACAAGGACCGTGAAGCTGATTTATTGTCGGTTAAGT 338
Query 261 CCGTGGAAAATAGAGCCAAAGAAACTCAAGTTAATTCTGGTTCAATTGATGGAGAATCTG 320
|||| ||||||||| ||||||||| | |||||| ||||| |||| ||| | ||||||||
Sbjct 339 CCGTTGAAAATAGATCCAAAGAAATTGAAGTTACCTCTGGCTCAAGTGAAGAAGAATCTG 398
Query 321 ATTCAGATGCTTCATTAAGACACCAACAAAATGGTCAAACAGAGACTTGGGATGTTCACA 380
||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 399 ATTCAAATGCTTCATTAAGACACCAACAAGATGGTCAAACTGAGACTTGGGATGTTCACA 458
Query 381 GTGATCCTACTTCGAAACTGAATGTTGTTGATCCGGGTAATAACGATTCTCAACCAGGTT 440
|||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 459 ATGATCCTAGTTCGAAAATGAATGTTGTTGATTCGGGTAATAACGATTCTCAACCAGGTT 518
Query 441 TGGATCGGTTTAGGCAAAGAACAACCAAGAGATGCGATTTCCAAGGTTTCAGATTCTCCA 500
|||||| | ||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 519 TGGATCAGATTAGGAAAAGAACAACCAAGAGATGCGATTTAGAAGGTTTCAGATTCTCCA 578
Query 501 CTTCTAACTACTTTT-CAGATTCTCTGTCTAGTGATGAAGCAATTGAGCAAGACAGAGCT 559
|||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 579 CTTCTAACTA-TTTTACAGATTCTCTGTCTACTGATGAAGCAATTGAGCAAGACAGAGCT 637
Query 560 GGACTGGTGAGAAAATTGGATAAGCTAAAAGAACAGCTTGTTCAACCTAAAGAGCAGCAG 619
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 638 GGACTGGTGAGAAAATTGGATAAGCTAAAAGAACAGCTTGTTCAACCTAAAGAACAGCAG 697
Query 620 ATCCCGAGTTCGTCTTCAGGATTCGAAAAGCCTCCATTGCGGGTTTTCAGTTCCGGGAAA 679
|||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||
Sbjct 698 ATCCCGAGTTCGTCTTCAGGATTCCAAAAGGCTCCATTGCGGGTTTTCAGCTCCGGGAGG 757
Query 680 CATATTGCAGCTCCTTCCTGTTACCGGAATTATCCAGAACCCGAACCTCCATGTCTTTAT 739
| |||||||| |||||||| |||| | ||||| ||||||||||||||||||||||||||
Sbjct 758 CGTATTGCAGGTCCTTCCTACTACCAGTATTATTCAGAACCCGAACCTCCATGTCTTTAT 817
Query 740 AACAATAACACTGATGTTTCTCTACGTGGTCCGATGCATAACCCCGCTCATGTTCCAGCA 799
||||| |||| |||||||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct 818 AACAACAACAGTGATGTTTCTCTACATGGTCCGATGCATAACCCGGCTAATGTTCCAGCA 877
Query 800 TATGGAGACCCTCACGCTTTCCAAATGCATGATAGAACTCTGCAGCCATCTCATCTGCAC 859
||||| |||||||||| |||| ||||||||| |||||||||||||||||||||||||||
Sbjct 878 TATGGTGACCCTCACGGGTTCCCAATGCATGAAAGAACTCTGCAGCCATCTCATCTGCAC 937
Query 860 AACTCTAGACAGTATATTGGCAATAATGGTCATGAT-TTGTTTGATACACATCCTGGA-A 917
|||||||||||||||||||| ||||||||||||||| || ||||||||||| ||| | |
Sbjct 938 AACTCTAGACAGTATATTGGTAATAATGGTCATGATGTT-TTTGATACACACCCT-CATA 995
Query 918 ATGGGATGTTTCATCAATCAACTTGCTCTTGTTCCCACTGCTATGATCCATATCATAGAG 977
|||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||
Sbjct 996 ATGGGATGTTTCATCAATCAACTTGCTCTTGTACCCATTGCTATGACCCATATCATAGAG 1055
Query 978 CTTCAGGCTCAGTGTTTCCTCCCTCAGGGTTGCCTGATGCTCTTTGTAATGCCGGTTTTT 1037
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 1056 CTTCAGGCTCAGTGTTTCCTCCCTCAGGGTTGCCTGATGCTCTGCGTAATCCCGGTTTTT 1115
Query 1038 ACCCTCGTGAGAGAAGTTTTGGGTTTGGTACTGCATTGCATAGTCCGAGAACCTTTATTC 1097
|||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 1116 ACCCTCATGAGAGAAGTTTTGGGTTTGGTACTTCATTGCATAGCCCGAGAACCTTTATTC 1175
Query 1098 CTCCTGGTTCTCAATCTCCCGGTCCACAGCTCCAACGAAGATGCCCGAGTGGATTTAAGG 1157
||||||||||||||||||| || |||||||||| | |||||||| |||||||||||||||
Sbjct 1176 CTCCTGGTTCTCAATCTCCTGGACCACAGCTCCGAGGAAGATGCACGAGTGGATTTAAGG 1235
Query 1158 ATACGGGAATGAATGCAATTTCTCGTGTTCATCCCTCTAAGCGTGTATCATCTTCAGGTG 1217
||| | ||||||||||| ||||||||||||| |||||||| | |||||||||||||||||
Sbjct 1236 ATATGCGAATGAATGCAGTTTCTCGTGTTCACCCCTCTAAACCTGTATCATCTTCAGGTG 1295
Query 1218 GTTCTCGCCTAATTTACCCTGTAGCTGGTGGTGCACCATTTATAAACTGTATAAACTGCT 1277
|||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1296 GTTCTCGCCTAATTCAACCTGTGGCTGGTGGTGCACCATTTATAAACTGTATAAACTGCT 1355
Query 1278 TCAAACTTCTGAAATTGCCAGACAAAATAGATTCTGCTACGAGAAAGAAACAGAGAATGC 1337
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1356 TCAAACTTCTGAAATTGCCAGAGAAAATAGATTCTGCTACGAGAAAGAAACAGAGAATGC 1415
Query 1338 GCTGTGGAGCATGCTCTTGTGTAATAGATTATACCTTTGTTGATAAGAAACTCATTCTCT 1397
|||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 1416 GCTGCGGAGCATGCTCTTGTGTAATAGATTATTCCTTTGTTGATAAGAAGCTCATTCTCT 1475
Query 1398 CTACAGATCCTGCTTCAGCAAGAAAAGCAGAAACTCATAGTACCCTGCGTTGGGAAACTA 1457
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 1476 CTACAGATCCTGCTTCAGCAAGAAAACCAGAAACTCATAGTAGGCTGCGTTGGGAAACTA 1535
Query 1458 CTGCTAACTTCTCTTCTGATGACTATGATAATGCTGCTTACGAATTCCATGCAATGGATA 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1536 CTGCTAACTTCTCTTCTGATGACTATGATAATGCTGCTTACGAATTCCATGCAATGGATA 1595
Query 1518 GAGGACCAGCCGATGTATCAACTGGTCTGGCTTTGATCTCCAACAAAGCTCAAGAAATGC 1577
||||| |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct 1596 GAGGATCAGCCGATGTATCAACTGCTCTGGTTTTGATCTCCAACACAGCTCAAGAAATGC 1655
Query 1578 AGATTGCGGATTCTACTTCTCCTAGCGTGTCTGAAGACGAGTTAAGTTCAGACAGTTCAA 1637
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1656 AGATTACGGATGCTACTTCTCCTAGCGTGTCTGAAGACGAGTTAAGTTCAGACAGTTCAA 1715
Query 1638 CAGTCAAGAAAGTTACTCCTGATTCGCTTCTTCACAAACACTTTGAATACTCTTCGATCA 1697
|||| | |||||||| || || ||| | |||||||||||| |||||||||||||||||||
Sbjct 1716 CAGTTAGGAAAGTTAATCTTGCTTCACCTCTTCACAAACAATTTGAATACTCTTCGATCA 1775
Query 1698 ATGTAAGGGACCGGTCTGGGCCAAGGAGCCGAAGCTCTCGTTCAGAACGGGACAGGGTCA 1757
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1776 ATGTAAGGGACCGGTCTGGGCCAAGGAGCCAAAGCTCTCGTTCAGAACAGGACAGGGTCA 1835
Query 1758 CACTGAGCAAAACATCCATGAGACAGAACTCTATGAAAGAAGCTTCAGTTGCAATTGAGA 1817
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1836 CACTGAGCAAAACAGCCATGAGACAGAACTCTATGAAAGAAGCTTCAGTTGCAATTGAGA 1895
Query 1818 TGGACGTTAATGACTACTCTCACAACAATGAAGTGTCTCAGGATTCTGCAAATGACTATA 1877
||||||||||||||||||||||||||||||||||||| || |||||||| ||||||| ||
Sbjct 1896 TGGACGTTAATGACTACTCTCACAACAATGAAGTGTCACAAGATTCTGCGAATGACTGTA 1955
Query 1878 CAGATGATCAAGGAAGAACCAAGAAGGGCAGATTTGCGAGTATCGTGAAGAATAGCTTCA 1937
|||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1956 CAGATGATCAGGGAAGAACCAAGAAGGGTGGATTTGCGAGTATCATGAAGAATAGCTTCA 2015
Query 1938 AGGATCTGAAGAAATCCATACAGAACGAAGGCAGAAGTGATGTCTCAATAAATGGGCATC 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2016 AGGATCTGAAGAAATCCATACAGAACGAAGGCAGAAGTGATGTCTCAATAAATGGTCATC 2075
Query 1998 CTGTAGCTGAACGTCTTATGAAAATGGCAGAGAAGCAGGCTGGACCAATCCGACCAGGAA 2057
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2076 CTGTAGCTGAACGTCTGGTGAAAATGGCAGAGAAGCAGGCTGGACCAATCCGACCAGGAA 2135
Query 2058 ACTACTGGTACGACTACAGAGCTGGATTCTGGGGAGTAATGGGAAGTCATTGCCTTGGAA 2117
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 2136 ACTACTGGTACGACTACAGAGCTGGATTCTGGGGAGTACTGGGAAGTCACTGCCTTGGAA 2195
Query 2118 TATTACCGCCTTTCATTGAAGAGCTCAATTACCCAATGCCAGAGAATTGCGCTGGCGGAA 2177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2196 TATTACCGCCTTTCATTGAAGAGCTCAATTACCCAATGCCAGAGAATTGCGCTGGCGGAA 2255
Query 2178 CCACAAGGGTCTTTGTGAACGGAAGAGAGCTTCACCAGAAAGACCTGCGCCTGCTCACTG 2237
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2256 CCACAAGAGTCTTTGTGAACGGAAGAGAGCTTCACCAGAAAGACCTGCGCTTGCTCACTG 2315
Query 2238 CCAGAGGTCTCCCACGGGATGGAGATCGATCGTATACTGTTTACATCTCAGGTAGAGTCA 2297
|||||||||| ||||||||| |||||||||| || |||||||||||||||||||||||||
Sbjct 2316 CCAGAGGTCTTCCACGGGATAGAGATCGATCCTACACTGTTTACATCTCAGGTAGAGTCA 2375
Query 2298 TAGACGAAGATACCGGTGAAGAGCTAGATAGTCTTGGCAAACTCGCCCCAACGGTCGATA 2357
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2376 TAGACGAAGATACCGGTGAAGAGCTAGATAGTCTTGGTAAACTCGCCCCAACGGTCGATA 2435
Query 2358 AGCTAAAGCGTGGGTTTGGGATGAGAGTTCCGAGGAGAGCTGCATGAAGAA-TCTAAAGA 2416
||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||
Sbjct 2436 AGCTAAAGCGTGGGTTTGGGATGAGAGTTCCGAGGAGAGCTACATGAAGAAATATAAAGA 2495
Query 2417 GCCTCTCCGTTTTGTTGTTGTATCCTCTGAACATCCGTGCTAGATTATCCTAACATTACT 2476
|||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 2496 GCCTCTCCATTGTGTTGTTGTATTCTCTGAACATCCGTGTTAGATTATCCTAACATTACT 2555
Query 2477 AGGCTAAACAATTTTCTAACTCTAGAGAGCCTTATGATCAATGTAAAGAATGAGAAAGTG 2536
||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 2556 AGGCTAAACTTTTTTCTAACTTTACAGAGCCTTATGATCAATGTAAAGAATGAGAAAGTG 2615
Query 2537 GAAAATGAAATATCATTATTAGTAACAAGAATCT 2570
||||||||||||||||||||||||||||||||||
Sbjct 2616 GAAAATGAAATATCATTATTAGTAACAAGAATCT 2649
> AT3G61670.1 | Symbols: | Protein of unknown function (DUF3133)
| chr3:22818589-22822020 FORWARD LENGTH=2873
Length=2873
Score = 444 bits (240), Expect = 2e-123
Identities = 589/751 (78%), Gaps = 49/751 (7%)
Strand=Plus/Plus
Query 1680 TTGAATACTCTTCGATCAATGTAAGGGACCGGTCTGG-GCCAAGG-AGCCGAAGCTCTCG 1737
|||| |||||||||||||| | | ||||||||||| | | ||| ||||| ||||||||
Sbjct 2005 TTGATTACTCTTCGATCAA--TCA-TGACCGGTCTGGAG-C-AGGCAGCCGTAGCTCTCG 2059
Query 1738 TTCAGAACGGGACAGGGTCACACTGAGCAA---AACATCCATGAGACAGAACTCTATGAA 1794
|||||||| |||| ||||||||||||||| |||| |||||||||||||||| |||||
Sbjct 2060 TTCAGAACACGACAAGGTCACACTGAGCAAGGCAACAGCCATGAGACAGAACTCCATGAA 2119
Query 1795 AGAAGCTTCAGTTGCAATTGAGATGGACGTTAA--T-GACTACT-CTCACAACAATGAAG 1850
||| | |||| |||||| ||||||||| ||||| | || ||| ||| || | | ||
Sbjct 2120 AGAGGTTTCACTTGCAAGTGAGATGGAAGTTAACTTCAACGACTACTCTCATC-GT-AAC 2177
Query 1851 TGTCTCAGGATTCTGCAAATGACTATACAGATGATCAAGGAAGAACCAAGAAGGGCAGAT 1910
|| || | ||| ||| | || ||| | | | |||| | |||||| || |||
Sbjct 2178 AGT-GGAGTA-TCT--AAA-G---AT-CAG--CAGC-A--AAGAGCTAAGAAGAGCGGAT 2223
Query 1911 TTGCGAGTATCGTGAAGAATAGCTTCAAGGATCTGA-AGAAATCCATACAG-A--ACGAA 1966
| ||||| || |||||||| |||||||| ||||||| | ||||| || ||| | | |||
Sbjct 2224 TCGCGAGCATTGTGAAGAAAAGCTTCAAAGATCTGACA-AAATCTATTCAGAATGATGAA 2282
Query 1967 -GG--CAGAAGTGATGTCTCAATAAATGGGCATCCTGTAGCTGAACGTCTTATGA-AAAT 2022
|| || ||| |||| || |||||||| |||||| || | |||||||| ||| |||
Sbjct 2283 GGGAACAAAAGCAATGTTTCGATAAATGGACATCCTTTAACCGAACGTCTGCTGAGAAA- 2341
Query 2023 GGCAGAGAAGCAGGCTGGA-CCAATCCGACCAGGAAACTACTGGTACGACTACAGAGCTG 2081
||||||||||| || ||| || || | ||||||||||||||||| || ||||||||||
Sbjct 2342 AGCAGAGAAGCAAGCCGGAGTCATTCAG-CCAGGAAACTACTGGTATGATTACAGAGCTG 2400
Query 2082 GATTCTGGGGAGTAATGGGAAGTC-ATTGCCTTGGAATATTACCGCCTTTCATTGAAGAG 2140
|||||||||||||||||||| ||| | | ||||||||||||||||| ||||| ||||||
Sbjct 2401 GATTCTGGGGAGTAATGGGAGGTCCAG-GTCTTGGAATATTACCGCCATTCATAGAAGAG 2459
Query 2141 CTCAATTACCCAATGCCAGAGAATTGCGCTGGCGGAACCACAAGG-GTCTTTGTGAACGG 2199
|| |||||||||||||||||||| ||| | || ||||| || || || |||||||||||
Sbjct 2460 CTTAATTACCCAATGCCAGAGAACTGCTCAGGTGGAACAACG-GGAGTGTTTGTGAACGG 2518
Query 2200 AAGAGAGCTTCACCAGAAAGACCTGCGCCT-GCTCACTGCCAGAGGTCTCCCACGGGATG 2258
|||||||||||||| |||||| || | || ||| | | ||||| || || | |||
Sbjct 2519 AAGAGAGCTTCACCGGAAAGATTTG-GACTTGCTTGCGGGTAGAGGACTTCCTCCGGACA 2577
Query 2259 GAGATCGATCGTATACTGTTTACATCTCAGGTAGAGTCATAGACGAAGATACCGGTGAAG 2318
||||| |||| || | |||| |||| | |||||||||||||| ||||| ||||||||||
Sbjct 2578 GAGATAGATCCTACATTGTTGACATAACGGGTAGAGTCATAGATGAAGACACCGGTGAAG 2637
Query 2319 AGCTAGATAGTCTTGGCAAACTCGCCCCAACGGTCGATAAGCTAAAGCGTGGGTTTGGGA 2378
|||| ||| | || || ||||| ||||||||| | || || | ||||||||||||||||
Sbjct 2638 AGCTCGATTGCCTCGGGAAACTAGCCCCAACGATTGAGAAATTGAAGCGTGGGTTTGGGA 2697
Query 2379 TGAGAGTTCCGAGGAGAGCTGCATGAA-GAA 2408
||||| |||| | |||| || | |||| |||
Sbjct 2698 TGAGACTTCCAAAGAGAACTACGTGAAAGAA 2728
> AT2G46390.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 4 Blast
hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink). | chr2:19042301-19043060 REVERSE
LENGTH=348
Length=348
Score = 71.3 bits (38), Expect = 4e-11
Identities = 38/38 (100%), Gaps = 0/38 (0%)
Strand=Plus/Minus
Query 2533 AGTGGAAAATGAAATATCATTATTAGTAACAAGAATCT 2570
||||||||||||||||||||||||||||||||||||||
Sbjct 348 AGTGGAAAATGAAATATCATTATTAGTAACAAGAATCT 311
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127574536049
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5