BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483830
Length=1817
Score E
Sequences producing significant alignments: (Bits) Value
AT2G46660.1 | Symbols: CYP78A6 | cytochrome P450, family 78, su... 2712 0.0
AT3G61880.2 | Symbols: CYP78A9 | cytochrome p450 78a9 | chr3:22... 1101 0.0
> AT2G46660.1 | Symbols: CYP78A6 | cytochrome P450, family 78,
subfamily A, polypeptide 6 | chr2:19153328-19155489 REVERSE
LENGTH=1939
Length=1939
Score = 2712 bits (1468), Expect = 0.0
Identities = 1727/1848 (93%), Gaps = 33/1848 (2%)
Strand=Plus/Plus
Query 1 CCCCACAGACCAAAAGACACTCTCCTTTTG-TT-tctctctc-tctctcCACTTACTTTG 57
|||||||| ||||||||||||||||||||| || |||||||| ||||| |||||||||||
Sbjct 1 CCCCACAGGCCAAAAGACACTCTCCTTTTGTTTATCTCTCTCTTCTCTTCACTTACTTTG 60
Query 58 CTTTGATCCGCCATGGCTACGAAACTCGAAAGCTCCTTAATCTTTGCCCTTTTGTCCAAA 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CTTTGATCCGCCATGGCTACGAAACTCGAAAGCTCCTTAATCTTTGCCCTTTTGTCCAAA 120
Query 118 TGCAGCGTTCTAAGCCAAACTAACATCGCTTTCTCTCTCCTCGCCGTTACAATCATCTGG 177
|||||||||||||||||||| ||| | || ||||| ||||||||||| ||||||||||||
Sbjct 121 TGCAGCGTTCTAAGCCAAACCAACCTTGCCTTCTCCCTCCTCGCCGTCACAATCATCTGG 180
Query 178 CTCGCCGTCTCTCTCTTCTTCTGGACCTATCCCGGTGGACCTGCTTGGGGTAAATTCCTC 237
|||||| | ||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct 181 CTCGCCATATCTCTCTTCTTATGGACCTATCCCGGTGGACCTGCTTGGGGGAAATACCTC 240
Query 238 TTCCGTCGGTTTACATCCGGTTCATACAAAACCGGAAACGTTATTCCCGGTCCAAGAGGC 297
||| | ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 241 TTCGGCCGGTTAATATCCGGTTCATACAAAACCGGAAACGTTATTCCCGGTCCAAAAGGC 300
Query 298 TTGCCTTTGGTTGGAAGCATGTCACTCATGTCAAGCACTCTAGCTCACCGACGAATCGCT 357
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TTCCCTTTGGTTGGAAGCATGTCACTCATGTCAAGCACTCTAGCTCACCGACGAATCGCT 360
Query 358 GATGTTGCTGAGAAATTCGGAGCCAAGAGGCTCATGGCTTTCAGCTTAGGAGAGACTCGC 417
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GATGCAGCTGAGAAATTCGGAGCCAAGAGGCTCATGGCTTTCAGCTTAGGAGAGACTCGC 420
Query 418 GTGATCGTCACGTGCAATCCCGACGTCGCGAAAGAGATTCTGAATTGCCCGGTTTTTGCT 477
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 421 GTGATCGTCACGTGCAATCCCGACGTAGCGAAAGAGATTCTGAATAGCCCGGTTTTTGCT 480
Query 478 GACCGACCGGTTAAAGAATCGGCTTACTCTCTGATGTTTAACAGAGCAATTGGTTTTGCA 537
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 481 GATCGACCGGTTAAAGAATCGGCTTACTCACTGATGTTTAACAGAGCAATTGGTTTTGCA 540
Query 538 CCACACGGTGTTTACTGGCGAACGCTTCGCCGTATCGCTTCGAACCATCTCTTTAGTCCA 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 541 CCACACGGTGTTTACTGGCGAACGCTTCGCCGTATCGCTTCGAACCATCTCTTTAGTACA 600
Query 598 AAACAAATCAGACGAGCCGAGACGCAGCGGCGGGAAATCGCTAGCCAGATGGTTGGGTTT 657
|||||||||||| ||||||||||||| || || | ||| | ||||||||||||| ||||
Sbjct 601 AAACAAATCAGAAGAGCCGAGACGCAACGACGAGTGATCTCAAGCCAGATGGTTGAGTTT 660
Query 658 CTTGGAAAACAGACTAGTAACGGACTCTGTTTTGTTCGTGAGTTGCTTAAAACGGCGTCG 717
|||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 661 CTTGAAAAACAGAGTAGTAACGAACCCTGTTTTGTTCGTGAGTTGCTTAAAACGGCGTCG 720
Query 718 CTTAACAACATGATGTGCTCTGTTTTCGGACAAGAGTATGAGCTTGAACAAAACCATGTT 777
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 721 CTTAACAACATGATGTGCTCTGTATTCGGACAAGAGTATGAGCTTGAAAAAAACCATGTT 780
Query 778 GAGTTACGTGAATTGGTCGAACAAGGTTATGATTTACTCGGAACATTGAATTGGACCGAT 837
|||||||||||| |||||||| ||||||||||||| |||||||| ||||||||||| |||
Sbjct 781 GAGTTACGTGAAATGGTCGAAGAAGGTTATGATTTGCTCGGAACGTTGAATTGGACTGAT 840
Query 838 CATCTTCCTTGGCTATTTGAATTTGATCCTCAGGGAATCCGGTCTAGATGTTCCACACTC 897
|| ||||||||||||| || ||||||||||| || |||||||||||||||||||||||
Sbjct 841 CACCTTCCTTGGCTATCGGAGTTTGATCCTCAAAGACTCCGGTCTAGATGTTCCACACTC 900
Query 898 GTACCGAAGGTAAACCGGTTTGTATCCCGGATTATATCTGAACACCGTCATCAAACCGGT 957
||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 901 GTACCAAAGGTAAACCGGTTTGTATCCCGGATTATATCCGAACACCGTAATCAAACCGGT 960
Query 958 GATTCGCCTCGTGATTTCGTCGACGTTTTGCTCTCCCTCCATGGTTCAGATAAATTATCG 1017
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GATTTGCCTCGTGATTTCGTCGACGTTTTGCTCTCCCTCCATGGTTCAGATAAATTATCC 1020
Query 1018 GACCCGGACATAATCGCCGTTCTTTGGGAGATGATATTCAGAGGAACAGACACAGTTGCG 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 GACCCGGACATAATCGCCGTTCTTTGGGAGATGATATTCAGAGGAACAGACACAGTTGCG 1080
Query 1078 GTTTTAATTGAGTGGGTCCTCGCTAGGATGGTCCTTCATCCAGATATTCAATCAACGGTA 1137
|| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1081 GTCTTAATCGAGTGGATCCTCGCTAGGATGGTCCTTCATCCAGATATGCAATCAACGGTA 1140
Query 1138 CAAAACGAGCTAGATCAAATAGTCGGAAAATCAAGAGCCGTAGATGAATCTGACTTGGCT 1197
||||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||
Sbjct 1141 CAAAACGAGCTGGATCAAGTAGTCGGGAAATCAAGAGCCCTAGATGAATCTGACTTGGCT 1200
Query 1198 TCACTTCCTTATCTAACGGCTGTAGTGAAAGAAGTATTGAGGCTTCATCCTCCAGGCCCA 1257
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1201 TCACTTCCATATCTAACGGCTGTGGTGAAAGAAGTATTGAGGCTTCATCCTCCAGGCCCA 1260
Query 1258 CTTCTATCATGGGCCCGTTTGGCCATAACAGACACGATCGTTGATGGTCGTCTTGTTCCG 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 CTTCTATCATGGGCCCGTTTGGCCATAACAGACACGATCGTTGATGGTCGTCTTGTTCCG 1320
Query 1318 GCAGGGACCACAGCAATGGTGAACATGTGGGCCGTATCGCATGATCCACACGTGTGGGTT 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 GCAGGGACCACAGCAATGGTGAACATGTGGGCCGTATCGCATGATCCACACGTGTGGGTT 1380
Query 1378 GATCCTTTGGAGTTTAAACCTGAGAGGTTCGTGGCAAAACAAGGTGAGGTGGAGTTTTCA 1437
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1381 GATCCTTTGGAGTTTAAACCTGAGAGGTTCGTGGCAAAAGAAGGTGAGGTGGAGTTTTCG 1440
Query 1438 GTTCTCGGGTCGGATTTGAGACTTGCACCGTTCGGGTCGGGTCGTCGGGTTTGCCCCGGG 1497
||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 1441 GTTCTTGGGTCGGATTTGAGACTTGCACCTTTCGGGTCGGGTCGTCGGATTTGCCCCGGG 1500
Query 1498 AAAAATCTTGGTTTGACTACCGTTACGTTTTGGACGGCGGCGTTGTTACATGAGTTTGAA 1557
|| ||||||||||| |||||||||| ||||||||||||| | |||||||||||||||||
Sbjct 1501 AAGAATCTTGGTTTTACTACCGTTATGTTTTGGACGGCGATGATGTTACATGAGTTTGAA 1560
Query 1558 TGGGGACCGTCCGATGGGAACGGCGTTGACTTATCTGAGAAACTGAGGCTTTCTTGTGAG 1617
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1561 TGGGGACCGTCCGATGGTAACGGCGTTGACTTATCTGAGAAACTGAGGCTTTCTTGCGAG 1620
Query 1618 ATGGCTAATCCTCTTGCTGCTAAATTGCGTCGTAGGCGCAGTTaaaaaaaaGA---T--T 1672
||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | |
Sbjct 1621 ATGGCTAATCCTCTTCCTGCTAAATTGCGCCGTAGGCGCAGTTAAAAAAAAGAAGCTCAT 1680
Query 1673 -T-----TTA----TT--AA----GCAGCTTTTCGTTTTATTAGAACTAACATTTTGATA 1716
| ||| || || ||||||||||||||||||||||||||||||||||||
Sbjct 1681 ATGAGAATTAGAGATTTTAATTAAGCAGCTTTTCGTTTTATTAGAACTAACATTTTGATA 1740
Query 1717 CTTGATGTGAtttttttttCTTT-CTTTATTTATGC-T-TGT-GTG---TTGTGAGTCTG 1769
| ||||||| ||||||||||||| |||||||| ||| | ||| ||| |||||||||||
Sbjct 1741 CGTGATGTG-TTTTTTTTTCTTTTCTTTATTTGTGCGTGTGTTGTGAACTTGTGAGTCTG 1799
Query 1770 AGAGGCGAGTGATGTGtttttattttttAGGTTGTAAATACATGAAAA 1817
||||| |||||||||||||| | ||||||||||||||||||| |||||
Sbjct 1800 AGAGGAGAGTGATGTGTTTT-ACTTTTTAGGTTGTAAATACAAGAAAA 1846
> AT3G61880.2 | Symbols: CYP78A9 | cytochrome p450 78a9 | chr3:22905868-22907958
REVERSE LENGTH=1847
Length=1847
Score = 1101 bits (596), Expect = 0.0
Identities = 1286/1610 (80%), Gaps = 84/1610 (5%)
Strand=Plus/Plus
Query 93 CTTAATCTTT-GCCCTTTTGTCCAAATGCAGCGTTCTAAGC-CAAACTAA-CATCGCTTT 149
|||| | ||| ||||| ||||||||||| ||| | || | | ||||| || | | ||| |
Sbjct 95 CTTACT-TTTGGCCCTCTTGTCCAAATGTAGCCTCCTTA-CTCAAACCAATC-TTGCTCT 151
Query 150 CTCTCTCCTC---GCCGTTACAATCATCTGGCTCGC-CGTCTCTCTCTTCTTCTGGACCT 205
|||||||||| ||| | | | | ||| ||||| | | ||||||||||||||| ||
Sbjct 152 CTCTCTCCTCGTAGCC-TCCCTAGCTTCT--CTCGCTC-TTTCTCTCTTCTTCTGG-TCT 206
Query 206 -ATCCCGGTGGACCTGCTTGGGGTAAATTCCTCTTCCGTCGGTTTACATCCGGTTCATAC 264
||||||| ||||| || ||||| ||| | ||||| || || || | | | |
Sbjct 207 CATCCCGGAGGACCCGCATGGGG-AAAGT--ACTTCC-TC----CACCGCC-G-CCGT-C 255
Query 265 AAAACCGGAAACGTTATTCCCGGTCCAAGAGGCTTGCCTTTGGTTGGAAGCATGTCACTC 324
||||| | ||| || ||||| ||||||||||| ||||| || ||||||||||| |||
Sbjct 256 -AAACC---ACCGTGATACCCGGGCCAAGAGGCTTACCTTTTGTCGGAAGCATGTCTCTC 311
Query 325 ATGTCAAGCACTCTAGCTCACCGACGAATCGCTG-ATGTTGCTGAGAAATTCGGAGCC-A 382
||||||| |||||| |||||||| | || || | | || |||||||| ||||| |
Sbjct 312 ATGTCAAACACTCTGGCTCACCGTTGCATAGCCGCA-ACCGCAGAGAAATTTAGAGCCGA 370
Query 383 AGAGGCTCATGGC-TTTCAGCTTAGGAGAGACTCGCGTGATCGTCACGTGCAATCCCGAC 441
| || | ||||| ||| || || ||||| |||||||||||||||||||||||||| ||
Sbjct 371 A-CGGTTAATGGCGTTT-AGTTTGGGAGAAACTCGCGTGATCGTCACGTGCAATCCTGAT 428
Query 442 GTCGCGAAAGAGATTCTGAATTGCCCGGTTTTTGCTGACCGACCGGTTAAAGAATCGGCT 501
|| || ||||||||||| || | |||||||| |||||||| |||||||| ||||| |||
Sbjct 429 GTAGCTAAAGAGATTCTAAACAGTCCGGTTTTCGCTGACCGCCCGGTTAAGGAATCAGCT 488
Query 502 TACTCTCTGATGTTTAACAGAGCAATTGGTTTTGCACCACACGGTGTTTACTGGCGAACG 561
|| || || ||||||||| | || || ||||| || || |||| ||||||||||||||
Sbjct 489 TATTCCCTCATGTTTAACCGTGCTATCGGTTTCGCTCCTTACGGCGTTTACTGGCGAAC- 547
Query 562 CTT-CGCCGTATCGCTTCGAACCATCTCTTT-AGTCCAAAACAAATCAGACGAGCCGAGA 619
||| | ||||| || || ||||| ||| || || ||||| || | ||| |||| |
Sbjct 548 CTTGAGAAAAATCGCGTCTAATCATCT-TTTCAGCCCGAAACAGATTAAACGTTCCGAAA 606
Query 620 CGCAGCG--GCGGGAAATCGCTAGCCAGATGGTTG-GGTTTCTTGGAAAACAGACT---A 673
||||| | ||| | ||||| | || || | || || ||| |||||||| | |
Sbjct 607 CGCAGAGAAGCGTG--ATCGCGAATCAAATCG-TGAAGTGTCTCACAAAACAGAGTAACA 663
Query 674 GTAACGGACTCTGTTTTGTTCGTGAGTTGCTTAAAACGGCGTCGCTTAACAACATGATGT 733
|| || |||||||| | ||||| ||| | |||||||| |||||||| ||||||||||
Sbjct 664 CCAAAGGTCTCTGTTTCGCACGTGACTTGATCAAAACGGCATCGCTTAATAACATGATGT 723
Query 734 GCTCTGTTTTCGGACAAGAGTATGAGCTT---G-A-A-CA-AAACCA-TG-TTGAGTTAC 784
|||||||||||||| |||| || |||||| | | | || || | || |||| |||
Sbjct 724 GCTCTGTTTTCGGAAAAGAATACGAGCTTGAGGAAGAGCATGAAGAAGTGAGTGAGCTAC 783
Query 785 GTGAATTGGTCGAACAAGGTTATGATTTACTCGGAACATTGAATTGGACCGATCATCTTC 844
|||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||| |
Sbjct 784 GTGAATTGGTGGAAGAAGGTTATGATTTACTCGGTACACTGAATTGGACCGATCATCTCC 843
Query 845 CTTGGCTATTTGAATTTGATCCTCAGGGAATCCGGTCTAGATGTTCCACA-CTCGTACCG 903
| ||||| | ||||||||||||||| |||||||||||||||| || | | ||||| ||
Sbjct 844 CATGGCTCTCTGAATTTGATCCTCAAAGAATCCGGTCTAGATGCTCTA-ATCTCGTCCCA 902
Query 904 AAGGTAAACCGGTTTGT-ATCCCGGATTATATCTGAACACCGTCATCAAAC-CGGTGATT 961
|| |||||||||||||| | ||||||||| ||||| |||||| | ||||| | |||| |
Sbjct 903 AAAGTAAACCGGTTTGTGA-ACCGGATTATCTCTGACCACCGTGAACAAACTC-GTGACT 960
Query 962 CGCCTCGTGATTTCGTCGACGTTTTGCTCTCCCTCCATGGTTCAGATAAATTATCGGACC 1021
| || |||| ||||| ||||| |||||||| ||| ||||| | ||||||||||| ||||
Sbjct 961 CACCGAGTGACTTCGTTGACGTATTGCTCTCTCTCGATGGTCCTGATAAATTATCCGACC 1020
Query 1022 CGGACATAATCGCCGTTCTTTGGGAGATGATATTCAGAGGAACAGACACAGTTGCGGTTT 1081
| || || ||||||||||| ||||| ||||||||||||||||| ||||| || || ||||
Sbjct 1021 CTGATATCATCGCCGTTCTATGGGAAATGATATTCAGAGGAACTGACACGGTGGCTGTTT 1080
Query 1082 TAATTGAGTGGGTCCTCGCTAGGATGGTCCTTCATCCAGATATTCAATCAACGGTACAAA 1141
| || |||||| | || |||||||||||||||||||||||||||||||| ||||| || |
Sbjct 1081 TGATCGAGTGGATTCTTGCTAGGATGGTCCTTCATCCAGATATTCAATCGACGGTTCACA 1140
Query 1142 ACGAGCTAGATCAAATAGTCGGAAAATCAAGAGCCGTAGATGAATCTGACTTGGCT-TCA 1200
| ||||| |||||||| || ||| |||||| || || || || |||||| ||| | ||
Sbjct 1141 ATGAGCTTGATCAAATCGTGGGACGATCAAGGGCTGTCGAAGAGTCTGACGTGG-TGTCT 1199
Query 1201 CTTCCT-TATCTAACGGCTGTAGTGAAAGAAGTATTGAGGCTTCATCCTCCAGGCCCACT 1259
|| | |||||||||||||| ||||||||||| ||||||||||| || |||||||||||
Sbjct 1200 CTAG-TATATCTAACGGCTGTGGTGAAAGAAGTCTTGAGGCTTCACCCGCCAGGCCCACT 1258
Query 1260 TCTATCATGGGCCCGTTTGGCCATAACAGACACGATCGTTGATGGTCGTCTTGTTCCGGC 1319
|| |||||||||||||| || || |||||||||||| | || ||||||| |||||||||
Sbjct 1259 ACTCTCATGGGCCCGTTTAGCAATCACAGACACGATCATCGACGGTCGTCGTGTTCCGGC 1318
Query 1320 AGGGACCACAGCAATGGTGAACATGTGGGCCGTATCGCAT--GATCCACACGTGTGGGTT 1377
|||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||
Sbjct 1319 GGGGACCACCGCAATGGTGAACATGTGGGC--TATTGCACACGATCCACACGTGTGGGA- 1375
Query 1378 GA-TCCTTTGGAGTTTAAACCTGAGAGGTTC-GTGGCAAAACAAGGTGAGGTGGAGTTTT 1435
|| ||| |||||||||||||| || | ||| || || || |||||||||| ||||| |
Sbjct 1376 GAATCCGTTGGAGTTTAAACCCGA-ACGTTTTGTAGCCAAGGAAGGTGAGGTTGAGTTCT 1434
Query 1436 CAGTTCTCGGGTCGGATTTGAGACTTGCACCGTTCGGGTCGGGTCGTCGGGTTTGCCCCG 1495
| ||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1435 CGGTTCTTGGGTCTGATTTGAGGCTTGCACCGTTCGGGTCCGGTCGTCGGGTTTGCCCCG 1494
Query 1496 GGAAAAATCTTGGTTTGACTACCGTTACGTTTTGGACGGCGGCG-TTGTTACATGAGTTT 1554
|||| |||||||||||||| ||||| ||||||||||| ||| || || || |||||||||
Sbjct 1495 GGAAGAATCTTGGTTTGACCACCGTGACGTTTTGGACTGCGACGCTT-TTGCATGAGTTT 1553
Query 1555 GAATGGG-GAC-C-GTCCGATGGGAACGGC-GTTGACTTATCTGAGAAACTGAGGCTTTC 1610
|||||| ||| | |||||||| ||| | | |||||||| || |||||||||||||| ||
Sbjct 1554 GAATGGCTGACGCCGTCCGATGAGAA-GACCGTTGACTTGTCCGAGAAACTGAGGCTCTC 1612
Query 1611 TTGTGAGATGGCTAATCCTCTTGCTGCTAAATTGCGTCGTAGGCGCAGTT 1660
|||||||||||||||||||||||||||||||| || | ||||||||||
Sbjct 1613 GTGTGAGATGGCTAATCCTCTTGCTGCTAAATTACGCCCCAGGCGCAGTT 1662
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89909176095
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5