BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483877
Length=1888
Score E
Sequences producing significant alignments: (Bits) Value
AT2G47040.1 | Symbols: VGD1 | Plant invertase/pectin methyleste... 1559 0.0
AT2G47030.1 | Symbols: VGDH1 | Plant invertase/pectin methylest... 1552 0.0
AT3G62170.1 | Symbols: VGDH2 | VANGUARD 1 homolog 2 | chr3:2301... 246 5e-64
> AT2G47040.1 | Symbols: VGD1 | Plant invertase/pectin methylesterase
inhibitor superfamily | chr2:19327896-19330197 REVERSE
LENGTH=2215
Length=2215
Score = 1559 bits (844), Expect = 0.0
Identities = 1018/1097 (93%), Gaps = 31/1097 (3%)
Strand=Plus/Plus
Query 1 ACTGGCCCAAGTCATTCAACAACTTGGCTTTTATCTAATAAAGCCCCTCCCTCTCCGATT 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACTGGCCCAAGTCATTCAACAACTTGGCTTTTATCTAATAAAGCCCCTCCCTCTCCGATA 60
Query 61 AACCATTAAATAAAACCGGAGGGAGAGCaaaaaaataaaaacaaaaatatacaaaaccaa 120
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 61 AACC-TTAAATAAAACCGGAGGGAGAGC-AAAAAATAAAAACAAAAATATACAAAAACAA 118
Query 121 aaa-aaaaaatcta-aaaaaaTGATTGGAAAAGTTGTGGTCTCGGTGGCCTCCATCCTCC 178
||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 AAACAAAAAATC-ATAAAAAATGATTGGAAAAGTTGTGGTCTCGGTGGCCTCCATCCTCT 177
Query 179 TAATAGTCGGAGTTGCCATAGGAGTCGTTGCCTTCATAAACAAAAATGGTGATGCTAATC 238
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 178 TAATAGTTGGAGTTGCCATAGGAGTCGTTGCCTACATAAACAAAAATGGTGATGCTAATC 237
Query 239 TGTCTCCGCAAATGAAAGCGGTTCGAGGAATTTGCGAGGCGACTTCCGACAAAGCCTCAT 298
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 238 TGTCTCCCCAAATGAAAGCGGTCCGAGGAATTTGCGAGGCGACTTCCGACAAAGCCTCAT 297
Query 299 GTGTCAAAACTCTCGAGCCGGTCAAGAGCGATGACCCAAACAAGCTAATCAAGGCTTTCA 358
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 298 GTGTCAAAACTCTCGAGCCGGTCAAGAGCGATGACCCAAACAAGCTGATCAAGGCTTTCA 357
Query 359 TGCTCGCTACCAGAGACGCAT-TAA-CCACATCGTCTAACTTCACGGGTCAAACCGAAGT 416
|||||||||||||||| || | ||| ||| ||| || |||||||||||| |||||||||
Sbjct 358 TGCTCGCTACCAGAGATGC-TATAACCCA-ATCATCAAACTTCACGGGTAAAACCGAAGG 415
Query 417 AAACATGGGCTCGAGCATCTCGCCAAACAACAAAGCCGTTCTTGATTACTGCAAGAGAGT 476
|||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 416 AAACTTGGGTTCGGGCATCTCGCCAAACAACAAAGCCGTTCTTGATTACTGCAAGAAAGT 475
Query 477 TTTCATGTACGCGCTTGAGGATCTCAGCACCATTGTTGAGGAAATGGGTGAAGATCTTAA 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 TTTCATGTACGCGCTTGAGGATCTCAGCACCATTGTTGAGGAAATGGGTGAAGATCTTAA 535
Query 537 CCAGATCGGGAGCAAAATCGACCAGCTCAAACAATGGTTAATCGGTGTTTACAATTACCA 596
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 536 CCAGATCGGGAGCAAAATCGACCAGCTTAAACAATGGTTAACCGGTGTTTACAATTACCA 595
Query 597 AACTGATTGTCTTGACGATATCGAAGAAGATGATTTAAGAAAGACGATTGGTGAGGGCAT 656
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 596 AACTGATTGTCTTGACGATATCGAAGAAGATGATTTAAGAAAGACTATTGGAGAGGGCAT 655
Query 657 TGCAAACTCCAAGATTCTCACTACCAACGCTATTGACATCTTCCACAATGTCGTTAGCGC 716
||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 656 TGCAAGCTCCAAGATTCTCACTAGCAACGCTATTGACATCTTCCACACTGTCGTTAGCGC 715
Query 717 CATGGCCAAGCTTAACAACAAGGTTGACGACTTCAAGAACATGACAGGCGGAATC--C-C 773
|||||||||||||||| ||||| || ||||||||||||||||||||||||||| | |
Sbjct 716 CATGGCCAAGCTTAACTTGAAGGTCGAGGACTTCAAGAACATGACAGGCGGAATCTTCGC 775
Query 774 -C----A--C-----------TCCCGACAACAAAGGAGCCCCTCCTGTTGTTGATGAATC 815
| | | ||||| |||||||||| |||||||||||| |||||| ||
Sbjct 776 TCCTTCAGACAAAGGAGCAGCTCCCGTCAACAAAGGAACCCCTCCTGTTGCTGATGATTC 835
Query 816 TCCCGTGGCCGACCCTGATGGTCCTGCTCGTCGTCTTCTTGAAGACATTGACGAGACCGG 875
|||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 836 TCCCGTGGCCGATCCAGATGGTCCTGCTCGCCGTCTTCTTGAAGACATTGACGAGACCGG 895
Query 876 AATCCCAACATGGGTTTCAGGTGCTGACAGGAAGCTCATGGCTAAGGCTGGACGTGGCGG 935
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 896 AATCCCAACATGGGTTTCAGGTGCTGACAGGAAGCTCATGACTAAGGCTGGACGTGGCAG 955
Query 936 TAACGGCGGTGCTG-TAGGATCAGAGCGACCTTTGTGGTGGCTAAGGACGGAAGCGGACA 994
||| | ||||| || |||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 956 TAATGACGGTGGTGCTAGGATCAGAGCAACCTTTGTGGTGGCTAAGGACGGAAGTGGACA 1015
Query 995 GTTTAAGACGGTTCAACAAGCCGTTGATGCTTGTCCTGAGAATAACCCAGGCCGATGCAT 1054
||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||
Sbjct 1016 GTTTAAGACTGTTCAACAAGCCGTTAATGCTTGTCCTGAGAAAAACCCAGGCCGTTGCAT 1075
Query 1055 CATCTACATCAAGGCTG 1071
|||| ||||||||||||
Sbjct 1076 CATCCACATCAAGGCTG 1092
Score = 1118 bits (605), Expect = 0.0
Identities = 750/821 (91%), Gaps = 6/821 (1%)
Strand=Plus/Plus
Query 1071 GAAGAAGAACAACATCTTCATGTTTGGAGATGGTGCAAGAAAGACAGTCATTTCTTACAA 1130
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1124 GAAGAAGAACAACATCTTCATGTTCGGAGATGGTGCAAGAAAGACCGTCATTTCTTACAA 1183
Query 1131 CAGAAGTGTTGCTCTCAGCCGTGGAACCACCACATCCCTTAGTGCCACAGTTCAGGTTGA 1190
|||||||||| ||||||| |||||||||||| |||||||||| |||||| ||||||||
Sbjct 1184 CAGAAGTGTTAAACTCAGCCCTGGAACCACCACTTCCCTTAGTGGCACAGTCCAGGTTGA 1243
Query 1191 ATCGGAAGGATTCATGGCGAAATGGTTGGGATTCAAGAACACCGCCGGTCCAATGGGACA 1250
|| |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||
Sbjct 1244 GTCCGAAGGATTCATGGCAAAATGGATCGGATTCAAGAACACCGCCGGTCCAATGGGACA 1303
Query 1251 CCAAGCCGCGGCTATCCGAGTGAACGGAGACCGGGCCGTGATCTTCAACTGCAGATTCGA 1310
|||||| | ||||||| |||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1304 CCAAGCTGTGGCTATCAGAGTGAACGGAGACCGTGCCGTGATCTTCAACTGCAGGTTCGA 1363
Query 1311 CGGTTACCAAGACACCTTGTACGTGAACAACGGTCGTCAGTTCTACAGAAAC-TGTGTCG 1369
|||||||||||||||||||||||| ||||| ||||||||||||||||||||| | |||||
Sbjct 1364 CGGTTACCAAGACACCTTGTACGTCAACAATGGTCGTCAGTTCTACAGAAACAT-TGTCG 1422
Query 1370 TCTCGGGAACAGTCGACTTCATCTTCGGCAAATCCGCAACTGTGATCCAAAACACACTAA 1429
| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
Sbjct 1423 TGTCAGGAACAGTCGACTTCATCTTCGGCAAATCCGCAACCGTGATCCAAAACTCACTCA 1482
Query 1430 TTGTTGTCCGTAAAGGAAGCAAGGGACAATACAACACGGTCACAGCCGATGGAAACGAAC 1489
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1483 TTGTTGTCCGTAAAGGAAACAAGGGACAATTCAACACGGTCACAGCCGATGGAAACGAAA 1542
Query 1490 TGGGCT-TAGGGATGAAACTTGGTATCGTCCTCCAAAACTGCCGCATCGTTCCCGACAGG 1548
||| | ||| ||||||| | |||||||||||||||||||| |||||||||||||||| |
Sbjct 1543 AGGG-TCTAGCGATGAAAATCGGTATCGTCCTCCAAAACTGTCGCATCGTTCCCGACAAG 1601
Query 1549 AAACTAACGCCAGAGAGATTAACCGTGGCGACATACTTGGGAAGGCCGTGGAAGAAATTC 1608
|||||| || |||||||||||| ||||| | |||||||||||||||| ||||||||||||
Sbjct 1602 AAACTAGCGGCAGAGAGATTAATCGTGGAGTCATACTTGGGAAGGCCATGGAAGAAATTC 1661
Query 1609 TCGACCACCGTGATAATGAGCACCGAGATGGGAGATTTGATTAGACCAGAAGGTTGGAGG 1668
|| ||||||||||| || | | ||||||| |||||| ||||||||||||||||||||| |
Sbjct 1662 TCTACCACCGTGATTATCAACTCCGAGATAGGAGATGTGATTAGACCAGAAGGTTGGAAG 1721
Query 1669 ATTTGGGATGGGGAAAACTACCACATGTCATGTAGGTACGTTGAGTACAACAACCGTGGA 1728
|||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1722 ATTTGGGATGGGGAAAGTTTCCACAAGTCATGTAGGTACGTTGAGTACAACAACCGTGGA 1781
Query 1729 CCAGGAGC-ATTCACTAACCGAAGAGTTAACTGGGCTAAGGTCGCTAGGTCTGCAGGTGA 1787
|||||||| || ||||||||||||||||||||||| |||| |||| |||||||||| |||
Sbjct 1782 CCAGGAGCTAT-CACTAACCGAAGAGTTAACTGGGTTAAGATCGCCAGGTCTGCAGCTGA 1840
Query 1788 GGTCAATGGCTTCACTGTTGCTAACTGGTTAGGTCCTATTTACTGGATTCAACAAGCCAA 1847
|||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 1841 GGTCAATGACTTCACTGTTGCTAACTGGTTAGGTCCTATTAACTGGATTCAAGAAGCCAA 1900
Query 1848 TGTTCCTGTCACGATTGGATTATAAAGTGTATAAATAAAAT 1888
|||||| |||||| ||||||||||| | |||||||| ||||
Sbjct 1901 TGTTCCCGTCACGCTTGGATTATAAGGCGTATAAATCAAAT 1941
> AT2G47030.1 | Symbols: VGDH1 | Plant invertase/pectin methylesterase
inhibitor superfamily | chr2:19324233-19326397 REVERSE
LENGTH=2078
Length=2078
Score = 1552 bits (840), Expect = 0.0
Identities = 1008/1083 (93%), Gaps = 36/1083 (3%)
Strand=Plus/Plus
Query 1 ACTGGCCCAAGTCATTCAACAACTTGGCTTTTATCTAATAAAGCCCCTCCCTCTCCGATT 60
||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct 1 ACTGGCCTAAGTCATTCAACAATTTGGCTTTAATCTAATAAAGCCTCTCCCTCTCCGATT 60
Query 61 AACCATTAAATAAAACCGGAGGGA---GAGCaaaaaaataaaaacaaaaatatacaaaac 117
|||| || |||||| ||||||||| ||| | ||||| | || |||||| | | ||||
Sbjct 61 AACC-TT-AATAAATCCGGAGGGATCGGAG-AGAAAAA-AGAACCAAAAA-A-A-AAAA- 112
Query 118 caaaaaaaaaaatctaaaaaaaTGATTGGAAAAGTTGTGGTCTCGGTGGCCTCCATCCTC 177
|||| | |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 113 -AAAACAGAAAA---AAAAAAATGATTGGAAAAGTTGTGGTCTCGGTGGCCTCCATCCTC 168
Query 178 CTAATAGTCGGAGTTGCCATAGGAGTCGTTGCCTTCATAAACAAAAATGGTGATGCTAAT 237
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 169 TTAATAGTCGGAGTTGCCATAGGAGTCGTTGCCTTCATAAACAAAAATGGCGATGCTAAT 228
Query 238 CTGTCTCCGCAAATGAAAGCGGTTCGAGGAATTTGCGAGGCGACTTCCGACAAAGCCTCA 297
|||||||| |||||||||||||||| |||||||||| || |||| |||||||||||||||
Sbjct 229 CTGTCTCCCCAAATGAAAGCGGTTCAAGGAATTTGCCAGTCGACATCCGACAAAGCCTCA 288
Query 298 TGTGTCAAAACTCTCGAGCCGGTCAAGAGCGATGACCCAAACAAGCTAATCAAGGCTTTC 357
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 289 TGTGTCAAAACTCTCGAGCCGGTCAAGAGCGAGGACCCAAACAAGCTGATCAAGGCTTTC 348
Query 358 ATGCTCGCTACCAGAGACGCATTAACCACATCGTCTAACTTCACGGGTCAAACCGAAGTA 417
||||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 349 ATGCTCGCTACAAAAGACGAATTAACCAAATCGTCTAACTTCACGGGTCAAACCGAAGTA 408
Query 418 AACATGGGCTCGAGCATCTCGCCAAACAACAAAGCCGTTCTTGATTACTGCAAGAGAGTT 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 409 AACATGGGCTCGAGCATCTCGCCAAACAACAAAGCCGTTCTTGATTACTGCAAGAGAGTT 468
Query 478 TTCATGTACGCGCTTGAGGATCTCAGC-ACCATTGTTGAGGAAATGGGTGAAGATCTTAA 536
||||||||||| |||||||||||| || |||||| |||| |||||||||||||||||||
Sbjct 469 TTCATGTACGCTCTTGAGGATCTC-GCTACCATTATTGAAGAAATGGGTGAAGATCTTAG 527
Query 537 CCAGATCGGGAGCAAAATCGACCAGCTCAAACAATGGTTAATCGGTGTTTACAATTACCA 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 528 CCAGATCGGGAGCAAAATCGACCAGCTCAAACAATGGTTAATCGGTGTTTACAATTACCA 587
Query 597 AACTGATTGTCTTGACGATATCGAAGAAGATGATTTAAGAAAGACGATTGGTGAGGGCAT 656
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 588 AACTGATTGTCTTGACGATATCGAAGAAGATGATTTAAGAAAGGCGATTGGTGAGGGCAT 647
Query 657 TGCAAACTCCAAGATTCTCACTACCAACGCTATTGACATCTTCCACAATGTCGTTAGCGC 716
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 648 TGCAAACTCCAAGATTCTCACTACCAACGCTATTGACATCTTCCACACTGTCGTTAGCGC 707
Query 717 CATGGCCAAGCTTAACAACAAGGTTGACGACTTCAAGAACATGACAGGCGGAATCCCCAC 776
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 708 CATGGCCAAGATTAACAACAAGGTTGACGACTTGAAGAACATGACAGGCGGAATCCCCAC 767
Query 777 TCCCGACAACAAAGGAGCCCCTCCTGTTGTTGATGAATCTCCCGTGGCCGACCCTGATGG 836
||||| | ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 768 TCCCG--------G-AGCCCCTCCTGTTGTTGATGAATCTCCCGTGGCCGACCCAGATGG 818
Query 837 TCCTGCTCGTCGTCTTCTTGAAGACATTGACGAGACCGGAATCCCAACATGGGTTTCAGG 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 TCCTGCTCGTCGTCTTCTTGAAGACATTGACGAGACCGGAATCCCAACATGGGTTTCAGG 878
Query 897 TGCTGACAGGAAGCTCATGGCTAAGGCTGGACGTGGCGGTA-A--CGGC-G-GT-G-C-- 947
||||||||||||||||||||||||||||||||||||| ||| | |||| | | | |
Sbjct 879 TGCTGACAGGAAGCTCATGGCTAAGGCTGGACGTGGCCGTAGAGGCGGCCGCGGAGGCGG 938
Query 948 TG-TAGGATCAGAGCGACCTTTGTGGTGGCTAAGGACGGAAGCGGACAGTTTAAGACGGT 1006
|| |||| ||||| ||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 939 TGCTAGGGTCAGAACGAACTTTGTGGTGGCTAAGGATGGAAGCGGACAGTTTAAGACGGT 998
Query 1007 TCAACAAGCCGTTGATGCTTGTCCTGAGAATAACCCAGGCCGATGCATCATCTACATCAA 1066
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 999 TCAACAAGCCGTTGATGCTTGTCCTGAGAATAACCGAGGCCGATGCATCATCTACATCAA 1058
Query 1067 GGC 1069
|||
Sbjct 1059 GGC 1061
Score = 1304 bits (706), Expect = 0.0
Identities = 771/803 (96%), Gaps = 2/803 (0%)
Strand=Plus/Plus
Query 1071 GAAGAAGAACAACATCTTCATGTTTGGAGATGGTGCAAGAAAGACAGTCATTTCTTACAA 1130
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1095 GAAGAAGAACAACATCTTCATGTTTGGAGATGGTGCAAGAAAGACCGTCATTTCTTACAA 1154
Query 1131 CAGAAGTGTTGCTCTCAGCCGTGGAACCACCACATCCCTTAGTGCCACAGTTCAGGTTGA 1190
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1155 CAGAAGTGTTGCTCTCAGCCGTGGAACCACCACATCCCTCAGTGCCACAGTTCAGGTTGA 1214
Query 1191 ATCGGAAGGATTCATGGCGAAATGGTTGGGATTCAAGAACACCGCCGGTCCAATGGGACA 1250
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1215 ATCGGAAGGATTCATGGCGAAATGGATGGGATTCAAGAACACCGCCGGTCCAATGGGACA 1274
Query 1251 CCAAGCCGCGGCTATCCGAGTGAACGGAGACCGGGCCGTGATCTTCAACTGCAGATTCGA 1310
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1275 CCAAGCCGCGGCTATCCGAGTGAACGGAGACCGTGCCGTGATCTTCAACTGCAGATTCGA 1334
Query 1311 CGGTTACCAAGACACCTTGTACGTGAACAACGGTCGTCAGTTCTACAGAAACTGTGTCGT 1370
|||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1335 CGGTTATCAAGACACATTGTACGTTAACAACGGTCGTCAGTTCTACAGAAACTGTGTGGT 1394
Query 1371 CTCGGGAACAGTCGACTTCATCTTCGGCAAATCCGCAACTGTGATCCAAAACACACTAAT 1430
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1395 CTCGGGAACAGTAGACTTCATCTTCGGCAAATCCGCAACCGTGATCCAAAACACACTAAT 1454
Query 1431 TGTTGTCCGTAAAGGAAGCAAGGGACAATACAACACGGTCACAGCCGATGGAAACGAACT 1490
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1455 TGTTGTCCGTAAAGGAAGCAAGGGACAATACAACACGGTCACAGCCGATGGAAACGAATT 1514
Query 1491 GGGCTTAGGGATGAAACTTGGTATCGTCCTCCAAAACTGCCGCATCGTTCCCGACAGGAA 1550
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1515 GGGCTTAGGGATGAAAATTGGTATCGTCCTCCAAAACTGCCGCATCGTGCCCGACAGGAA 1574
Query 1551 ACTAACGCCAGAGAGA-TTAACCGTGGCGACATACTTGGGAAGGCCGTGGAAGAAATTCT 1609
|||||||||||||||| || || |||||||||||||||||||||||||||||||||||||
Sbjct 1575 ACTAACGCCAGAGAGACTT-ACGGTGGCGACATACTTGGGAAGGCCGTGGAAGAAATTCT 1633
Query 1610 CGACCACCGTGATAATGAGCACCGAGATGGGAGATTTGATTAGACCAGAAGGTTGGAGGA 1669
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 1634 CGACCACCGTGATAATGAGCACCGAGATGGGAGATTTGATTAGACCAGAAGGGTGGAAGA 1693
Query 1670 TTTGGGATGGGGAAAACTACCACATGTCATGTAGGTACGTTGAGTACAACAACCGTGGAC 1729
||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1694 TTTGGGATGGGGAAAGTTTCCACAAGTCATGTAGGTACGTTGAGTACAACAACCGTGGAC 1753
Query 1730 CAGGAGCATTCACTAACCGAAGAGTTAACTGGGCTAAGGTCGCTAGGTCTGCAGGTGAGG 1789
||||||||||| ||||| |||||||||||||||||||||| || |||||||||| |||||
Sbjct 1754 CAGGAGCATTCGCTAACAGAAGAGTTAACTGGGCTAAGGTTGCCAGGTCTGCAGCTGAGG 1813
Query 1790 TCAATGGCTTCACTGTTGCTAACTGGTTAGGTCCTATTTACTGGATTCAACAAGCCAATG 1849
||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1814 TCAATGGCTTCACAGCTGCTAACTGGTTAGGTCCTATTAACTGGATTCAAGAAGCCAATG 1873
Query 1850 TTCCTGTCACGATTGGATTATAA 1872
|||||||||| ||||||||||||
Sbjct 1874 TTCCTGTCACAATTGGATTATAA 1896
> AT3G62170.1 | Symbols: VGDH2 | VANGUARD 1 homolog 2 | chr3:23016223-23018509
REVERSE LENGTH=2211
Length=2211
Score = 246 bits (133), Expect = 5e-64
Identities = 372/485 (77%), Gaps = 26/485 (5%)
Strand=Plus/Plus
Query 252 GAAAGCGGTTCGAG-GAATTTGCGAGGCGACTTCCGACAAAGCCTCATGTGTC-AAAACT 309
||||||||||| || ||||||| || | || | ||| ||| || || | | |||||
Sbjct 307 GAAAGCGGTTC-AGACAATTTGCCAGTCAACCACAGACCAAGGTTCGTGCG-CGAAAACA 364
Query 310 CTCGAGCCGGTCAAGAGCGATGACCCAAACAAGCTAATCAAGGCTTTCATGCTCGCTACC 369
||||| || ||||| || ||||| |||| |||||| |||| || ||| || | |||||
Sbjct 365 CTCGACCCAGTCAAAAGTGATGATCCAAGCAAGCTTGTCAAAGCCTTCCTGATGGCTACT 424
Query 370 AGAGACGC-ATTAACCACATCGTCTAACTTCACGG-GTCAAACCGAAGTAAACATGGGCT 427
| |||||| | | || | ||| || |||||||||| || ||||||| | ||||| |
Sbjct 425 AAAGACGCGA-TCACAAAATCCTCAAACTTCACGGCTTC-GACCGAAGGAGGTATGGG-T 481
Query 428 -CGAGCAT-CTCGCCAAACAACAAAGCCGTTCTTGATTACTGCAAGAGAGTTTTCATGTA 485
| | ||| || | | || |||||||||||||||||||||||||||||| || |||||
Sbjct 482 ACTAACATGAACG-CGACCAGCAAAGCCGTTCTTGATTACTGCAAGAGAGTATTGATGTA 540
Query 486 CGCGCTTGAGGATCTC-AGCACCATTGTTGAGGAAATGGGTGAAGATCTTAACCAGA-TC 543
||| ||||||||||| || ||||||||||| || |||||||| |||||| | |||| |
Sbjct 541 CGCTCTTGAGGATCTTGAG-ACCATTGTTGAAGAGATGGGTGAGGATCTTCAGCAGAGT- 598
Query 544 GGGAGCAAAA-TCGACCAGCTCAAACAATGGTTAA-TCGGTGTTTACAATTACCAAACTG 601
|| | | || | |||||||||||||||||||||| | || |||| ||| |||||||| |
Sbjct 599 GGAA-CTAAGCTTGACCAGCTCAAACAATGGTTAACT-GGAGTTTTCAACTACCAAACCG 656
Query 602 ATTGTCTTGACGATATCGAAGAAGATGATTTAA-GAAAGA-CGATTGGTGAGGGCAT-TG 658
||||||||||||| ||||| |||| ||| ||| ||| || | || ||||| || || |
Sbjct 657 ATTGTCTTGACGACATCGAGGAAGTTGAGCTAAAGAA-GATC-ATGGGTGAAGGAATCT- 713
Query 659 CAAACTCCAAGATTCTCACTACCAACGCTATTGACATCTTCCACAATGTCGTTAGCGCCA 718
| ||||||||| || | || | |||||||| || |||||||| || |||| ||| |
Sbjct 714 CTAACTCCAAGGTTTTGACCAGTAACGCTATCGATATCTTCCATTCCGTTGTTACCGCGA 773
Query 719 TGGCC 723
|||||
Sbjct 774 TGGCC 778
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93473414790
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5