BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg483878 Length=938 Score E Sequences producing significant alignments: (Bits) Value AT2G47050.1 | Symbols: | Plant invertase/pectin methylesterase... 1522 0.0 > AT2G47050.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr2:19331685-19332646 REVERSE LENGTH=962 Length=962 Score = 1522 bits (824), Expect = 0.0 Identities = 917/958 (96%), Gaps = 22/958 (2%) Strand=Plus/Plus Query 1 AATCTATTCCTTTCCAATCCACGTCCaaaaaacaaaacc--------aaaaaaaaaaaga 52 |||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 AATCCATTCCTTTCCAATCCACGTCCAAAAAACAAAACCAAAAAAAAAAAAAAAAAAAGA 60 Query 53 caaaaaaaaaaTGAACACTCCAATAAAACTCGCCTTTCTCATTCTCTGCATTGCCCTAAC 112 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 C-AAAAAAAAATGAACACTCCAATAAAACTCGCCTTTCTCATTCTCTGCATTGCCCTAAC 119 Query 113 CGCAACCGCATTTGTAGTCCCACCAAAACGTGACGCCGTTTCACCAAACCACCAAAAAGC 172 ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 120 CGCAACCGCATTTATAGTCCCAGCAAAACGTGACGCCGTTTCACCACACCACCAAAAAGC 179 Query 173 CGTCGATGGAATCTGCAGCGTTGTGCAAGACAAACGTCTATGTAGCATTACCCTAAGAAA 232 |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 180 CGTCGATGGAATCTGCAGCGTTGTGCAAGACAAACGTCTATGCAGCATTACCTTAAGAAA 239 Query 233 CGTCCCAAGCGATGATCCCGCCGTTTTGGTCCGTTACTTAGCCACGGCAGCAGAAGCGTC 292 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 240 CGTCCCAAGCGATGATCCCGCCGTTTTGGTTCGTTACTTAGCCACGGCAGCAGAAGCGTC 299 Query 293 CGTTAAAAAGGGTTTGAAATTCCTCGCCGGAATCAAACCAAAATACAAAGGAAACGCCTT 352 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 300 CGTTAAAAAGGGTTTGAAGTTCCTCTCCGGAATCAAACCAAAATACAAAGGAAACGCCTT 359 Query 353 CGCCACAACATGCATCACCGGCTGCGAGAAACAGCTACACAACGCCTTAGACGACTTTGC 412 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 360 CGCCACAACATGCATCACCGGCTGCGAGAAACAGCTACACAACGCCTTGGACGACTTTGC 419 Query 413 AGATTTCTGGAAAGCCGCAGGAAAAAACCTAACGAGCATGGCTGAGAATTACTTCACATG 472 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 420 AGATTTCTGGAAAGCCGCAGGAAAAAATCTAACGAGCATGGCTGAGAATTACTTCACATG 479 Query 473 TAAGAAGAAGATGACTTCCATCTTCACTTACCATTCCACTTGTCTCGATGACATTTACGA 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 TAAGAAGAAGATGACTTCCATCTTCACTTACCATTCCACTTGTCTCGATGACATTTACGA 539 Query 533 CAAGACGTTGCACAAGGTGGTCGAAGGAGGAATTGGGCTTGGGAAAAGAATGAGTGGTGA 592 ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 540 CAAGACGTTGCACAAAGTGGTCGAAGGAGGGATTGGCCTTGGGAAAAGAATGAGTGGTGA 599 Query 593 GTCTGTGGATGTGTTCGCTGGAATGGGCAAAGTCTTTAACACTTTCAACATTAAGACCAA 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 GTCTGTGGATGTGTTCGCTGGAATGGGCAAAGTCTTTAACACTTTCAACATTAAGACCAA 659 Query 653 ACTTAACCAGAAAGATACCGACACGTTGCTCCCACCGCCTTTGTCCTTTTACTACTATTG 712 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 660 ACTTAACCAGAAAGATACCGACACGTTGCTCCCACCACCTTTGTCCTTTTACTACTATTG 719 Query 713 ATTTTATTTATCAatatatattatatat-a-AAA-----------TGTACTGCTTCGGTC 759 |||||||||||||||||||||||||||| | ||| ||||||||||||||| Sbjct 720 ATTTTATTTATCAATATATATTATATATCATAAAACACAACAAAATGTACTGCTTCGGTC 779 Query 760 GATGGTGATGAATAATTTGCATCGATTGGGTTTTCAGATATTTTGGGGATCTTGTAACCA 819 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 780 GATGGTGATGAATAATTTTCATCGATTGGGTTTTCAGATATTTTGGGGATCTTGTAACCA 839 Query 820 AAGGTTCCTTTTGATGTATGTTTGTAATTAATATGTTATGGATTATAATCATGTATGGAC 879 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 840 AAGGTTCCTTTTGATGTATGTTTGTATTTAATATGTTATGGATTATAATCATGTATGGAC 899 Query 880 CTCGTGATTGGAAAGGATATGGAATAATGTGATTATCCAGTAATAAAAACGTAATTAA 937 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 900 CTCGTGATTGGAAAGGATATGGAATAATGTGATTATCTAATAATAAAAACGTAATTAA 957 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45863776211 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5